RNA–Protein interactions for RNA: ENST00000424059.1

PMS1-209, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 2,004 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-209ENST00000424059 FAM19A2Q8N3H0 131 aa2.09□□□□□ -2.07
PMS1-209ENST00000424059 STRCP1A6NGW2 1772 aa2.09□□□□□ -2.07
PMS1-209ENST00000424059 ZNF236Q9UL36 1845 aa2.09□□□□□ -2.07
PMS1-209ENST00000424059 MIA3Q5JRA6 1907 aa2.09□□□□□ -2.07
PMS1-209ENST00000424059 MAST2Q6P0Q8 1798 aa2.08□□□□□ -2.08
PMS1-209ENST00000424059 LY75O60449 1722 aa2.08□□□□□ -2.08
PMS1-209ENST00000424059 DDX60Q8IY21 1712 aaKnown RBP2.08□□□□□ -2.08
PMS1-209ENST00000424059 RREB1Q92766 1687 aa2.08□□□□□ -2.08
PMS1-209ENST00000424059 ADAMTS7Q9UKP4 1686 aa2.08□□□□□ -2.08
PMS1-209ENST00000424059 IGKV1-27A0A075B6S5 117 aa2.08□□□□□ -2.08
PMS1-209ENST00000424059 IGKV1-8A0A0C4DH67 115 aa2.08□□□□□ -2.08
PMS1-209ENST00000424059 A0A0J9YXV3 536 aa2.08□□□□□ -2.08
PMS1-209ENST00000424059 C19orf71A6NCJ1 209 aa2.08□□□□□ -2.08
PMS1-209ENST00000424059 ACYP1P07311 99 aa2.08□□□□□ -2.08
PMS1-209ENST00000424059 CXCL8P10145 99 aa2.08□□□□□ -2.08
PMS1-209ENST00000424059 AQP1P29972 269 aa2.08□□□□□ -2.08
PMS1-209ENST00000424059 GCHFRP30047 84 aa2.08□□□□□ -2.08
PMS1-209ENST00000424059 DYNLT3P51808 116 aa2.08□□□□□ -2.08
PMS1-209ENST00000424059 ATP5EP56381 51 aaPredicted RBP2.08□□□□□ -2.08
PMS1-209ENST00000424059 UBE2D3P61077 147 aa2.08□□□□□ -2.08
PMS1-209ENST00000424059 UBE2D2P62837 147 aa2.08□□□□□ -2.08
PMS1-209ENST00000424059 ZNF56Q15929 161 aa2.08□□□□□ -2.08
PMS1-209ENST00000424059 FBXL19-AS1Q494R0 122 aa2.08□□□□□ -2.08
PMS1-209ENST00000424059 TMEM170BQ5T4T1 132 aa2.08□□□□□ -2.08
PMS1-209ENST00000424059 LINC00242Q5T6M2 205 aa2.08□□□□□ -2.08
PMS1-209ENST00000424059 C12orf73Q69YU5 71 aa2.08□□□□□ -2.08
PMS1-209ENST00000424059 LINC00643Q86TS7 51 aa2.08□□□□□ -2.08
PMS1-209ENST00000424059 ZNRF1Q8ND25 227 aa2.08□□□□□ -2.08
PMS1-209ENST00000424059 ZNF563Q8TA94 476 aa2.08□□□□□ -2.08
PMS1-209ENST00000424059 WFDC5Q8TCV5 224 aa2.08□□□□□ -2.08
PMS1-209ENST00000424059 DIRC1Q969H9 104 aa2.08□□□□□ -2.08
PMS1-209ENST00000424059 SMIM7Q9BQ49 75 aa2.08□□□□□ -2.08
PMS1-209ENST00000424059 XCL2Q9UBD3 114 aa2.08□□□□□ -2.08
PMS1-209ENST00000424059 EPDR1Q9UM22 224 aa2.08□□□□□ -2.08
PMS1-209ENST00000424059 SMAD5-AS1Q9Y6J3 95 aa2.08□□□□□ -2.08
PMS1-209ENST00000424059 PTPRDP23468 1912 aa2.08□□□□□ -2.08
PMS1-209ENST00000424059 RALGAPA2Q2PPJ7 1873 aa2.08□□□□□ -2.08
PMS1-209ENST00000424059 CPAMD8Q8IZJ3 1885 aa2.08□□□□□ -2.08
PMS1-209ENST00000424059 LOC285556D6RIA3 1793 aa2.08□□□□□ -2.08
PMS1-209ENST00000424059 IGLV3-10A0A075B6K4 115 aa2.08□□□□□ -2.08
PMS1-209ENST00000424059 TCRBV4S1A1TA0A5B7 111 aa2.08□□□□□ -2.08
PMS1-209ENST00000424059 A6NN06 94 aa2.08□□□□□ -2.08
PMS1-209ENST00000424059 IGLV3-27P01718 113 aa2.08□□□□□ -2.08
PMS1-209ENST00000424059 IGHV3-9P01782 118 aa2.08□□□□□ -2.08
PMS1-209ENST00000424059 RNASE4P34096 147 aaKnown RBP2.08□□□□□ -2.08
PMS1-209ENST00000424059 SYNJ2BPP57105 145 aa2.08□□□□□ -2.08
PMS1-209ENST00000424059 GFRALQ6UXV0 394 aa2.08□□□□□ -2.08
PMS1-209ENST00000424059 C16orf47Q6ZP98 133 aaPredicted RBP2.08□□□□□ -2.08
PMS1-209ENST00000424059 C7orf65Q6ZTY9 151 aa2.08□□□□□ -2.08
PMS1-209ENST00000424059 C6orf201Q7Z4U5 140 aa2.08□□□□□ -2.08
PMS1-209ENST00000424059 KRTAP7-1Q8IUC3 87 aa2.08□□□□□ -2.08
PMS1-209ENST00000424059 FAM218AQ96MZ4 157 aa2.08□□□□□ -2.08
PMS1-209ENST00000424059 TMEM243Q9BU79 118 aa2.08□□□□□ -2.08
PMS1-209ENST00000424059 SPRR3Q9UBC9 169 aa2.08□□□□□ -2.08
PMS1-209ENST00000424059 LY96Q9Y6Y9 160 aa2.08□□□□□ -2.08
PMS1-209ENST00000424059 ANAPC1Q9H1A4 1944 aa2.08□□□□□ -2.08
PMS1-209ENST00000424059 DDX60LQ5H9U9 1706 aaKnown RBP2.08□□□□□ -2.08
PMS1-209ENST00000424059 TNKS1BP1Q9C0C2 1729 aaKnown RBP2.08□□□□□ -2.08
PMS1-209ENST00000424059 NINQ8N4C6 2090 aa2.07□□□□□ -2.08
PMS1-209ENST00000424059 PTPRBP23467 1997 aa2.07□□□□□ -2.08
PMS1-209ENST00000424059 KIAA1549Q9HCM3 1950 aa2.07□□□□□ -2.08
PMS1-209ENST00000424059 NYNRINQ9P2P1 1898 aaKnown RBP2.07□□□□□ -2.08
PMS1-209ENST00000424059 IGHV3OR15-7A0A075B7D8 119 aa2.07□□□□□ -2.08
PMS1-209ENST00000424059 PMS2P5A8MQ11 134 aa2.07□□□□□ -2.08
PMS1-209ENST00000424059 NPYP01303 97 aa2.07□□□□□ -2.08
PMS1-209ENST00000424059 RNASE2P10153 161 aaKnown RBP2.07□□□□□ -2.08
PMS1-209ENST00000424059 MFAP2P55001 183 aa2.07□□□□□ -2.08
PMS1-209ENST00000424059 PCBD1P61457 104 aa2.07□□□□□ -2.08
PMS1-209ENST00000424059 UBE2BP63146 152 aa2.07□□□□□ -2.08
PMS1-209ENST00000424059 ADIGQ0VDE8 80 aa2.07□□□□□ -2.08
PMS1-209ENST00000424059 LINC01554Q52M75 96 aa2.07□□□□□ -2.08
PMS1-209ENST00000424059 FAM104BQ5XKR9 115 aa2.07□□□□□ -2.08
PMS1-209ENST00000424059 ZNF584Q8IVC4 421 aa2.07□□□□□ -2.08
PMS1-209ENST00000424059 NKAPP1Q8N9T2 125 aa2.07□□□□□ -2.08
PMS1-209ENST00000424059 ZNF524Q96C55 264 aa2.07□□□□□ -2.08
PMS1-209ENST00000424059 ABHD14BQ96IU4 210 aa2.07□□□□□ -2.08
PMS1-209ENST00000424059 LITAFQ99732 161 aa2.07□□□□□ -2.08
PMS1-209ENST00000424059 SLC50A1Q9BRV3 221 aa2.07□□□□□ -2.08
PMS1-209ENST00000424059 NHP2Q9NX24 153 aaKnown RBP2.07□□□□□ -2.08
PMS1-209ENST00000424059 IL36BQ9NZH7 164 aa2.07□□□□□ -2.08
PMS1-209ENST00000424059 SNRNP200O75643 2136 aaKnown RBP2.07□□□□□ -2.08
PMS1-209ENST00000424059 ATG2BQ96BY7 2078 aa2.07□□□□□ -2.08
PMS1-209ENST00000424059 MYMXA0A1B0GTQ4 84 aa2.07□□□□□ -2.08
PMS1-209ENST00000424059 H7BZZ5 65 aa2.07□□□□□ -2.08
PMS1-209ENST00000424059 LTAP01374 205 aa2.07□□□□□ -2.08
PMS1-209ENST00000424059 CCL4P13236 92 aa2.07□□□□□ -2.08
PMS1-209ENST00000424059 ZNF138P52744 262 aa2.07□□□□□ -2.08
PMS1-209ENST00000424059 BLCAPP62952 87 aa2.07□□□□□ -2.08
PMS1-209ENST00000424059 CXCL6P80162 114 aa2.07□□□□□ -2.08
PMS1-209ENST00000424059 ZNF678Q5SXM1 525 aa2.07□□□□□ -2.08
PMS1-209ENST00000424059 LCE3CQ5T5A8 94 aa2.07□□□□□ -2.08
PMS1-209ENST00000424059 MDP1Q86V88 176 aa2.07□□□□□ -2.08
PMS1-209ENST00000424059 SLC25A29Q8N8R3 303 aa2.07□□□□□ -2.08
PMS1-209ENST00000424059 LINC01555Q8NAE3 123 aa2.07□□□□□ -2.08
PMS1-209ENST00000424059 MAPK1IP1LQ8NDC0 245 aa2.07□□□□□ -2.08
PMS1-209ENST00000424059 ZNF71Q9NQZ8 489 aaPredicted RBP2.07□□□□□ -2.08
PMS1-209ENST00000424059 ZNF706Q9Y5V0 76 aaPredicted RBP2.07□□□□□ -2.08
PMS1-209ENST00000424059 DEPDC5O75140 1603 aa2.06□□□□□ -2.08
PMS1-209ENST00000424059 PAPPAQ13219 1627 aa2.06□□□□□ -2.08
PMS1-209ENST00000424059 ARHGAP21Q5T5U3 1957 aa2.06□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms