RNA–Protein interactions for RNA: ENST00000417664.6

SSBP3-205, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 1,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-205ENST00000417664 HIST1H2BLQ99880 126 aa12.66□□□□□ -0.38
SSBP3-205ENST00000417664 IGKV3-7A0A075B6H7 116 aa12.65□□□□□ -0.38
SSBP3-205ENST00000417664 K7EQG2 157 aa12.65□□□□□ -0.38
SSBP3-205ENST00000417664 ESDP10768 282 aa12.65□□□□□ -0.38
SSBP3-205ENST00000417664 FOSL1P15407 271 aa12.65□□□□□ -0.38
SSBP3-205ENST00000417664 PDZD11Q5EBL8 140 aa12.65□□□□□ -0.38
SSBP3-205ENST00000417664 C18orf65Q6ZTR6 163 aa12.65□□□□□ -0.38
SSBP3-205ENST00000417664 LINC01006Q8NI28 216 aa12.65□□□□□ -0.38
SSBP3-205ENST00000417664 TMEM18Q96B42 140 aa12.65□□□□□ -0.38
SSBP3-205ENST00000417664 IGLC6P0CF74 106 aa12.64□□□□□ -0.39
SSBP3-205ENST00000417664 FABP4P15090 132 aa12.64□□□□□ -0.39
SSBP3-205ENST00000417664 CTRLP40313 264 aa12.64□□□□□ -0.39
SSBP3-205ENST00000417664 SLURP1P55000 103 aa12.64□□□□□ -0.39
SSBP3-205ENST00000417664 FER1L6-AS1Q8NA97 138 aa12.64□□□□□ -0.39
SSBP3-205ENST00000417664 OR9G4Q8NGQ1 327 aa12.64□□□□□ -0.39
SSBP3-205ENST00000417664 FAM19A4Q96LR4 140 aa12.64□□□□□ -0.39
SSBP3-205ENST00000417664 HIVEP2P31629 2446 aa12.64□□□□□ -0.39
SSBP3-205ENST00000417664 TRAV2A0A0B4J234 112 aa12.64□□□□□ -0.39
SSBP3-205ENST00000417664 GRIFINA4D1Z8 144 aa12.64□□□□□ -0.39
SSBP3-205ENST00000417664 F2Z2F3 143 aa12.64□□□□□ -0.39
SSBP3-205ENST00000417664 ARMS2P0C7Q2 107 aa12.64□□□□□ -0.39
SSBP3-205ENST00000417664 SRIP30626 198 aa12.64□□□□□ -0.39
SSBP3-205ENST00000417664 DEFB136Q30KP8 78 aa12.64□□□□□ -0.39
SSBP3-205ENST00000417664 KIAA1644Q3SXP7 199 aa12.64□□□□□ -0.39
SSBP3-205ENST00000417664 LYZL1Q6UWQ5 148 aa12.64□□□□□ -0.39
SSBP3-205ENST00000417664 BAGE3Q86Y29 109 aa12.64□□□□□ -0.39
SSBP3-205ENST00000417664 APRG1Q8IVJ8 170 aa12.64□□□□□ -0.39
SSBP3-205ENST00000417664 C12orf57Q99622 126 aa12.64□□□□□ -0.39
SSBP3-205ENST00000417664 ZNF493Q6ZR52 646 aa12.63□□□□□ -0.39
SSBP3-205ENST00000417664 ZFAND2AQ8N6M9 145 aa12.63□□□□□ -0.39
SSBP3-205ENST00000417664 PACRGQ96M98 296 aaPredicted RBP12.63□□□□□ -0.39
SSBP3-205ENST00000417664 SMR3AQ99954 134 aa12.63□□□□□ -0.39
SSBP3-205ENST00000417664 CNFNQ9BYD5 112 aa12.63□□□□□ -0.39
SSBP3-205ENST00000417664 TSSC4Q9Y5U2 329 aaPredicted RBP12.63□□□□□ -0.39
SSBP3-205ENST00000417664 TMSB15BA0A087X1C1 80 aa12.62□□□□□ -0.39
SSBP3-205ENST00000417664 TRAV21A0A0B4J279 112 aa12.62□□□□□ -0.39
SSBP3-205ENST00000417664 AMBPP02760 352 aa12.62□□□□□ -0.39
SSBP3-205ENST00000417664 WFDC3Q8IUB2 231 aa12.62□□□□□ -0.39
SSBP3-205ENST00000417664 OR10D4PQ8NGN7 298 aa12.62□□□□□ -0.39
SSBP3-205ENST00000417664 ODF3Q96PU9 254 aa12.62□□□□□ -0.39
SSBP3-205ENST00000417664 SSBP4Q9BWG4 385 aaPredicted RBP12.62□□□□□ -0.39
SSBP3-205ENST00000417664 ZNF705DP0CH99 300 aaPredicted RBP12.61□□□□□ -0.39
SSBP3-205ENST00000417664 ZNF705BP0CI00 300 aaPredicted RBP12.61□□□□□ -0.39
SSBP3-205ENST00000417664 FHL3Q13643 280 aa12.61□□□□□ -0.39
SSBP3-205ENST00000417664 ZNF575Q86XF7 245 aa12.61□□□□□ -0.39
SSBP3-205ENST00000417664 TMEM256Q8N2U0 113 aa12.61□□□□□ -0.39
SSBP3-205ENST00000417664 ALKBH7Q9BT30 221 aaPredicted RBP12.61□□□□□ -0.39
SSBP3-205ENST00000417664 TPPP3Q9BW30 176 aa12.61□□□□□ -0.39
SSBP3-205ENST00000417664 TP53TG3Q9ULZ0 132 aa12.61□□□□□ -0.39
SSBP3-205ENST00000417664 ADAMTSL5Q6ZMM2 481 aa12.61□□□□□ -0.39
SSBP3-205ENST00000417664 LOC102724200A0A096LPH7 203 aaPredicted RBP12.6□□□□□ -0.39
SSBP3-205ENST00000417664 IGKV3D-20A0A0C4DH25 116 aa12.6□□□□□ -0.39
SSBP3-205ENST00000417664 GPX1P07203 203 aa12.6□□□□□ -0.39
SSBP3-205ENST00000417664 DMRTA1Q5VZB9 504 aa12.6□□□□□ -0.39
SSBP3-205ENST00000417664 DLX4Q92988 240 aaPredicted RBP12.6□□□□□ -0.39
SSBP3-205ENST00000417664 SERF1AO75920 110 aa12.59□□□□□ -0.39
SSBP3-205ENST00000417664 ZNF688P0C7X2 276 aa12.59□□□□□ -0.39
SSBP3-205ENST00000417664 CD28P10747 220 aa12.59□□□□□ -0.39
SSBP3-205ENST00000417664 PSMG4Q5JS54 123 aa12.59□□□□□ -0.39
SSBP3-205ENST00000417664 C18orf32Q8TCD1 76 aa12.59□□□□□ -0.39
SSBP3-205ENST00000417664 NOTCH2Q04721 2471 aa12.59□□□□□ -0.39
SSBP3-205ENST00000417664 F6UB75 175 aa12.58□□□□□ -0.4
SSBP3-205ENST00000417664 CCL24O00175 119 aa12.58□□□□□ -0.4
SSBP3-205ENST00000417664 DUSP14O95147 198 aaKnown RBP12.58□□□□□ -0.4
SSBP3-205ENST00000417664 CSN3P07498 182 aa12.58□□□□□ -0.4
SSBP3-205ENST00000417664 TFPI2P48307 235 aa12.58□□□□□ -0.4
SSBP3-205ENST00000417664 EBLN2Q6P2I7 272 aa12.58□□□□□ -0.4
SSBP3-205ENST00000417664 RAX2Q96IS3 184 aa12.58□□□□□ -0.4
SSBP3-205ENST00000417664 C11orf21Q9P2W6 132 aa12.58□□□□□ -0.4
SSBP3-205ENST00000417664 ANK3Q12955 4377 aaKnown RBP12.58□□□□□ -0.4
SSBP3-205ENST00000417664 A0A0J9YX75 114 aa12.57□□□□□ -0.4
SSBP3-205ENST00000417664 A0A1B0GUS0 222 aa12.57□□□□□ -0.4
SSBP3-205ENST00000417664 KLLNB2CW77 178 aa12.57□□□□□ -0.4
SSBP3-205ENST00000417664 LINC00310P59036 64 aa12.57□□□□□ -0.4
SSBP3-205ENST00000417664 DNLZQ5SXM8 178 aa12.57□□□□□ -0.4
SSBP3-205ENST00000417664 SIGLEC8Q9NYZ4 499 aa12.57□□□□□ -0.4
SSBP3-205ENST00000417664 RNF114Q9Y508 228 aa12.57□□□□□ -0.4
SSBP3-205ENST00000417664 MTORP42345 2549 aa12.57□□□□□ -0.4
SSBP3-205ENST00000417664 OR5AL1P0C617 328 aa12.57□□□□□ -0.4
SSBP3-205ENST00000417664 LEPP41159 167 aa12.57□□□□□ -0.4
SSBP3-205ENST00000417664 PRR9Q5T870 116 aa12.57□□□□□ -0.4
SSBP3-205ENST00000417664 FOXI2Q6ZQN5 318 aa12.57□□□□□ -0.4
SSBP3-205ENST00000417664 DYNLRB2Q8TF09 96 aa12.57□□□□□ -0.4
SSBP3-205ENST00000417664 CITED2Q99967 270 aaPredicted RBP12.57□□□□□ -0.4
SSBP3-205ENST00000417664 SELENOKQ9Y6D0 94 aa12.57□□□□□ -0.4
SSBP3-205ENST00000417664 TRAV25A0A0B4J276 109 aa12.56□□□□□ -0.4
SSBP3-205ENST00000417664 NUPR1O60356 82 aa12.56□□□□□ -0.4
SSBP3-205ENST00000417664 NTF3P20783 257 aa12.56□□□□□ -0.4
SSBP3-205ENST00000417664 PROK1P58294 105 aa12.56□□□□□ -0.4
SSBP3-205ENST00000417664 DEFB1P60022 68 aa12.56□□□□□ -0.4
SSBP3-205ENST00000417664 TWIST1Q15672 202 aa12.56□□□□□ -0.4
SSBP3-205ENST00000417664 PYY3Q5JQD4 70 aa12.56□□□□□ -0.4
SSBP3-205ENST00000417664 KCNS1Q96KK3 526 aa12.56□□□□□ -0.4
SSBP3-205ENST00000417664 DUX3Q96PT4 197 aa12.56□□□□□ -0.4
SSBP3-205ENST00000417664 SNAI2O43623 268 aa12.55□□□□□ -0.4
SSBP3-205ENST00000417664 TCF21O43680 179 aa12.55□□□□□ -0.4
SSBP3-205ENST00000417664 MED14OSP0DP75 135 aa12.55□□□□□ -0.4
SSBP3-205ENST00000417664 TSPOP30536 169 aa12.55□□□□□ -0.4
SSBP3-205ENST00000417664 FAM104BQ5XKR9 115 aa12.55□□□□□ -0.4
SSBP3-205ENST00000417664 TMEM191AQ9H0A3 160 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms