RNA–Protein interactions for RNA: ENST00000417496.6

HDAC9-208, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-208ENST00000417496 TM4SF20Q53R12 229 aa11.12□□□□□ -0.63
HDAC9-208ENST00000417496 ARL6IP6Q8N6S5 226 aa11.12□□□□□ -0.63
HDAC9-208ENST00000417496 CNFNQ9BYD5 112 aa11.12□□□□□ -0.63
HDAC9-208ENST00000417496 CSMD2Q7Z408 3487 aa11.12□□□□□ -0.63
HDAC9-208ENST00000417496 CENPVL3A0A0U1RRI6 287 aa11.11□□□□□ -0.63
HDAC9-208ENST00000417496 DEFB1P60022 68 aa11.11□□□□□ -0.63
HDAC9-208ENST00000417496 LMO4P61968 165 aa11.11□□□□□ -0.63
HDAC9-208ENST00000417496 LINC01559Q495D7 138 aa11.11□□□□□ -0.63
HDAC9-208ENST00000417496 C8orf86Q6ZUL3 223 aa11.11□□□□□ -0.63
HDAC9-208ENST00000417496 IGKV2D-26A0A0A0MRZ7 120 aa11.11□□□□□ -0.63
HDAC9-208ENST00000417496 FBLL1A6NHQ2 334 aaKnown RBP11.11□□□□□ -0.63
HDAC9-208ENST00000417496 SMAD7O15105 426 aaKnown RBP11.11□□□□□ -0.63
HDAC9-208ENST00000417496 PRSS1P07477 247 aa11.1□□□□□ -0.63
HDAC9-208ENST00000417496 RAB37Q96AX2 223 aa11.1□□□□□ -0.63
HDAC9-208ENST00000417496 UFC1Q9Y3C8 167 aa11.1□□□□□ -0.63
HDAC9-208ENST00000417496 TMEM158Q8WZ71 300 aa11.1□□□□□ -0.63
HDAC9-208ENST00000417496 A1L4Q6 167 aa11.09□□□□□ -0.63
HDAC9-208ENST00000417496 TMEM78Q5T7P6 136 aa11.09□□□□□ -0.63
HDAC9-208ENST00000417496 BRD3OSQ6XYD6 125 aa11.09□□□□□ -0.63
HDAC9-208ENST00000417496 METTL26Q96S19 204 aa11.09□□□□□ -0.63
HDAC9-208ENST00000417496 NPFFO15130 113 aa11.09□□□□□ -0.63
HDAC9-208ENST00000417496 TRBV12-3P01733 135 aa11.09□□□□□ -0.63
HDAC9-208ENST00000417496 ADAMTSL5Q6ZMM2 481 aa11.09□□□□□ -0.63
HDAC9-208ENST00000417496 C5orf56Q8N8D9 126 aa11.09□□□□□ -0.63
HDAC9-208ENST00000417496 OR1N2Q8NGR9 330 aa11.09□□□□□ -0.63
HDAC9-208ENST00000417496 EEF1AKMT3Q96AZ1 226 aa11.09□□□□□ -0.63
HDAC9-208ENST00000417496 PEF1Q9UBV8 284 aaKnown RBP11.09□□□□□ -0.63
HDAC9-208ENST00000417496 CRYBG3Q68DQ2 2970 aa11.08□□□□□ -0.64
HDAC9-208ENST00000417496 IGHV7-4-1A0A0J9YVY3 117 aa11.08□□□□□ -0.64
HDAC9-208ENST00000417496 PPBPP02775 128 aa11.08□□□□□ -0.64
HDAC9-208ENST00000417496 FCER1GP30273 86 aa11.08□□□□□ -0.64
HDAC9-208ENST00000417496 EFNA4P52798 201 aa11.08□□□□□ -0.64
HDAC9-208ENST00000417496 PRR9Q5T870 116 aa11.08□□□□□ -0.64
HDAC9-208ENST00000417496 SLC50A1Q9BRV3 221 aa11.08□□□□□ -0.64
HDAC9-208ENST00000417496 CST9LQ9H4G1 147 aa11.08□□□□□ -0.64
HDAC9-208ENST00000417496 HHLA3Q9XRX5 114 aa11.08□□□□□ -0.64
HDAC9-208ENST00000417496 GAGE12BA1L429 117 aa11.08□□□□□ -0.64
HDAC9-208ENST00000417496 ODF1Q14990 250 aa11.08□□□□□ -0.64
HDAC9-208ENST00000417496 DPF1Q92782 380 aa11.08□□□□□ -0.64
HDAC9-208ENST00000417496 RBAKDNA6NC62 111 aa11.07□□□□□ -0.64
HDAC9-208ENST00000417496 H3BUT2 72 aa11.07□□□□□ -0.64
HDAC9-208ENST00000417496 C19orf84I3L1E1 186 aa11.07□□□□□ -0.64
HDAC9-208ENST00000417496 SEC11AP67812 179 aa11.07□□□□□ -0.64
HDAC9-208ENST00000417496 SRSF2Q01130 221 aaKnown RBP11.07□□□□□ -0.64
HDAC9-208ENST00000417496 UNQ9165/PRO28630Q6UXU0 137 aa11.07□□□□□ -0.64
HDAC9-208ENST00000417496 C16orf92Q96LL3 132 aa11.07□□□□□ -0.64
HDAC9-208ENST00000417496 C20orf173Q96LM9 149 aa11.07□□□□□ -0.64
HDAC9-208ENST00000417496 JMJD8Q96S16 334 aa11.07□□□□□ -0.64
HDAC9-208ENST00000417496 FOXC2Q99958 501 aa11.07□□□□□ -0.64
HDAC9-208ENST00000417496 ABCA2Q9BZC7 2435 aa11.07□□□□□ -0.64
HDAC9-208ENST00000417496 IGKV3-7A0A075B6H7 116 aa11.07□□□□□ -0.64
HDAC9-208ENST00000417496 S100A7P31151 101 aa11.07□□□□□ -0.64
HDAC9-208ENST00000417496 RAB9AP51151 201 aa11.07□□□□□ -0.64
HDAC9-208ENST00000417496 ATP5G2Q06055 141 aa11.07□□□□□ -0.64
HDAC9-208ENST00000417496 KIR3DS1Q14943 382 aa11.07□□□□□ -0.64
HDAC9-208ENST00000417496 GTSCR1Q86UQ5 136 aa11.07□□□□□ -0.64
HDAC9-208ENST00000417496 OR2K2Q8NGT1 345 aa11.07□□□□□ -0.64
HDAC9-208ENST00000417496 NXT2Q9NPJ8 142 aaKnown RBP11.07□□□□□ -0.64
HDAC9-208ENST00000417496 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.07□□□□□ -0.64
HDAC9-208ENST00000417496 H3BVH4 76 aa11.06□□□□□ -0.64
HDAC9-208ENST00000417496 SPANXN1Q5VSR9 72 aa11.06□□□□□ -0.64
HDAC9-208ENST00000417496 IGLV2-18A0A075B6J9 118 aa11.06□□□□□ -0.64
HDAC9-208ENST00000417496 TRBV7-1A0A0A6YYK4 115 aa11.06□□□□□ -0.64
HDAC9-208ENST00000417496 K7EMI3 77 aa11.06□□□□□ -0.64
HDAC9-208ENST00000417496 GAGE10A6NGK3 116 aa11.05□□□□□ -0.64
HDAC9-208ENST00000417496 SMIM17P0DL12 118 aa11.05□□□□□ -0.64
HDAC9-208ENST00000417496 UCNP55089 124 aa11.05□□□□□ -0.64
HDAC9-208ENST00000417496 TRAV41A0A0B4J266 112 aa11.05□□□□□ -0.64
HDAC9-208ENST00000417496 OCIAD2Q56VL3 154 aa11.05□□□□□ -0.64
HDAC9-208ENST00000417496 LCNL1Q6ZST4 164 aa11.05□□□□□ -0.64
HDAC9-208ENST00000417496 TMEM160Q9NX00 188 aa11.05□□□□□ -0.64
HDAC9-208ENST00000417496 TMEM8BA6NDV4 472 aa11.04□□□□□ -0.64
HDAC9-208ENST00000417496 LINC01546A6NGU7 62 aa11.04□□□□□ -0.64
HDAC9-208ENST00000417496 IGHV3-11P01762 117 aa11.04□□□□□ -0.64
HDAC9-208ENST00000417496 CDKN1BP46527 198 aa11.04□□□□□ -0.64
HDAC9-208ENST00000417496 HSD52Q0P140 79 aa11.04□□□□□ -0.64
HDAC9-208ENST00000417496 LY6EQ16553 131 aa11.04□□□□□ -0.64
HDAC9-208ENST00000417496 NRACQ8N912 160 aa11.04□□□□□ -0.64
HDAC9-208ENST00000417496 OR9G4Q8NGQ1 327 aa11.04□□□□□ -0.64
HDAC9-208ENST00000417496 TRAV40A0A0B4J280 105 aa11.04□□□□□ -0.64
HDAC9-208ENST00000417496 Q8N8P6 123 aa11.04□□□□□ -0.64
HDAC9-208ENST00000417496 PIFOQ8TCI5 191 aa11.04□□□□□ -0.64
HDAC9-208ENST00000417496 U3KQE9 123 aa11.04□□□□□ -0.64
HDAC9-208ENST00000417496 A6NDN8 102 aa11.03□□□□□ -0.64
HDAC9-208ENST00000417496 C9orf118A6NHY6 69 aa11.03□□□□□ -0.64
HDAC9-208ENST00000417496 RPL11P62913 178 aaKnown RBP11.03□□□□□ -0.64
HDAC9-208ENST00000417496 ZC2HC1BQ5TFG8 222 aa11.03□□□□□ -0.64
HDAC9-208ENST00000417496 C9orf47Q6ZRZ4 202 aa11.03□□□□□ -0.64
HDAC9-208ENST00000417496 GLMPQ8WWB7 406 aa11.03□□□□□ -0.64
HDAC9-208ENST00000417496 AP1S3Q96PC3 154 aa11.03□□□□□ -0.64
HDAC9-208ENST00000417496 A0A0G2JLM5 398 aa11.03□□□□□ -0.64
HDAC9-208ENST00000417496 F6UB75 175 aa11.03□□□□□ -0.64
HDAC9-208ENST00000417496 M0R381 172 aa11.03□□□□□ -0.64
HDAC9-208ENST00000417496 IGKCP01834 107 aa11.03□□□□□ -0.64
HDAC9-208ENST00000417496 GCSHP23434 173 aa11.03□□□□□ -0.64
HDAC9-208ENST00000417496 ARL3P36405 182 aa11.03□□□□□ -0.64
HDAC9-208ENST00000417496 KLK9Q2XQG4 91 aa11.03□□□□□ -0.64
HDAC9-208ENST00000417496 GPHB5Q86YW7 130 aa11.03□□□□□ -0.64
HDAC9-208ENST00000417496 KLK15Q9H2R5 256 aa11.03□□□□□ -0.64
HDAC9-208ENST00000417496 ZMAT4Q9H898 229 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms