RNA–Protein interactions for RNA: ENST00000422392.6

CDH1-202, Transcript of cadherin 1, humanhuman

TSL 1 (best) BASIC

Gene CDH1, Length 2,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-202ENST00000422392 LINC01559Q495D7 138 aa12.14□□□□□ -0.47
CDH1-202ENST00000422392 BPESC1Q9GZL8 116 aa12.14□□□□□ -0.47
CDH1-202ENST00000422392 TM4SF20Q53R12 229 aa12.14□□□□□ -0.47
CDH1-202ENST00000422392 OR1N2Q8NGR9 330 aa12.14□□□□□ -0.47
CDH1-202ENST00000422392 J3KRW8 73 aa12.13□□□□□ -0.47
CDH1-202ENST00000422392 PEF1Q9UBV8 284 aaKnown RBP12.13□□□□□ -0.47
CDH1-202ENST00000422392 A1L4Q6 167 aa12.13□□□□□ -0.47
CDH1-202ENST00000422392 DPF1Q92782 380 aa12.13□□□□□ -0.47
CDH1-202ENST00000422392 CST9LQ9H4G1 147 aa12.13□□□□□ -0.47
CDH1-202ENST00000422392 IGKV2D-26A0A0A0MRZ7 120 aa12.12□□□□□ -0.47
CDH1-202ENST00000422392 SPRY2O43597 315 aa12.12□□□□□ -0.47
CDH1-202ENST00000422392 C8orf86Q6ZUL3 223 aa12.12□□□□□ -0.47
CDH1-202ENST00000422392 RAB37Q96AX2 223 aa12.12□□□□□ -0.47
CDH1-202ENST00000422392 PRSS1P07477 247 aa12.12□□□□□ -0.47
CDH1-202ENST00000422392 SRSF2Q01130 221 aaKnown RBP12.12□□□□□ -0.47
CDH1-202ENST00000422392 TMEM158Q8WZ71 300 aa12.12□□□□□ -0.47
CDH1-202ENST00000422392 JMJD8Q96S16 334 aa12.12□□□□□ -0.47
CDH1-202ENST00000422392 SLC50A1Q9BRV3 221 aa12.12□□□□□ -0.47
CDH1-202ENST00000422392 UFC1Q9Y3C8 167 aa12.12□□□□□ -0.47
CDH1-202ENST00000422392 CENPVL3A0A0U1RRI6 287 aa12.11□□□□□ -0.47
CDH1-202ENST00000422392 SEC11AP67812 179 aa12.11□□□□□ -0.47
CDH1-202ENST00000422392 ADAMTSL5Q6ZMM2 481 aa12.11□□□□□ -0.47
CDH1-202ENST00000422392 CSMD2Q7Z408 3487 aa12.11□□□□□ -0.47
CDH1-202ENST00000422392 SPG11Q96JI7 2443 aa12.11□□□□□ -0.47
CDH1-202ENST00000422392 PPBPP02775 128 aa12.11□□□□□ -0.47
CDH1-202ENST00000422392 IGF1P05019 195 aa12.11□□□□□ -0.47
CDH1-202ENST00000422392 FCER1GP30273 86 aa12.11□□□□□ -0.47
CDH1-202ENST00000422392 TMEM78Q5T7P6 136 aa12.11□□□□□ -0.47
CDH1-202ENST00000422392 IGHV7-4-1A0A0J9YVY3 117 aa12.1□□□□□ -0.47
CDH1-202ENST00000422392 GAGE12BA1L429 117 aa12.1□□□□□ -0.47
CDH1-202ENST00000422392 H3BUT2 72 aa12.1□□□□□ -0.47
CDH1-202ENST00000422392 DEFB1P60022 68 aa12.1□□□□□ -0.47
CDH1-202ENST00000422392 LMO4P61968 165 aa12.1□□□□□ -0.47
CDH1-202ENST00000422392 ODF1Q14990 250 aa12.1□□□□□ -0.47
CDH1-202ENST00000422392 METTL26Q96S19 204 aa12.1□□□□□ -0.47
CDH1-202ENST00000422392 RBAKDNA6NC62 111 aa12.1□□□□□ -0.47
CDH1-202ENST00000422392 S100A7P31151 101 aa12.1□□□□□ -0.47
CDH1-202ENST00000422392 KIR3DS1Q14943 382 aa12.1□□□□□ -0.47
CDH1-202ENST00000422392 PRR9Q5T870 116 aa12.1□□□□□ -0.47
CDH1-202ENST00000422392 EEF1AKMT3Q96AZ1 226 aa12.1□□□□□ -0.47
CDH1-202ENST00000422392 FOXC2Q99958 501 aa12.1□□□□□ -0.47
CDH1-202ENST00000422392 CDKN1BP46527 198 aa12.09□□□□□ -0.47
CDH1-202ENST00000422392 RAB9AP51151 201 aa12.09□□□□□ -0.47
CDH1-202ENST00000422392 NPFFO15130 113 aa12.09□□□□□ -0.47
CDH1-202ENST00000422392 LY6DQ14210 128 aa12.09□□□□□ -0.47
CDH1-202ENST00000422392 C5orf56Q8N8D9 126 aa12.09□□□□□ -0.47
CDH1-202ENST00000422392 NXT2Q9NPJ8 142 aaKnown RBP12.09□□□□□ -0.47
CDH1-202ENST00000422392 HHLA3Q9XRX5 114 aa12.09□□□□□ -0.47
CDH1-202ENST00000422392 AGRNO00468 2067 aa12.08□□□□□ -0.48
CDH1-202ENST00000422392 OCIAD2Q56VL3 154 aa12.08□□□□□ -0.48
CDH1-202ENST00000422392 OR9G4Q8NGQ1 327 aa12.08□□□□□ -0.48
CDH1-202ENST00000422392 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.08□□□□□ -0.48
CDH1-202ENST00000422392 IGLV2-18A0A075B6J9 118 aa12.08□□□□□ -0.48
CDH1-202ENST00000422392 GAGE10A6NGK3 116 aa12.08□□□□□ -0.48
CDH1-202ENST00000422392 H3BVH4 76 aa12.08□□□□□ -0.48
CDH1-202ENST00000422392 HSD52Q0P140 79 aa12.08□□□□□ -0.48
CDH1-202ENST00000422392 BRD3OSQ6XYD6 125 aa12.08□□□□□ -0.48
CDH1-202ENST00000422392 GTSCR1Q86UQ5 136 aa12.08□□□□□ -0.48
CDH1-202ENST00000422392 C20orf173Q96LM9 149 aa12.08□□□□□ -0.48
CDH1-202ENST00000422392 A6NDN8 102 aa12.07□□□□□ -0.48
CDH1-202ENST00000422392 TRBV12-3P01733 135 aa12.07□□□□□ -0.48
CDH1-202ENST00000422392 EFNA4P52798 201 aa12.07□□□□□ -0.48
CDH1-202ENST00000422392 OR2K2Q8NGT1 345 aa12.07□□□□□ -0.48
CDH1-202ENST00000422392 C16orf92Q96LL3 132 aa12.07□□□□□ -0.48
CDH1-202ENST00000422392 UTP20O75691 2785 aaKnown RBP12.07□□□□□ -0.48
CDH1-202ENST00000422392 LINC01546A6NGU7 62 aa12.07□□□□□ -0.48
CDH1-202ENST00000422392 Q8N8P6 123 aa12.07□□□□□ -0.48
CDH1-202ENST00000422392 AP1S3Q96PC3 154 aa12.07□□□□□ -0.48
CDH1-202ENST00000422392 TRBV7-1A0A0A6YYK4 115 aa12.06□□□□□ -0.48
CDH1-202ENST00000422392 C9orf118A6NHY6 69 aa12.06□□□□□ -0.48
CDH1-202ENST00000422392 ATP5G2Q06055 141 aa12.06□□□□□ -0.48
CDH1-202ENST00000422392 SPANXN1Q5VSR9 72 aa12.06□□□□□ -0.48
CDH1-202ENST00000422392 UNQ9165/PRO28630Q6UXU0 137 aa12.06□□□□□ -0.48
CDH1-202ENST00000422392 NRACQ8N912 160 aa12.06□□□□□ -0.48
CDH1-202ENST00000422392 H3BRM9 83 aa12.06□□□□□ -0.48
CDH1-202ENST00000422392 K7EMI3 77 aa12.06□□□□□ -0.48
CDH1-202ENST00000422392 IGKCP01834 107 aa12.06□□□□□ -0.48
CDH1-202ENST00000422392 SMIM17P0DL12 118 aa12.06□□□□□ -0.48
CDH1-202ENST00000422392 ZMAT4Q9H898 229 aa12.06□□□□□ -0.48
CDH1-202ENST00000422392 TMEM160Q9NX00 188 aa12.06□□□□□ -0.48
CDH1-202ENST00000422392 TMEM8BA6NDV4 472 aa12.05□□□□□ -0.48
CDH1-202ENST00000422392 ZC2HC1BQ5TFG8 222 aa12.05□□□□□ -0.48
CDH1-202ENST00000422392 C9orf47Q6ZRZ4 202 aa12.05□□□□□ -0.48
CDH1-202ENST00000422392 OR4X2Q8NGF9 303 aa12.05□□□□□ -0.48
CDH1-202ENST00000422392 TRAV40A0A0B4J280 105 aa12.05□□□□□ -0.48
CDH1-202ENST00000422392 A0A0G2JLM5 398 aa12.05□□□□□ -0.48
CDH1-202ENST00000422392 C19orf84I3L1E1 186 aa12.05□□□□□ -0.48
CDH1-202ENST00000422392 UCNP55089 124 aa12.05□□□□□ -0.48
CDH1-202ENST00000422392 KLK9Q2XQG4 91 aa12.05□□□□□ -0.48
CDH1-202ENST00000422392 NPFFR1Q9GZQ6 430 aa12.05□□□□□ -0.48
CDH1-202ENST00000422392 KLK9Q9UKQ9 250 aa12.05□□□□□ -0.48
CDH1-202ENST00000422392 U3KQE9 123 aa12.05□□□□□ -0.48
CDH1-202ENST00000422392 TRAV41A0A0B4J266 112 aa12.04□□□□□ -0.48
CDH1-202ENST00000422392 SIVA1O15304 175 aa12.04□□□□□ -0.48
CDH1-202ENST00000422392 GCSHP23434 173 aa12.04□□□□□ -0.48
CDH1-202ENST00000422392 IGKV3-7A0A075B6H7 116 aa12.04□□□□□ -0.48
CDH1-202ENST00000422392 SAP30O75446 220 aa12.04□□□□□ -0.48
CDH1-202ENST00000422392 FXYD2P54710 66 aa12.04□□□□□ -0.48
CDH1-202ENST00000422392 SMIM15Q7Z3B0 74 aa12.04□□□□□ -0.48
CDH1-202ENST00000422392 VPS25Q9BRG1 176 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms