RNA–Protein interactions for RNA: ENST00000409472.5

SCAMP4-202, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2 BASIC

Gene SCAMP4, Length 2,394 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-202ENST00000409472 URB1-AS1Q96HZ7 61 aa11.71□□□□□ -0.53
SCAMP4-202ENST00000409472 CLEC5AQ9NY25 188 aa11.71□□□□□ -0.53
SCAMP4-202ENST00000409472 TMSB15BA0A087X1C1 80 aa11.71□□□□□ -0.54
SCAMP4-202ENST00000409472 PRAC2D3DTV9 90 aa11.71□□□□□ -0.54
SCAMP4-202ENST00000409472 SYS1-DBNDD2H3BUS1 97 aa11.71□□□□□ -0.54
SCAMP4-202ENST00000409472 ARMS2P0C7Q2 107 aa11.71□□□□□ -0.54
SCAMP4-202ENST00000409472 OR2K2Q8NGT1 345 aa11.71□□□□□ -0.54
SCAMP4-202ENST00000409472 A0A087X0K7 114 aa11.7□□□□□ -0.54
SCAMP4-202ENST00000409472 TRAV41A0A0B4J266 112 aa11.7□□□□□ -0.54
SCAMP4-202ENST00000409472 H3BUX3 64 aa11.7□□□□□ -0.54
SCAMP4-202ENST00000409472 K7EQM0 130 aa11.7□□□□□ -0.54
SCAMP4-202ENST00000409472 BUB3O43684 328 aa11.7□□□□□ -0.54
SCAMP4-202ENST00000409472 TRBV12-3P01733 135 aa11.7□□□□□ -0.54
SCAMP4-202ENST00000409472 MSMBP08118 114 aa11.7□□□□□ -0.54
SCAMP4-202ENST00000409472 SPATA12Q7Z6I5 190 aa11.7□□□□□ -0.54
SCAMP4-202ENST00000409472 GFRA4Q9GZZ7 299 aa11.7□□□□□ -0.54
SCAMP4-202ENST00000409472 TPPP3Q9BW30 176 aa11.7□□□□□ -0.54
SCAMP4-202ENST00000409472 MXRA5Q9NR99 2828 aa11.7□□□□□ -0.54
SCAMP4-202ENST00000409472 A1L4Q6 167 aa11.69□□□□□ -0.54
SCAMP4-202ENST00000409472 ZNF80P51504 273 aaPredicted RBP11.69□□□□□ -0.54
SCAMP4-202ENST00000409472 SRSF1Q07955 248 aaKnown RBP eCLIP11.69□□□□□ -0.54
SCAMP4-202ENST00000409472 SMAGPQ0VAQ4 97 aa11.69□□□□□ -0.54
SCAMP4-202ENST00000409472 LCNL1Q6ZST4 164 aa11.69□□□□□ -0.54
SCAMP4-202ENST00000409472 MAPK1IP1LQ8NDC0 245 aa11.69□□□□□ -0.54
SCAMP4-202ENST00000409472 NPFFR1Q9GZQ6 430 aa11.69□□□□□ -0.54
SCAMP4-202ENST00000409472 HIF1ANQ9NWT6 349 aa11.69□□□□□ -0.54
SCAMP4-202ENST00000409472 TMEM97Q5BJF2 176 aa11.69□□□□□ -0.54
SCAMP4-202ENST00000409472 OR10AG1Q8NH19 301 aa11.69□□□□□ -0.54
SCAMP4-202ENST00000409472 EEF1AKMT3Q96AZ1 226 aa11.69□□□□□ -0.54
SCAMP4-202ENST00000409472 SH2D1AO60880 128 aa11.68□□□□□ -0.54
SCAMP4-202ENST00000409472 RAB9AP51151 201 aa11.68□□□□□ -0.54
SCAMP4-202ENST00000409472 BLCAPP62952 87 aa11.68□□□□□ -0.54
SCAMP4-202ENST00000409472 ERCC8Q13216 396 aa11.68□□□□□ -0.54
SCAMP4-202ENST00000409472 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.68□□□□□ -0.54
SCAMP4-202ENST00000409472 GTSF1LQ9H1H1 148 aa11.68□□□□□ -0.54
SCAMP4-202ENST00000409472 SCGB2A1O75556 95 aa11.68□□□□□ -0.54
SCAMP4-202ENST00000409472 CSN1S1P47710 185 aa11.68□□□□□ -0.54
SCAMP4-202ENST00000409472 HSD52Q0P140 79 aa11.68□□□□□ -0.54
SCAMP4-202ENST00000409472 LEPROTL1O95214 131 aa11.67□□□□□ -0.54
SCAMP4-202ENST00000409472 TRGV3P03979 118 aa11.67□□□□□ -0.54
SCAMP4-202ENST00000409472 CHCHD1Q96BP2 118 aaKnown RBP11.67□□□□□ -0.54
SCAMP4-202ENST00000409472 PRR25Q96S07 402 aa11.67□□□□□ -0.54
SCAMP4-202ENST00000409472 NBPF19A0A087WUL8 3843 aa11.67□□□□□ -0.54
SCAMP4-202ENST00000409472 H3BUT2 72 aa11.67□□□□□ -0.54
SCAMP4-202ENST00000409472 COX8AP10176 69 aa11.67□□□□□ -0.54
SCAMP4-202ENST00000409472 CKS1BP61024 79 aa11.67□□□□□ -0.54
SCAMP4-202ENST00000409472 KMT2BQ9UMN6 2715 aaPredicted RBP11.66□□□□□ -0.54
SCAMP4-202ENST00000409472 A0A0G2JLM5 398 aa11.66□□□□□ -0.54
SCAMP4-202ENST00000409472 J3QR89 54 aa11.66□□□□□ -0.54
SCAMP4-202ENST00000409472 ATP5G2Q06055 141 aa11.66□□□□□ -0.54
SCAMP4-202ENST00000409472 UNQ9165/PRO28630Q6UXU0 137 aa11.66□□□□□ -0.54
SCAMP4-202ENST00000409472 JMJD8Q96S16 334 aa11.66□□□□□ -0.54
SCAMP4-202ENST00000409472 MAP1LC3CQ9BXW4 147 aa11.66□□□□□ -0.54
SCAMP4-202ENST00000409472 KLK15Q9H2R5 256 aa11.66□□□□□ -0.54
SCAMP4-202ENST00000409472 A6NDX4 124 aa11.65□□□□□ -0.54
SCAMP4-202ENST00000409472 HAX1O00165 279 aa11.65□□□□□ -0.54
SCAMP4-202ENST00000409472 IGHV3-11P01762 117 aa11.65□□□□□ -0.54
SCAMP4-202ENST00000409472 OR5AL1P0C617 328 aa11.65□□□□□ -0.54
SCAMP4-202ENST00000409472 CT45A10P0DMU9 189 aa11.65□□□□□ -0.54
SCAMP4-202ENST00000409472 ZNF138P52744 262 aa11.65□□□□□ -0.54
SCAMP4-202ENST00000409472 TMEM95Q3KNT9 176 aa11.65□□□□□ -0.54
SCAMP4-202ENST00000409472 TCTEX1D4Q5JR98 221 aa11.65□□□□□ -0.54
SCAMP4-202ENST00000409472 MTURNQ8N3F0 131 aa11.65□□□□□ -0.54
SCAMP4-202ENST00000409472 ZNF469Q96JG9 3925 aaPredicted RBP11.65□□□□□ -0.54
SCAMP4-202ENST00000409472 TRBV7-1A0A0A6YYK4 115 aa11.65□□□□□ -0.54
SCAMP4-202ENST00000409472 TRAV8-2A0A0B4J237 113 aa11.65□□□□□ -0.54
SCAMP4-202ENST00000409472 A0A1B0GUT8 65 aa11.65□□□□□ -0.54
SCAMP4-202ENST00000409472 FA2HQ7L5A8 372 aa11.65□□□□□ -0.54
SCAMP4-202ENST00000409472 ZNF575Q86XF7 245 aa11.65□□□□□ -0.54
SCAMP4-202ENST00000409472 SPCS1Q9Y6A9 102 aa11.65□□□□□ -0.54
SCAMP4-202ENST00000409472 SELENOKQ9Y6D0 94 aa11.65□□□□□ -0.54
SCAMP4-202ENST00000409472 RPL24P83731 157 aaKnown RBP11.64□□□□□ -0.55
SCAMP4-202ENST00000409472 CD300EQ496F6 205 aaPredicted RBP11.64□□□□□ -0.55
SCAMP4-202ENST00000409472 TMEM213A2RRL7 107 aa11.64□□□□□ -0.55
SCAMP4-202ENST00000409472 CRIP2P52943 208 aaPredicted RBP11.64□□□□□ -0.55
SCAMP4-202ENST00000409472 C2orf91Q6ZV80 131 aa11.64□□□□□ -0.55
SCAMP4-202ENST00000409472 TMEM189A5PLL7 270 aa11.63□□□□□ -0.55
SCAMP4-202ENST00000409472 PPIFP30405 207 aaKnown RBP11.63□□□□□ -0.55
SCAMP4-202ENST00000409472 CRYBA4P53673 196 aa11.63□□□□□ -0.55
SCAMP4-202ENST00000409472 KRTAP10-9P60411 292 aa11.63□□□□□ -0.55
SCAMP4-202ENST00000409472 LYZL1Q6UWQ5 148 aa11.63□□□□□ -0.55
SCAMP4-202ENST00000409472 TRAV26-1A0A087WT03 109 aa11.63□□□□□ -0.55
SCAMP4-202ENST00000409472 A0A096LNT2 108 aa11.63□□□□□ -0.55
SCAMP4-202ENST00000409472 IGHV1-24A0A0C4DH33 117 aa11.63□□□□□ -0.55
SCAMP4-202ENST00000409472 A0A1W2PPM0 123 aa11.63□□□□□ -0.55
SCAMP4-202ENST00000409472 IGF1P05019 195 aa11.63□□□□□ -0.55
SCAMP4-202ENST00000409472 IL17RELQ6ZVW7 336 aa11.63□□□□□ -0.55
SCAMP4-202ENST00000409472 ZNF843Q8N446 348 aa11.63□□□□□ -0.55
SCAMP4-202ENST00000409472 METTL26Q96S19 204 aa11.63□□□□□ -0.55
SCAMP4-202ENST00000409472 NAV2Q8IVL1 2488 aa11.62□□□□□ -0.55
SCAMP4-202ENST00000409472 GAGE12HA6NDE8 117 aa11.62□□□□□ -0.55
SCAMP4-202ENST00000409472 SMAD7O15105 426 aaKnown RBP11.62□□□□□ -0.55
SCAMP4-202ENST00000409472 IGHG2P01859 326 aa11.62□□□□□ -0.55
SCAMP4-202ENST00000409472 ARL3P36405 182 aa11.62□□□□□ -0.55
SCAMP4-202ENST00000409472 C8orf86Q6ZUL3 223 aa11.62□□□□□ -0.55
SCAMP4-202ENST00000409472 LINC00173Q6ZV60 143 aa11.62□□□□□ -0.55
SCAMP4-202ENST00000409472 TMEM190Q8WZ59 177 aa11.62□□□□□ -0.55
SCAMP4-202ENST00000409472 PSMG3-AS1Q96PY0 264 aa11.62□□□□□ -0.55
SCAMP4-202ENST00000409472 HSPB8Q9UJY1 196 aa11.62□□□□□ -0.55
SCAMP4-202ENST00000409472 TEX15Q9BXT5 2789 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 115.3 ms