RNA–Protein interactions for RNA: ENST00000418518.2

LINCMD1-201, Transcript of long intergenic non-protein coding RNA, muscle differentiation 1, humanhuman

TSL 5 BASIC

Gene LINCMD1, Length 462 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINCMD1-201ENST00000418518 ZNF738Q8NE65 137 aa6.84□□□□□ -1.31
LINCMD1-201ENST00000418518 DCANP1Q8TF63 244 aa6.84□□□□□ -1.31
LINCMD1-201ENST00000418518 BORCS7Q96B45 105 aa6.84□□□□□ -1.31
LINCMD1-201ENST00000418518 GSN-AS1Q9NRJ2 163 aa6.84□□□□□ -1.31
LINCMD1-201ENST00000418518 TMEM160Q9NX00 188 aa6.84□□□□□ -1.31
LINCMD1-201ENST00000418518 ACANP16112 2415 aa6.84□□□□□ -1.32
LINCMD1-201ENST00000418518 IGHV4OR15-8A0A075B7B6 117 aa6.83□□□□□ -1.32
LINCMD1-201ENST00000418518 A0A087WW49 117 aa6.83□□□□□ -1.32
LINCMD1-201ENST00000418518 DNAJC9-AS1A6NH13 148 aa6.83□□□□□ -1.32
LINCMD1-201ENST00000418518 Q6ZSV7 163 aa6.83□□□□□ -1.32
LINCMD1-201ENST00000418518 Q6ZWC4 215 aa6.83□□□□□ -1.32
LINCMD1-201ENST00000418518 KLHDC1Q8N7A1 406 aa6.83□□□□□ -1.32
LINCMD1-201ENST00000418518 OR8A1Q8NGG7 326 aa6.83□□□□□ -1.32
LINCMD1-201ENST00000418518 OR10J6PQ8NGY7 276 aa6.83□□□□□ -1.32
LINCMD1-201ENST00000418518 C4orf3Q8WVX3 66 aa6.83□□□□□ -1.32
LINCMD1-201ENST00000418518 ODF3Q96PU9 254 aa6.83□□□□□ -1.32
LINCMD1-201ENST00000418518 C11orf21Q9P2W6 132 aa6.83□□□□□ -1.32
LINCMD1-201ENST00000418518 U3KQK5 164 aa6.83□□□□□ -1.32
LINCMD1-201ENST00000418518 IGKV3D-20A0A0C4DH25 116 aa6.82□□□□□ -1.32
LINCMD1-201ENST00000418518 FAM181BA6NEQ2 426 aa6.82□□□□□ -1.32
LINCMD1-201ENST00000418518 SNAI2O43623 268 aa6.82□□□□□ -1.32
LINCMD1-201ENST00000418518 EDN2P20800 178 aa6.82□□□□□ -1.32
LINCMD1-201ENST00000418518 HOXD3P31249 432 aaPredicted RBP6.82□□□□□ -1.32
LINCMD1-201ENST00000418518 ID1P41134 155 aa6.82□□□□□ -1.32
LINCMD1-201ENST00000418518 IQCJQ1A5X6 159 aa6.82□□□□□ -1.32
LINCMD1-201ENST00000418518 PRR9Q5T870 116 aa6.82□□□□□ -1.32
LINCMD1-201ENST00000418518 FAM104BQ5XKR9 115 aa6.82□□□□□ -1.32
LINCMD1-201ENST00000418518 NIT1Q86X76 327 aa6.82□□□□□ -1.32
LINCMD1-201ENST00000418518 CHCHD1Q96BP2 118 aaKnown RBP6.82□□□□□ -1.32
LINCMD1-201ENST00000418518 URB1-AS1Q96HZ7 61 aa6.82□□□□□ -1.32
LINCMD1-201ENST00000418518 IGHV4-4A0A075B6R2 117 aa6.81□□□□□ -1.32
LINCMD1-201ENST00000418518 TMSB15BA0A087X1C1 80 aa6.81□□□□□ -1.32
LINCMD1-201ENST00000418518 TRAV2A0A0B4J234 112 aa6.81□□□□□ -1.32
LINCMD1-201ENST00000418518 C2orf70A6NJV1 201 aa6.81□□□□□ -1.32
LINCMD1-201ENST00000418518 K7EQG2 157 aa6.81□□□□□ -1.32
LINCMD1-201ENST00000418518 ORM1P02763 201 aa6.81□□□□□ -1.32
LINCMD1-201ENST00000418518 RNASE1P07998 156 aaKnown RBP6.81□□□□□ -1.32
LINCMD1-201ENST00000418518 OR5AL1P0C617 328 aa6.81□□□□□ -1.32
LINCMD1-201ENST00000418518 MED14OSP0DP75 135 aa6.81□□□□□ -1.32
LINCMD1-201ENST00000418518 AMTP48728 403 aa6.81□□□□□ -1.32
LINCMD1-201ENST00000418518 SCGB2A2Q13296 93 aa6.81□□□□□ -1.32
LINCMD1-201ENST00000418518 TCTEX1D4Q5JR98 221 aa6.81□□□□□ -1.32
LINCMD1-201ENST00000418518 SAMD10Q9BYL1 202 aa6.81□□□□□ -1.32
LINCMD1-201ENST00000418518 TMEM191AQ9H0A3 160 aa6.81□□□□□ -1.32
LINCMD1-201ENST00000418518 ESM1Q9NQ30 184 aa6.81□□□□□ -1.32
LINCMD1-201ENST00000418518 FASNP49327 2511 aaKnown RBP6.81□□□□□ -1.32
LINCMD1-201ENST00000418518 GCN1Q92616 2671 aaKnown RBP6.81□□□□□ -1.32
LINCMD1-201ENST00000418518 TRAV21A0A0B4J279 112 aa6.8□□□□□ -1.32
LINCMD1-201ENST00000418518 PCP4L1A6NKN8 68 aa6.8□□□□□ -1.32
LINCMD1-201ENST00000418518 KLLNB2CW77 178 aa6.8□□□□□ -1.32
LINCMD1-201ENST00000418518 LINC01619G3V211 115 aa6.8□□□□□ -1.32
LINCMD1-201ENST00000418518 PMCHP20382 165 aa6.8□□□□□ -1.32
LINCMD1-201ENST00000418518 SYNJ2BPP57105 145 aa6.8□□□□□ -1.32
LINCMD1-201ENST00000418518 ADAMTSL5Q6ZMM2 481 aa6.8□□□□□ -1.32
LINCMD1-201ENST00000418518 TEX43Q6ZNM6 134 aa6.8□□□□□ -1.32
LINCMD1-201ENST00000418518 MS4A6AQ9H2W1 248 aa6.8□□□□□ -1.32
LINCMD1-201ENST00000418518 C16orf95Q9H693 158 aa6.8□□□□□ -1.32
LINCMD1-201ENST00000418518 NAGKQ9UJ70 344 aa6.8□□□□□ -1.32
LINCMD1-201ENST00000418518 RNF114Q9Y508 228 aa6.8□□□□□ -1.32
LINCMD1-201ENST00000418518 A8MTW9 85 aa6.79□□□□□ -1.32
LINCMD1-201ENST00000418518 RAB4AP20338 218 aa6.79□□□□□ -1.32
LINCMD1-201ENST00000418518 PKIAP61925 76 aa6.79□□□□□ -1.32
LINCMD1-201ENST00000418518 CACNG7P62955 275 aa6.79□□□□□ -1.32
LINCMD1-201ENST00000418518 MRPL51Q4U2R6 128 aaKnown RBP6.79□□□□□ -1.32
LINCMD1-201ENST00000418518 Q8N976 141 aa6.79□□□□□ -1.32
LINCMD1-201ENST00000418518 DUX5Q96PT3 197 aa6.79□□□□□ -1.32
LINCMD1-201ENST00000418518 TPPP3Q9BW30 176 aa6.79□□□□□ -1.32
LINCMD1-201ENST00000418518 AGRNO00468 2067 aa6.79□□□□□ -1.32
LINCMD1-201ENST00000418518 MTORP42345 2549 aa6.79□□□□□ -1.32
LINCMD1-201ENST00000418518 A0A0J9YX75 114 aa6.78□□□□□ -1.32
LINCMD1-201ENST00000418518 M0QZ24 198 aa6.78□□□□□ -1.32
LINCMD1-201ENST00000418518 HSBP1O75506 76 aa6.78□□□□□ -1.32
LINCMD1-201ENST00000418518 PPBPP02775 128 aa6.78□□□□□ -1.32
LINCMD1-201ENST00000418518 ZNF705DP0CH99 300 aaPredicted RBP6.78□□□□□ -1.32
LINCMD1-201ENST00000418518 ZNF705BP0CI00 300 aaPredicted RBP6.78□□□□□ -1.32
LINCMD1-201ENST00000418518 NTF3P20783 257 aa6.78□□□□□ -1.32
LINCMD1-201ENST00000418518 RPL11P62913 178 aaKnown RBP6.78□□□□□ -1.32
LINCMD1-201ENST00000418518 FHL3Q13643 280 aa6.78□□□□□ -1.32
LINCMD1-201ENST00000418518 RNASEKQ6P5S7 137 aaKnown RBP6.78□□□□□ -1.32
LINCMD1-201ENST00000418518 C18orf65Q6ZTR6 163 aa6.78□□□□□ -1.32
LINCMD1-201ENST00000418518 RNF185Q96GF1 192 aa6.78□□□□□ -1.32
LINCMD1-201ENST00000418518 YAE1D1Q9NRH1 226 aa6.78□□□□□ -1.32
LINCMD1-201ENST00000418518 LAMTOR2Q9Y2Q5 125 aa6.78□□□□□ -1.32
LINCMD1-201ENST00000418518 SORL1Q92673 2214 aa6.78□□□□□ -1.32
LINCMD1-201ENST00000418518 MUC4Q99102 2169 aa6.78□□□□□ -1.32
LINCMD1-201ENST00000418518 KIR2DL5BA0A0G2JN68 375 aa6.77□□□□□ -1.33
LINCMD1-201ENST00000418518 KIR2DL5BA0A0G2JPC4 375 aa6.77□□□□□ -1.33
LINCMD1-201ENST00000418518 LINC00587B1AMM8 73 aa6.77□□□□□ -1.33
LINCMD1-201ENST00000418518 F6UB75 175 aa6.77□□□□□ -1.33
LINCMD1-201ENST00000418518 NXPH4O95158 308 aa6.77□□□□□ -1.33
LINCMD1-201ENST00000418518 SLURP1P55000 103 aa6.77□□□□□ -1.33
LINCMD1-201ENST00000418518 HILS1P60008 231 aa6.77□□□□□ -1.33
LINCMD1-201ENST00000418518 DEFB1P60022 68 aa6.77□□□□□ -1.33
LINCMD1-201ENST00000418518 SNRPD3P62318 126 aaKnown RBP6.77□□□□□ -1.33
LINCMD1-201ENST00000418518 TWIST1Q15672 202 aa6.77□□□□□ -1.33
LINCMD1-201ENST00000418518 AMN1Q8IY45 258 aa6.77□□□□□ -1.33
LINCMD1-201ENST00000418518 KIR2DL5AQ8N109 375 aa6.77□□□□□ -1.33
LINCMD1-201ENST00000418518 ORMDL3Q8N138 153 aa6.77□□□□□ -1.33
LINCMD1-201ENST00000418518 FAM19A2Q8N3H0 131 aa6.77□□□□□ -1.33
LINCMD1-201ENST00000418518 OR9G4Q8NGQ1 327 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms