RNA–Protein interactions for RNA: ENST00000415560.1

HMGA1P1-201, Transcript of high mobility group AT-hook 1 pseudogene 1, humanhuman

BASIC

Gene HMGA1P1, Length 1,062 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P1-201ENST00000415560 CRISP2P16562 243 aa10.61□□□□□ -0.71
HMGA1P1-201ENST00000415560 DEFB1P60022 68 aa10.61□□□□□ -0.71
HMGA1P1-201ENST00000415560 BEAN1Q3B7T3 259 aa10.61□□□□□ -0.71
HMGA1P1-201ENST00000415560 ACTL10Q5JWF8 245 aa10.61□□□□□ -0.71
HMGA1P1-201ENST00000415560 LINC00322Q6ZN03 302 aaPredicted RBP10.61□□□□□ -0.71
HMGA1P1-201ENST00000415560 OR2D3Q8NGH3 330 aa10.61□□□□□ -0.71
HMGA1P1-201ENST00000415560 FAM19A4Q96LR4 140 aa10.61□□□□□ -0.71
HMGA1P1-201ENST00000415560 URGCP-MRPS24S4R325 110 aa10.61□□□□□ -0.71
HMGA1P1-201ENST00000415560 HLA-DRB4X5D2U9 266 aa10.61□□□□□ -0.71
HMGA1P1-201ENST00000415560 FAM231BA6NCW3 169 aa10.6□□□□□ -0.71
HMGA1P1-201ENST00000415560 KNCNA6PVL3 124 aa10.6□□□□□ -0.71
HMGA1P1-201ENST00000415560 H3BMM0 161 aa10.6□□□□□ -0.71
HMGA1P1-201ENST00000415560 ORM1P02763 201 aa10.6□□□□□ -0.71
HMGA1P1-201ENST00000415560 CRIP1P50238 77 aa10.6□□□□□ -0.71
HMGA1P1-201ENST00000415560 ELOBQ15370 118 aa10.6□□□□□ -0.71
HMGA1P1-201ENST00000415560 GDF5OSQ5U4N7 250 aa10.6□□□□□ -0.71
HMGA1P1-201ENST00000415560 STHQ8IWL8 128 aa10.6□□□□□ -0.71
HMGA1P1-201ENST00000415560 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.6□□□□□ -0.71
HMGA1P1-201ENST00000415560 TSKUQ8WUA8 353 aa10.6□□□□□ -0.71
HMGA1P1-201ENST00000415560 CLUHP3Q96NS8 147 aa10.6□□□□□ -0.71
HMGA1P1-201ENST00000415560 GFRA4Q9GZZ7 299 aa10.6□□□□□ -0.71
HMGA1P1-201ENST00000415560 IGKV3-20P01619 116 aa10.59□□□□□ -0.71
HMGA1P1-201ENST00000415560 RNASE4P34096 147 aaKnown RBP10.59□□□□□ -0.71
HMGA1P1-201ENST00000415560 CDKN1BP46527 198 aa10.59□□□□□ -0.71
HMGA1P1-201ENST00000415560 FAM3BP58499 235 aaPredicted RBP10.59□□□□□ -0.71
HMGA1P1-201ENST00000415560 GTSCR1Q86UQ5 136 aa10.59□□□□□ -0.71
HMGA1P1-201ENST00000415560 APRG1Q8IVJ8 170 aa10.59□□□□□ -0.71
HMGA1P1-201ENST00000415560 ZMAT5Q9UDW3 170 aaKnown RBP10.59□□□□□ -0.71
HMGA1P1-201ENST00000415560 NAT8BQ9UHF3 227 aa10.59□□□□□ -0.71
HMGA1P1-201ENST00000415560 TRBV24-1A0A075B6N3 115 aa10.58□□□□□ -0.72
HMGA1P1-201ENST00000415560 A0A1W2PPQ1 181 aa10.58□□□□□ -0.72
HMGA1P1-201ENST00000415560 SMIM27A0A1W2PRY6 76 aa10.58□□□□□ -0.72
HMGA1P1-201ENST00000415560 COLCA2A8K830 154 aa10.58□□□□□ -0.72
HMGA1P1-201ENST00000415560 J3KRW8 73 aa10.58□□□□□ -0.72
HMGA1P1-201ENST00000415560 AMBPP02760 352 aa10.58□□□□□ -0.72
HMGA1P1-201ENST00000415560 ZNF80P51504 273 aaPredicted RBP10.58□□□□□ -0.72
HMGA1P1-201ENST00000415560 NUTF2P61970 127 aaKnown RBP10.58□□□□□ -0.72
HMGA1P1-201ENST00000415560 ODF3L2Q3SX64 289 aa10.58□□□□□ -0.72
HMGA1P1-201ENST00000415560 ZFAND2AQ8N6M9 145 aa10.58□□□□□ -0.72
HMGA1P1-201ENST00000415560 NIPBLQ6KC79 2804 aaeCLIP10.58□□□□□ -0.72
HMGA1P1-201ENST00000415560 A8MTW9 85 aa10.57□□□□□ -0.72
HMGA1P1-201ENST00000415560 KLLNB2CW77 178 aa10.57□□□□□ -0.72
HMGA1P1-201ENST00000415560 IGLL1P15814 213 aa10.57□□□□□ -0.72
HMGA1P1-201ENST00000415560 LINC01559Q495D7 138 aa10.57□□□□□ -0.72
HMGA1P1-201ENST00000415560 COX19Q49B96 90 aa10.57□□□□□ -0.72
HMGA1P1-201ENST00000415560 PRR31Q5SQ13 230 aa10.57□□□□□ -0.72
HMGA1P1-201ENST00000415560 Q6AWC8 147 aa10.57□□□□□ -0.72
HMGA1P1-201ENST00000415560 BORCS7Q96B45 105 aa10.57□□□□□ -0.72
HMGA1P1-201ENST00000415560 FAM210BQ96KR6 192 aa10.57□□□□□ -0.72
HMGA1P1-201ENST00000415560 C7orf71A4D174 169 aa10.56□□□□□ -0.72
HMGA1P1-201ENST00000415560 CD7P09564 240 aa10.56□□□□□ -0.72
HMGA1P1-201ENST00000415560 KCNS1Q96KK3 526 aa10.56□□□□□ -0.72
HMGA1P1-201ENST00000415560 PYGO2Q9BRQ0 406 aa10.56□□□□□ -0.72
HMGA1P1-201ENST00000415560 JMJD1CQ15652 2540 aa10.55□□□□□ -0.72
HMGA1P1-201ENST00000415560 SETD2Q9BYW2 2564 aaPredicted RBP10.55□□□□□ -0.72
HMGA1P1-201ENST00000415560 TGIF2-C20orf24A0A0A6YYL0 155 aa10.55□□□□□ -0.72
HMGA1P1-201ENST00000415560 WIPF1O43516 503 aa10.55□□□□□ -0.72
HMGA1P1-201ENST00000415560 CA1P00915 261 aaPredicted RBP10.55□□□□□ -0.72
HMGA1P1-201ENST00000415560 FOXA3P55318 350 aaPredicted RBP10.55□□□□□ -0.72
HMGA1P1-201ENST00000415560 TCL1AP56279 114 aa10.55□□□□□ -0.72
HMGA1P1-201ENST00000415560 SPINK13Q1W4C9 94 aa10.55□□□□□ -0.72
HMGA1P1-201ENST00000415560 FAM159AQ6UWV7 190 aa10.55□□□□□ -0.72
HMGA1P1-201ENST00000415560 AMTNQ6UX39 209 aa10.55□□□□□ -0.72
HMGA1P1-201ENST00000415560 YPEL4Q96NS1 127 aa10.55□□□□□ -0.72
HMGA1P1-201ENST00000415560 NEU1Q99519 415 aa10.55□□□□□ -0.72
HMGA1P1-201ENST00000415560 TMSB15BA0A087X1C1 80 aa10.54□□□□□ -0.72
HMGA1P1-201ENST00000415560 HIGD1CA8MV81 97 aa10.54□□□□□ -0.72
HMGA1P1-201ENST00000415560 CXCL1P09341 107 aa10.54□□□□□ -0.72
HMGA1P1-201ENST00000415560 RAB5AP20339 215 aa10.54□□□□□ -0.72
HMGA1P1-201ENST00000415560 ZNF124Q15973 351 aa10.54□□□□□ -0.72
HMGA1P1-201ENST00000415560 TEP1Q99973 2627 aaKnown RBP10.54□□□□□ -0.72
HMGA1P1-201ENST00000415560 C20orf144Q9BQM9 153 aa10.54□□□□□ -0.72
HMGA1P1-201ENST00000415560 TRAV12-3A0A0B4J271 114 aa10.53□□□□□ -0.72
HMGA1P1-201ENST00000415560 M0R2Z0 102 aa10.53□□□□□ -0.72
HMGA1P1-201ENST00000415560 RPS10P46783 165 aaKnown RBP10.53□□□□□ -0.72
HMGA1P1-201ENST00000415560 PRR9Q5T870 116 aa10.53□□□□□ -0.72
HMGA1P1-201ENST00000415560 MORN3Q6PF18 240 aaPredicted RBP10.53□□□□□ -0.72
HMGA1P1-201ENST00000415560 TRPT1Q86TN4 253 aaKnown RBP10.53□□□□□ -0.72
HMGA1P1-201ENST00000415560 NUP35Q8NFH5 326 aa10.53□□□□□ -0.72
HMGA1P1-201ENST00000415560 PGLYRP4Q96LB8 373 aa10.53□□□□□ -0.72
HMGA1P1-201ENST00000415560 NAGKQ9UJ70 344 aa10.53□□□□□ -0.72
HMGA1P1-201ENST00000415560 TRAV12-2A0A075B6T6 113 aa10.52□□□□□ -0.73
HMGA1P1-201ENST00000415560 F2Z2F3 143 aa10.52□□□□□ -0.73
HMGA1P1-201ENST00000415560 TYMSP04818 313 aa10.52□□□□□ -0.73
HMGA1P1-201ENST00000415560 RIGQ13278 110 aa10.52□□□□□ -0.73
HMGA1P1-201ENST00000415560 GFI1BQ5VTD9 330 aa10.52□□□□□ -0.73
HMGA1P1-201ENST00000415560 WDR73Q6P4I2 378 aa10.52□□□□□ -0.73
HMGA1P1-201ENST00000415560 RASL11AQ6T310 242 aa10.52□□□□□ -0.73
HMGA1P1-201ENST00000415560 ATP5L2Q7Z4Y8 100 aa10.52□□□□□ -0.73
HMGA1P1-201ENST00000415560 SPATA3Q8NHX4 192 aa10.52□□□□□ -0.73
HMGA1P1-201ENST00000415560 C1QTNF4Q9BXJ3 329 aa10.52□□□□□ -0.73
HMGA1P1-201ENST00000415560 SRD5A3Q9H8P0 318 aa10.52□□□□□ -0.73
HMGA1P1-201ENST00000415560 C19orf73Q9NVV2 129 aa10.52□□□□□ -0.73
HMGA1P1-201ENST00000415560 IGKV3D-20A0A0C4DH25 116 aa10.51□□□□□ -0.73
HMGA1P1-201ENST00000415560 A0A1B0GW15 77 aa10.51□□□□□ -0.73
HMGA1P1-201ENST00000415560 GRIFINA4D1Z8 144 aa10.51□□□□□ -0.73
HMGA1P1-201ENST00000415560 ZNF324O75467 553 aaPredicted RBP10.51□□□□□ -0.73
HMGA1P1-201ENST00000415560 INSP01308 110 aa10.51□□□□□ -0.73
HMGA1P1-201ENST00000415560 S100A8P05109 93 aa10.51□□□□□ -0.73
HMGA1P1-201ENST00000415560 GZMBP10144 247 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms