RNA–Protein interactions for RNA: ENST00000425537.1

HMGB4-201, Transcript of high mobility group box 4, humanhuman

TSL 1 (best)

Gene HMGB4, Length 630 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4-201ENST00000425537 C2orf70A6NJV1 201 aa7.16□□□□□ -1.26
HMGB4-201ENST00000425537 PRAC2D3DTV9 90 aa7.16□□□□□ -1.26
HMGB4-201ENST00000425537 DUSP14O95147 198 aaKnown RBP7.16□□□□□ -1.26
HMGB4-201ENST00000425537 CAMPP49913 170 aa7.16□□□□□ -1.26
HMGB4-201ENST00000425537 CRIP1P50238 77 aa7.16□□□□□ -1.26
HMGB4-201ENST00000425537 LINC01559Q495D7 138 aa7.16□□□□□ -1.26
HMGB4-201ENST00000425537 EBLN2Q6P2I7 272 aa7.16□□□□□ -1.26
HMGB4-201ENST00000425537 FER1L6-AS1Q8NA97 138 aa7.16□□□□□ -1.26
HMGB4-201ENST00000425537 OR11H1Q8NG94 326 aa7.16□□□□□ -1.26
HMGB4-201ENST00000425537 OR8A1Q8NGG7 326 aa7.16□□□□□ -1.26
HMGB4-201ENST00000425537 GTSF1Q8WW33 167 aa7.16□□□□□ -1.26
HMGB4-201ENST00000425537 TSSC4Q9Y5U2 329 aaPredicted RBP7.16□□□□□ -1.26
HMGB4-201ENST00000425537 TRAV21A0A0B4J279 112 aa7.15□□□□□ -1.26
HMGB4-201ENST00000425537 TSPOP30536 169 aa7.15□□□□□ -1.26
HMGB4-201ENST00000425537 LEPP41159 167 aa7.15□□□□□ -1.26
HMGB4-201ENST00000425537 TCTEX1D4Q5JR98 221 aa7.15□□□□□ -1.26
HMGB4-201ENST00000425537 LINC00518Q8N0U6 118 aa7.15□□□□□ -1.26
HMGB4-201ENST00000425537 GATD1Q8NB37 220 aa7.15□□□□□ -1.26
HMGB4-201ENST00000425537 OR9G4Q8NGQ1 327 aa7.15□□□□□ -1.26
HMGB4-201ENST00000425537 DYNLRB2Q8TF09 96 aa7.15□□□□□ -1.26
HMGB4-201ENST00000425537 ODF3Q96PU9 254 aa7.15□□□□□ -1.26
HMGB4-201ENST00000425537 MS4A6AQ9H2W1 248 aa7.15□□□□□ -1.26
HMGB4-201ENST00000425537 ESM1Q9NQ30 184 aa7.15□□□□□ -1.26
HMGB4-201ENST00000425537 NSD1Q96L73 2696 aaPredicted RBP7.14□□□□□ -1.27
HMGB4-201ENST00000425537 IGKV3-7A0A075B6H7 116 aa7.14□□□□□ -1.27
HMGB4-201ENST00000425537 TRAV25A0A0B4J276 109 aa7.14□□□□□ -1.27
HMGB4-201ENST00000425537 K7EQG2 157 aa7.14□□□□□ -1.27
HMGB4-201ENST00000425537 GPX1P07203 203 aa7.14□□□□□ -1.27
HMGB4-201ENST00000425537 ESDP10768 282 aa7.14□□□□□ -1.27
HMGB4-201ENST00000425537 CTRLP40313 264 aa7.14□□□□□ -1.27
HMGB4-201ENST00000425537 SMIM15Q7Z3B0 74 aa7.14□□□□□ -1.27
HMGB4-201ENST00000425537 DCANP1Q8TF63 244 aa7.14□□□□□ -1.27
HMGB4-201ENST00000425537 C20orf173Q96LM9 149 aa7.14□□□□□ -1.27
HMGB4-201ENST00000425537 PACRGQ96M98 296 aaPredicted RBP7.14□□□□□ -1.27
HMGB4-201ENST00000425537 TPPP3Q9BW30 176 aa7.14□□□□□ -1.27
HMGB4-201ENST00000425537 GPR61Q9BZJ8 451 aa7.14□□□□□ -1.27
HMGB4-201ENST00000425537 MTORP42345 2549 aa7.13□□□□□ -1.27
HMGB4-201ENST00000425537 A0A1B0GUS0 222 aa7.13□□□□□ -1.27
HMGB4-201ENST00000425537 TCF21O43680 179 aa7.13□□□□□ -1.27
HMGB4-201ENST00000425537 GZMBP10144 247 aa7.13□□□□□ -1.27
HMGB4-201ENST00000425537 FABP4P15090 132 aa7.13□□□□□ -1.27
HMGB4-201ENST00000425537 SRIP30626 198 aa7.13□□□□□ -1.27
HMGB4-201ENST00000425537 ZNF80P51504 273 aaPredicted RBP7.13□□□□□ -1.27
HMGB4-201ENST00000425537 SLURP1P55000 103 aa7.13□□□□□ -1.27
HMGB4-201ENST00000425537 CMC4P56277 68 aaPredicted RBP7.13□□□□□ -1.27
HMGB4-201ENST00000425537 CACNG7P62955 275 aa7.13□□□□□ -1.27
HMGB4-201ENST00000425537 DNLZQ5SXM8 178 aa7.13□□□□□ -1.27
HMGB4-201ENST00000425537 LYZL1Q6UWQ5 148 aa7.13□□□□□ -1.27
HMGB4-201ENST00000425537 WFDC3Q8IUB2 231 aa7.13□□□□□ -1.27
HMGB4-201ENST00000425537 LINC01006Q8NI28 216 aa7.13□□□□□ -1.27
HMGB4-201ENST00000425537 C12orf57Q99622 126 aa7.13□□□□□ -1.27
HMGB4-201ENST00000425537 TMSB15BA0A087X1C1 80 aa7.12□□□□□ -1.27
HMGB4-201ENST00000425537 LOC102724200A0A096LPH7 203 aaPredicted RBP7.12□□□□□ -1.27
HMGB4-201ENST00000425537 OR4C46A6NHA9 309 aa7.12□□□□□ -1.27
HMGB4-201ENST00000425537 ARMS2P0C7Q2 107 aa7.12□□□□□ -1.27
HMGB4-201ENST00000425537 IGLC6P0CF74 106 aa7.12□□□□□ -1.27
HMGB4-201ENST00000425537 MED14OSP0DP75 135 aa7.12□□□□□ -1.27
HMGB4-201ENST00000425537 SLAQ13239 276 aa7.12□□□□□ -1.27
HMGB4-201ENST00000425537 PDZD11Q5EBL8 140 aa7.12□□□□□ -1.27
HMGB4-201ENST00000425537 PSMG4Q5JS54 123 aa7.12□□□□□ -1.27
HMGB4-201ENST00000425537 FOXI2Q6ZQN5 318 aa7.12□□□□□ -1.27
HMGB4-201ENST00000425537 ZNF493Q6ZR52 646 aa7.12□□□□□ -1.27
HMGB4-201ENST00000425537 APRG1Q8IVJ8 170 aa7.12□□□□□ -1.27
HMGB4-201ENST00000425537 OR10D4PQ8NGN7 298 aa7.12□□□□□ -1.27
HMGB4-201ENST00000425537 KCNS1Q96KK3 526 aa7.12□□□□□ -1.27
HMGB4-201ENST00000425537 HIST1H2BLQ99880 126 aa7.12□□□□□ -1.27
HMGB4-201ENST00000425537 ALKBH7Q9BT30 221 aaPredicted RBP7.12□□□□□ -1.27
HMGB4-201ENST00000425537 SAMD10Q9BYL1 202 aa7.12□□□□□ -1.27
HMGB4-201ENST00000425537 SIGLEC8Q9NYZ4 499 aa7.12□□□□□ -1.27
HMGB4-201ENST00000425537 RNF114Q9Y508 228 aa7.12□□□□□ -1.27
HMGB4-201ENST00000425537 A0A0J9YX75 114 aa7.11□□□□□ -1.27
HMGB4-201ENST00000425537 GRIFINA4D1Z8 144 aa7.11□□□□□ -1.27
HMGB4-201ENST00000425537 CCL24O00175 119 aa7.11□□□□□ -1.27
HMGB4-201ENST00000425537 AMBPP02760 352 aa7.11□□□□□ -1.27
HMGB4-201ENST00000425537 ZNF688P0C7X2 276 aa7.11□□□□□ -1.27
HMGB4-201ENST00000425537 RAB4AP20338 218 aa7.11□□□□□ -1.27
HMGB4-201ENST00000425537 TFPI2P48307 235 aa7.11□□□□□ -1.27
HMGB4-201ENST00000425537 TWIST1Q15672 202 aa7.11□□□□□ -1.27
HMGB4-201ENST00000425537 DEFB136Q30KP8 78 aa7.11□□□□□ -1.27
HMGB4-201ENST00000425537 KIAA1644Q3SXP7 199 aa7.11□□□□□ -1.27
HMGB4-201ENST00000425537 GFI1BQ5VTD9 330 aa7.11□□□□□ -1.27
HMGB4-201ENST00000425537 ZFAND2AQ8N6M9 145 aa7.11□□□□□ -1.27
HMGB4-201ENST00000425537 FAM19A4Q96LR4 140 aa7.11□□□□□ -1.27
HMGB4-201ENST00000425537 CNFNQ9BYD5 112 aa7.11□□□□□ -1.27
HMGB4-201ENST00000425537 SERF1AO75920 110 aa7.1□□□□□ -1.27
HMGB4-201ENST00000425537 PPBPP02775 128 aa7.1□□□□□ -1.27
HMGB4-201ENST00000425537 OR5AL1P0C617 328 aa7.1□□□□□ -1.27
HMGB4-201ENST00000425537 FRMD6-AS1P0C7T7 363 aa7.1□□□□□ -1.27
HMGB4-201ENST00000425537 CD28P10747 220 aa7.1□□□□□ -1.27
HMGB4-201ENST00000425537 PMCHP20382 165 aa7.1□□□□□ -1.27
HMGB4-201ENST00000425537 S100A4P26447 101 aaKnown RBP7.1□□□□□ -1.27
HMGB4-201ENST00000425537 ASIPP42127 132 aa7.1□□□□□ -1.27
HMGB4-201ENST00000425537 FHL3Q13643 280 aa7.1□□□□□ -1.27
HMGB4-201ENST00000425537 GDF5OSQ5U4N7 250 aa7.1□□□□□ -1.27
HMGB4-201ENST00000425537 C18orf32Q8TCD1 76 aa7.1□□□□□ -1.27
HMGB4-201ENST00000425537 DLX4Q92988 240 aaPredicted RBP7.1□□□□□ -1.27
HMGB4-201ENST00000425537 CHCHD1Q96BP2 118 aaKnown RBP7.1□□□□□ -1.27
HMGB4-201ENST00000425537 SPAG8Q99932 426 aaPredicted RBP7.1□□□□□ -1.27
HMGB4-201ENST00000425537 SSBP4Q9BWG4 385 aaPredicted RBP7.1□□□□□ -1.27
HMGB4-201ENST00000425537 TMEM191AQ9H0A3 160 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms