RNA–Protein interactions for RNA: ENST00000416204.1

LINC01238-201, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

TSL 2 BASIC

Gene LINC01238, Length 590 nt, Biotype lincRNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-201ENST00000416204 TREM1Q9NP99 234 aa6.35□□□□□ -1.39
LINC01238-201ENST00000416204 UQCC1Q9NVA1 299 aa6.35□□□□□ -1.39
LINC01238-201ENST00000416204 IGLV5-52A0A0A0MRZ9 124 aa6.34□□□□□ -1.39
LINC01238-201ENST00000416204 KRTAP29-1A8MX34 341 aaPredicted RBP6.34□□□□□ -1.39
LINC01238-201ENST00000416204 SNURFLB1AK76 121 aa6.34□□□□□ -1.39
LINC01238-201ENST00000416204 H3BTX0 84 aa6.34□□□□□ -1.39
LINC01238-201ENST00000416204 H7BYZ3 331 aa6.34□□□□□ -1.39
LINC01238-201ENST00000416204 CST7O76096 145 aa6.34□□□□□ -1.39
LINC01238-201ENST00000416204 IGHV3-53P01767 116 aa6.34□□□□□ -1.39
LINC01238-201ENST00000416204 APOC3P02656 99 aa6.34□□□□□ -1.39
LINC01238-201ENST00000416204 CDKN1BP46527 198 aa6.34□□□□□ -1.39
LINC01238-201ENST00000416204 SERF2P84101 59 aa6.34□□□□□ -1.39
LINC01238-201ENST00000416204 AKR1C8PQ5T2L2 129 aa6.34□□□□□ -1.39
LINC01238-201ENST00000416204 GFI1BQ5VTD9 330 aa6.34□□□□□ -1.39
LINC01238-201ENST00000416204 TMEM14EPQ6UXP3 125 aa6.34□□□□□ -1.39
LINC01238-201ENST00000416204 HSD17B11Q8NBQ5 300 aa6.34□□□□□ -1.39
LINC01238-201ENST00000416204 RPUSD4Q96CM3 377 aaKnown RBP6.34□□□□□ -1.39
LINC01238-201ENST00000416204 TIMM9Q9Y5J7 89 aa6.34□□□□□ -1.39
LINC01238-201ENST00000416204 TRGV2A0A075B6R0 118 aa6.33□□□□□ -1.4
LINC01238-201ENST00000416204 TRAV1-1A0A0B4J248 108 aa6.33□□□□□ -1.4
LINC01238-201ENST00000416204 TRAV12-3A0A0B4J271 114 aa6.33□□□□□ -1.4
LINC01238-201ENST00000416204 PRAC2D3DTV9 90 aa6.33□□□□□ -1.4
LINC01238-201ENST00000416204 F8W036 122 aa6.33□□□□□ -1.4
LINC01238-201ENST00000416204 SNAPINO95295 136 aa6.33□□□□□ -1.4
LINC01238-201ENST00000416204 PSG3Q16557 428 aa6.33□□□□□ -1.4
LINC01238-201ENST00000416204 THAP8Q8NA92 274 aa6.33□□□□□ -1.4
LINC01238-201ENST00000416204 SYT8Q8NBV8 401 aa6.33□□□□□ -1.4
LINC01238-201ENST00000416204 NKX6-2Q9C056 277 aaPredicted RBP6.33□□□□□ -1.4
LINC01238-201ENST00000416204 SH3BGRL3Q9H299 93 aa6.33□□□□□ -1.4
LINC01238-201ENST00000416204 PLA2G2DQ9UNK4 145 aa6.33□□□□□ -1.4
LINC01238-201ENST00000416204 TRGV1A0A0A0MS02 117 aa6.32□□□□□ -1.4
LINC01238-201ENST00000416204 H3BNG1 76 aa6.32□□□□□ -1.4
LINC01238-201ENST00000416204 MBP02144 154 aa6.32□□□□□ -1.4
LINC01238-201ENST00000416204 GUK1Q16774 197 aa6.32□□□□□ -1.4
LINC01238-201ENST00000416204 SPANXN5Q5MJ07 72 aa6.32□□□□□ -1.4
LINC01238-201ENST00000416204 SERTAD4-AS1Q5TG53 156 aa6.32□□□□□ -1.4
LINC01238-201ENST00000416204 NFE4Q86UQ8 179 aa6.32□□□□□ -1.4
LINC01238-201ENST00000416204 WFDC10BQ8IUB3 73 aa6.32□□□□□ -1.4
LINC01238-201ENST00000416204 LINC00528Q8N1L1 170 aa6.32□□□□□ -1.4
LINC01238-201ENST00000416204 OR10P1Q8NGE3 313 aa6.32□□□□□ -1.4
LINC01238-201ENST00000416204 FAM213BQ8TBF2 198 aa6.32□□□□□ -1.4
LINC01238-201ENST00000416204 GGACTQ9BVM4 153 aa6.32□□□□□ -1.4
LINC01238-201ENST00000416204 GSN-AS1Q9NRJ2 163 aa6.32□□□□□ -1.4
LINC01238-201ENST00000416204 MSRB1Q9NZV6 116 aa6.32□□□□□ -1.4
LINC01238-201ENST00000416204 PKHD1L1Q86WI1 4243 aa6.32□□□□□ -1.4
LINC01238-201ENST00000416204 SMCO3A2RU48 225 aa6.31□□□□□ -1.4
LINC01238-201ENST00000416204 NPIPB6E9PJ23 425 aa6.31□□□□□ -1.4
LINC01238-201ENST00000416204 H3BRN7 92 aa6.31□□□□□ -1.4
LINC01238-201ENST00000416204 PAX4O43316 350 aa6.31□□□□□ -1.4
LINC01238-201ENST00000416204 NDUFS6O75380 124 aaKnown RBP6.31□□□□□ -1.4
LINC01238-201ENST00000416204 SCO1O75880 301 aa6.31□□□□□ -1.4
LINC01238-201ENST00000416204 H2AFB1P0C5Y9 115 aa6.31□□□□□ -1.4
LINC01238-201ENST00000416204 OR5G3P0C626 314 aa6.31□□□□□ -1.4
LINC01238-201ENST00000416204 METTL15P1P0C7V9 234 aa6.31□□□□□ -1.4
LINC01238-201ENST00000416204 ATP5IP56385 69 aaPredicted RBP6.31□□□□□ -1.4
LINC01238-201ENST00000416204 AKR1C1Q04828 323 aa6.31□□□□□ -1.4
LINC01238-201ENST00000416204 SLC38A11Q08AI6 406 aa6.31□□□□□ -1.4
LINC01238-201ENST00000416204 VWC2Q2TAL6 325 aa6.31□□□□□ -1.4
LINC01238-201ENST00000416204 DMRTA1Q5VZB9 504 aa6.31□□□□□ -1.4
LINC01238-201ENST00000416204 LYPD5Q6UWN5 251 aa6.31□□□□□ -1.4
LINC01238-201ENST00000416204 GPR82Q96P67 336 aa6.31□□□□□ -1.4
LINC01238-201ENST00000416204 SHANK2-AS3Q9BTD1 123 aa6.31□□□□□ -1.4
LINC01238-201ENST00000416204 WDR61Q9GZS3 305 aaKnown RBP6.31□□□□□ -1.4
LINC01238-201ENST00000416204 FUT9Q9Y231 359 aa6.31□□□□□ -1.4
LINC01238-201ENST00000416204 ICOSQ9Y6W8 199 aa6.31□□□□□ -1.4
LINC01238-201ENST00000416204 RBFOX3A6NFN3 312 aa6.3□□□□□ -1.4
LINC01238-201ENST00000416204 PMS2P5A8MQ11 134 aa6.3□□□□□ -1.4
LINC01238-201ENST00000416204 H3BP45 60 aa6.3□□□□□ -1.4
LINC01238-201ENST00000416204 PLA2G1BP04054 148 aaKnown RBP6.3□□□□□ -1.4
LINC01238-201ENST00000416204 SFTA3P0C7M3 94 aa6.3□□□□□ -1.4
LINC01238-201ENST00000416204 ADCYAP1P18509 176 aa6.3□□□□□ -1.4
LINC01238-201ENST00000416204 TAGLN2P37802 199 aaKnown RBP6.3□□□□□ -1.4
LINC01238-201ENST00000416204 RAB11AP62491 216 aa6.3□□□□□ -1.4
LINC01238-201ENST00000416204 SRSF3P84103 164 aaKnown RBP6.3□□□□□ -1.4
LINC01238-201ENST00000416204 ARL16Q0P5N6 197 aa6.3□□□□□ -1.4
LINC01238-201ENST00000416204 BTN1A1Q13410 526 aa6.3□□□□□ -1.4
LINC01238-201ENST00000416204 MBD3L1Q8WWY6 194 aa6.3□□□□□ -1.4
LINC01238-201ENST00000416204 C8orf49Q96NF6 230 aa6.3□□□□□ -1.4
LINC01238-201ENST00000416204 TMEM70Q9BUB7 260 aa6.3□□□□□ -1.4
LINC01238-201ENST00000416204 EIF5A2Q9GZV4 153 aaKnown RBP6.3□□□□□ -1.4
LINC01238-201ENST00000416204 SLC45A2Q9UMX9 530 aa6.3□□□□□ -1.4
LINC01238-201ENST00000416204 HIGD1AQ9Y241 93 aa6.3□□□□□ -1.4
LINC01238-201ENST00000416204 LY96Q9Y6Y9 160 aa6.3□□□□□ -1.4
LINC01238-201ENST00000416204 FNDC10F2Z333 226 aa6.29□□□□□ -1.4
LINC01238-201ENST00000416204 C17orf112F2Z3M2 114 aa6.29□□□□□ -1.4
LINC01238-201ENST00000416204 SLC17A3O00476 420 aa6.29□□□□□ -1.4
LINC01238-201ENST00000416204 AGPAT2O15120 278 aa6.29□□□□□ -1.4
LINC01238-201ENST00000416204 PSCAO43653 123 aa6.29□□□□□ -1.4
LINC01238-201ENST00000416204 MPDU1O75352 247 aa6.29□□□□□ -1.4
LINC01238-201ENST00000416204 RPL7P18124 248 aaKnown RBP6.29□□□□□ -1.4
LINC01238-201ENST00000416204 KHDC3LQ587J8 217 aa6.29□□□□□ -1.4
LINC01238-201ENST00000416204 ZNF506Q5JVG8 444 aa6.29□□□□□ -1.4
LINC01238-201ENST00000416204 OR10G4Q8NGN3 311 aa6.29□□□□□ -1.4
LINC01238-201ENST00000416204 LINC00467Q9BRT7 94 aa6.29□□□□□ -1.4
LINC01238-201ENST00000416204 MRPL16Q9NX20 251 aaKnown RBP6.29□□□□□ -1.4
LINC01238-201ENST00000416204 KLF12Q9Y4X4 402 aa6.29□□□□□ -1.4
LINC01238-201ENST00000416204 LRP2P98164 4655 aa6.28□□□□□ -1.4
LINC01238-201ENST00000416204 TRAV9-2A0A087WT02 112 aa6.28□□□□□ -1.4
LINC01238-201ENST00000416204 UBE2L5PA0A1B0GUS4 154 aa6.28□□□□□ -1.4
LINC01238-201ENST00000416204 PRSS46E5RG02 174 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms