RNA–Protein interactions for RNA: ENST00000413232.5

CPSF7-204, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-204ENST00000413232 MDFICQ9P1T7 246 aa13.13□□□□□ -0.31
CPSF7-204ENST00000413232 PRAF2O60831 178 aa13.12□□□□□ -0.31
CPSF7-204ENST00000413232 NXPH4O95158 308 aa13.12□□□□□ -0.31
CPSF7-204ENST00000413232 H2BFSP57053 126 aa13.12□□□□□ -0.31
CPSF7-204ENST00000413232 RANP62826 216 aaKnown RBP13.12□□□□□ -0.31
CPSF7-204ENST00000413232 MUC21Q5SSG8 566 aa13.12□□□□□ -0.31
CPSF7-204ENST00000413232 C8orf49Q96NF6 230 aa13.12□□□□□ -0.31
CPSF7-204ENST00000413232 MRPL32Q9BYC8 188 aaKnown RBP13.12□□□□□ -0.31
CPSF7-204ENST00000413232 ICOSQ9Y6W8 199 aa13.12□□□□□ -0.31
CPSF7-204ENST00000413232 LYPD5Q6UWN5 251 aa13.11□□□□□ -0.31
CPSF7-204ENST00000413232 LINC00299Q6ZSB3 139 aa13.11□□□□□ -0.31
CPSF7-204ENST00000413232 ENKURQ8TC29 256 aa13.11□□□□□ -0.31
CPSF7-204ENST00000413232 ARPC5LQ9BPX5 153 aa13.11□□□□□ -0.31
CPSF7-204ENST00000413232 PRO0255Q9UI72 69 aa13.11□□□□□ -0.31
CPSF7-204ENST00000413232 HHLA3Q9XRX5 114 aa13.11□□□□□ -0.31
CPSF7-204ENST00000413232 OR7C2O60412 319 aa13.1□□□□□ -0.31
CPSF7-204ENST00000413232 UPK1BO75841 260 aa13.1□□□□□ -0.31
CPSF7-204ENST00000413232 SFTA3P0C7M3 94 aa13.1□□□□□ -0.31
CPSF7-204ENST00000413232 ZNF266Q14584 549 aa13.1□□□□□ -0.31
CPSF7-204ENST00000413232 SCRT2Q9NQ03 307 aa13.1□□□□□ -0.31
CPSF7-204ENST00000413232 TRBV7-9A0A0J9YWB2 115 aa13.09□□□□□ -0.31
CPSF7-204ENST00000413232 PPP1R1CQ8WVI7 109 aa13.09□□□□□ -0.31
CPSF7-204ENST00000413232 S100ZQ8WXG8 99 aa13.09□□□□□ -0.31
CPSF7-204ENST00000413232 RBAKDNA6NC62 111 aa13.08□□□□□ -0.32
CPSF7-204ENST00000413232 ZNF415Q09FC8 603 aa13.08□□□□□ -0.32
CPSF7-204ENST00000413232 FFAR4Q5NUL3 377 aa13.08□□□□□ -0.32
CPSF7-204ENST00000413232 ZNF479Q96JC4 524 aa13.08□□□□□ -0.32
CPSF7-204ENST00000413232 ATP5SQ99766 215 aa13.08□□□□□ -0.32
CPSF7-204ENST00000413232 DIRC3C9JPN6 131 aa13.07□□□□□ -0.32
CPSF7-204ENST00000413232 INMT-MINDY4F8WBC2 141 aa13.07□□□□□ -0.32
CPSF7-204ENST00000413232 UBE2L3P68036 154 aaKnown RBP13.07□□□□□ -0.32
CPSF7-204ENST00000413232 Q6AWC8 147 aa13.07□□□□□ -0.32
CPSF7-204ENST00000413232 LYPD1Q8N2G4 141 aa13.07□□□□□ -0.32
CPSF7-204ENST00000413232 SMIM3Q9BZL3 60 aa13.07□□□□□ -0.32
CPSF7-204ENST00000413232 KCNIP2Q9NS61 270 aa13.07□□□□□ -0.32
CPSF7-204ENST00000413232 HSPB11Q9Y547 144 aa13.07□□□□□ -0.32
CPSF7-204ENST00000413232 C17orf112F2Z3M2 114 aa13.06□□□□□ -0.32
CPSF7-204ENST00000413232 CSN1S1P47710 185 aa13.06□□□□□ -0.32
CPSF7-204ENST00000413232 CYCSP99999 105 aaKnown RBP13.06□□□□□ -0.32
CPSF7-204ENST00000413232 MRPL23Q16540 153 aaKnown RBP13.06□□□□□ -0.32
CPSF7-204ENST00000413232 TMEM183BQ1AE95 376 aa13.06□□□□□ -0.32
CPSF7-204ENST00000413232 TMEM183AQ8IXX5 376 aa13.06□□□□□ -0.32
CPSF7-204ENST00000413232 WFDC1Q9HC57 220 aa13.06□□□□□ -0.32
CPSF7-204ENST00000413232 TRGV4A0A0C4DH28 118 aa13.05□□□□□ -0.32
CPSF7-204ENST00000413232 K7EQD1 137 aa13.05□□□□□ -0.32
CPSF7-204ENST00000413232 MPC2O95563 127 aa13.05□□□□□ -0.32
CPSF7-204ENST00000413232 SLAQ13239 276 aa13.05□□□□□ -0.32
CPSF7-204ENST00000413232 NEGR1Q7Z3B1 354 aa13.05□□□□□ -0.32
CPSF7-204ENST00000413232 RASL10AQ92737 203 aa13.05□□□□□ -0.32
CPSF7-204ENST00000413232 HYLS1Q96M11 299 aa13.05□□□□□ -0.32
CPSF7-204ENST00000413232 MARVELD1Q9BSK0 173 aa13.05□□□□□ -0.32
CPSF7-204ENST00000413232 GNRH2O43555 120 aa13.04□□□□□ -0.32
CPSF7-204ENST00000413232 DNAH10OSP0CZ25 163 aa13.04□□□□□ -0.32
CPSF7-204ENST00000413232 WFDC10BQ8IUB3 73 aa13.04□□□□□ -0.32
CPSF7-204ENST00000413232 IQCF2Q8IXL9 164 aa13.04□□□□□ -0.32
CPSF7-204ENST00000413232 OR10G4Q8NGN3 311 aa13.04□□□□□ -0.32
CPSF7-204ENST00000413232 TVP23CQ96ET8 276 aa13.04□□□□□ -0.32
CPSF7-204ENST00000413232 LENEPQ9Y5L5 61 aa13.03□□□□□ -0.32
CPSF7-204ENST00000413232 PGPA6NDG6 321 aa13.02□□□□□ -0.33
CPSF7-204ENST00000413232 GYPEP15421 78 aa13.02□□□□□ -0.33
CPSF7-204ENST00000413232 RPL12P30050 165 aaKnown RBP13.02□□□□□ -0.33
CPSF7-204ENST00000413232 KHDC3LQ587J8 217 aa13.02□□□□□ -0.33
CPSF7-204ENST00000413232 FAM159AQ6UWV7 190 aa13.02□□□□□ -0.33
CPSF7-204ENST00000413232 NAGKQ9UJ70 344 aa13.02□□□□□ -0.33
CPSF7-204ENST00000413232 RPH3ALQ9UNE2 315 aa13.02□□□□□ -0.33
CPSF7-204ENST00000413232 FAT1Q14517 4588 aa13.01□□□□□ -0.33
CPSF7-204ENST00000413232 TRAV8-1A0A0A6YYK1 113 aa13.01□□□□□ -0.33
CPSF7-204ENST00000413232 LOC100131303A0A0U1RQF7 123 aa13.01□□□□□ -0.33
CPSF7-204ENST00000413232 XGP55808 180 aa13.01□□□□□ -0.33
CPSF7-204ENST00000413232 TDRG1Q3Y452 100 aa13.01□□□□□ -0.33
CPSF7-204ENST00000413232 SCGB1C1Q8TD33 95 aa13.01□□□□□ -0.33
CPSF7-204ENST00000413232 SPXQ9BT56 116 aa13.01□□□□□ -0.33
CPSF7-204ENST00000413232 OTORQ9NRC9 128 aa13.01□□□□□ -0.33
CPSF7-204ENST00000413232 PGPEP1Q9NXJ5 209 aa13.01□□□□□ -0.33
CPSF7-204ENST00000413232 MBD2Q9UBB5 411 aa13.01□□□□□ -0.33
CPSF7-204ENST00000413232 TRGV11A0A075B6L2 103 aa13□□□□□ -0.33
CPSF7-204ENST00000413232 A0A087WTM6 91 aa13□□□□□ -0.33
CPSF7-204ENST00000413232 IGHV3-16A0A0C4DH30 117 aa13□□□□□ -0.33
CPSF7-204ENST00000413232 IFNA5P01569 189 aa13□□□□□ -0.33
CPSF7-204ENST00000413232 SRIP30626 198 aa13□□□□□ -0.33
CPSF7-204ENST00000413232 TAS2R45P59539 299 aa13□□□□□ -0.33
CPSF7-204ENST00000413232 TMED6Q8WW62 240 aa13□□□□□ -0.33
CPSF7-204ENST00000413232 LY96Q9Y6Y9 160 aa13□□□□□ -0.33
CPSF7-204ENST00000413232 A6NHS1 94 aa12.99□□□□□ -0.33
CPSF7-204ENST00000413232 F6UZH7 168 aa12.99□□□□□ -0.33
CPSF7-204ENST00000413232 HMGB3O15347 200 aaKnown RBP12.99□□□□□ -0.33
CPSF7-204ENST00000413232 SSNA1O43805 119 aa12.99□□□□□ -0.33
CPSF7-204ENST00000413232 ERVFC1-1P60608 527 aa12.99□□□□□ -0.33
CPSF7-204ENST00000413232 RAB2AP61019 212 aa12.99□□□□□ -0.33
CPSF7-204ENST00000413232 GNG5P63218 68 aa12.99□□□□□ -0.33
CPSF7-204ENST00000413232 GOLT1AQ6ZVE7 132 aa12.99□□□□□ -0.33
CPSF7-204ENST00000413232 TRAV4A0A0B4J268 109 aa12.98□□□□□ -0.33
CPSF7-204ENST00000413232 TYMSP04818 313 aa12.98□□□□□ -0.33
CPSF7-204ENST00000413232 KRTAP10-1P60331 282 aa12.98□□□□□ -0.33
CPSF7-204ENST00000413232 SGK494Q96LW2 274 aa12.98□□□□□ -0.33
CPSF7-204ENST00000413232 M0R2P5 195 aa12.97□□□□□ -0.33
CPSF7-204ENST00000413232 NFE4Q86UQ8 179 aa12.97□□□□□ -0.33
CPSF7-204ENST00000413232 OR4C5Q8NGB2 326 aa12.97□□□□□ -0.33
CPSF7-204ENST00000413232 CMTM2Q8TAZ6 248 aa12.97□□□□□ -0.33
CPSF7-204ENST00000413232 MSRB1Q9NZV6 116 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms