RNA–Protein interactions for RNA: ENST00000406438.4

SMCR8-201, Transcript of Smith-Magenis syndrome chromosome region, candidate 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCR8, Length 8,279 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCR8-201ENST00000406438 GAGE6Q13070 117 aa9.69□□□□□ -0.86
SMCR8-201ENST00000406438 Q71RC1 249 aaPredicted RBP9.69□□□□□ -0.86
SMCR8-201ENST00000406438 HLA-DRB4X5D2U9 266 aa9.69□□□□□ -0.86
SMCR8-201ENST00000406438 LINC00205P59089 165 aa9.69□□□□□ -0.86
SMCR8-201ENST00000406438 IGHV1OR15-1A0A075B7D0 117 aa9.69□□□□□ -0.86
SMCR8-201ENST00000406438 GAGE7O76087 117 aa9.69□□□□□ -0.86
SMCR8-201ENST00000406438 GAGE12FP0CL80 117 aa9.69□□□□□ -0.86
SMCR8-201ENST00000406438 GAGE12GP0CL81 117 aa9.69□□□□□ -0.86
SMCR8-201ENST00000406438 GAGE12IP0CL82 117 aa9.69□□□□□ -0.86
SMCR8-201ENST00000406438 ZNF134P52741 427 aa9.69□□□□□ -0.86
SMCR8-201ENST00000406438 MAPK1IP1LQ8NDC0 245 aa9.69□□□□□ -0.86
SMCR8-201ENST00000406438 LINC00479Q96M42 142 aa9.69□□□□□ -0.86
SMCR8-201ENST00000406438 CYTL1Q9NRR1 136 aa9.69□□□□□ -0.86
SMCR8-201ENST00000406438 CRLF1O75462 422 aa9.68□□□□□ -0.86
SMCR8-201ENST00000406438 YPEL3P61236 119 aaPredicted RBP9.68□□□□□ -0.86
SMCR8-201ENST00000406438 TEX48A0A1B0GUV7 120 aa9.68□□□□□ -0.86
SMCR8-201ENST00000406438 KNCNA6PVL3 124 aa9.68□□□□□ -0.86
SMCR8-201ENST00000406438 HAMPP81172 84 aa9.68□□□□□ -0.86
SMCR8-201ENST00000406438 PRSS29PA6NIE9 313 aa9.68□□□□□ -0.86
SMCR8-201ENST00000406438 K7ENP7 123 aa9.68□□□□□ -0.86
SMCR8-201ENST00000406438 FAM231BA6NCW3 169 aa9.68□□□□□ -0.86
SMCR8-201ENST00000406438 NDUFA4O00483 81 aa9.68□□□□□ -0.86
SMCR8-201ENST00000406438 HERVK_113P63121 156 aa9.67□□□□□ -0.86
SMCR8-201ENST00000406438 SMIM2Q9BVW6 85 aa9.67□□□□□ -0.86
SMCR8-201ENST00000406438 TECTAO75443 2155 aa9.67□□□□□ -0.86
SMCR8-201ENST00000406438 ZNF833PQ6ZTB9 187 aa9.67□□□□□ -0.86
SMCR8-201ENST00000406438 NDUFA4L2Q9NRX3 87 aa9.67□□□□□ -0.86
SMCR8-201ENST00000406438 ZNRF2Q8NHG8 242 aa9.67□□□□□ -0.86
SMCR8-201ENST00000406438 LYL1P12980 280 aa9.67□□□□□ -0.86
SMCR8-201ENST00000406438 Q8N8P6 123 aa9.67□□□□□ -0.86
SMCR8-201ENST00000406438 TRAV12-2A0A075B6T6 113 aa9.67□□□□□ -0.86
SMCR8-201ENST00000406438 DLEU1O43261 78 aa9.67□□□□□ -0.86
SMCR8-201ENST00000406438 FGF6P10767 208 aa9.67□□□□□ -0.86
SMCR8-201ENST00000406438 QRFPP83859 136 aa9.67□□□□□ -0.86
SMCR8-201ENST00000406438 CLPSL2Q6UWE3 100 aa9.67□□□□□ -0.86
SMCR8-201ENST00000406438 UTF1Q5T230 341 aa9.66□□□□□ -0.86
SMCR8-201ENST00000406438 TRAV12-1A0A0B4J245 112 aa9.66□□□□□ -0.86
SMCR8-201ENST00000406438 IGHV1-24A0A0C4DH33 117 aa9.66□□□□□ -0.86
SMCR8-201ENST00000406438 C2orf66Q6UXQ4 117 aa9.66□□□□□ -0.86
SMCR8-201ENST00000406438 ZNF492Q9P255 531 aa9.66□□□□□ -0.86
SMCR8-201ENST00000406438 B3GALT5-AS1P59052 145 aa9.66□□□□□ -0.86
SMCR8-201ENST00000406438 SDHAF1A6NFY7 115 aa9.66□□□□□ -0.86
SMCR8-201ENST00000406438 MORN5Q5VZ52 161 aa9.66□□□□□ -0.86
SMCR8-201ENST00000406438 FAM104BQ5XKR9 115 aa9.66□□□□□ -0.86
SMCR8-201ENST00000406438 CFHR4Q92496 578 aa9.66□□□□□ -0.86
SMCR8-201ENST00000406438 C17orf82Q86X59 251 aaPredicted RBP9.65□□□□□ -0.86
SMCR8-201ENST00000406438 OR11H6Q8NGC7 330 aa9.65□□□□□ -0.86
SMCR8-201ENST00000406438 TSSC4Q9Y5U2 329 aaPredicted RBP9.65□□□□□ -0.86
SMCR8-201ENST00000406438 F8W1H4 67 aa9.65□□□□□ -0.86
SMCR8-201ENST00000406438 RSPO3Q9BXY4 272 aaPredicted RBP9.65□□□□□ -0.86
SMCR8-201ENST00000406438 IFITM1P13164 125 aa9.65□□□□□ -0.86
SMCR8-201ENST00000406438 IGKV2D-24A0A075B6R9 120 aa9.65□□□□□ -0.86
SMCR8-201ENST00000406438 MLANAQ16655 118 aa9.65□□□□□ -0.86
SMCR8-201ENST00000406438 TMEM213A2RRL7 107 aa9.65□□□□□ -0.86
SMCR8-201ENST00000406438 TRACP01848 142 aa9.65□□□□□ -0.86
SMCR8-201ENST00000406438 NXPH4O95158 308 aa9.64□□□□□ -0.87
SMCR8-201ENST00000406438 MRPL51Q4U2R6 128 aaKnown RBP9.64□□□□□ -0.87
SMCR8-201ENST00000406438 Q0VG73 95 aa9.64□□□□□ -0.87
SMCR8-201ENST00000406438 ATP6V0BQ99437 205 aa9.64□□□□□ -0.87
SMCR8-201ENST00000406438 CPAMD8Q8IZJ3 1885 aa9.64□□□□□ -0.87
SMCR8-201ENST00000406438 ZNRD1Q9P1U0 126 aa9.64□□□□□ -0.87
SMCR8-201ENST00000406438 DEFB105AQ8NG35 78 aa9.64□□□□□ -0.87
SMCR8-201ENST00000406438 CITED1Q99966 193 aa9.64□□□□□ -0.87
SMCR8-201ENST00000406438 IGHV3-38A0A0C4DH36 116 aa9.64□□□□□ -0.87
SMCR8-201ENST00000406438 TEX36Q5VZQ5 186 aa9.64□□□□□ -0.87
SMCR8-201ENST00000406438 PRO1854Q9UHT4 67 aa9.64□□□□□ -0.87
SMCR8-201ENST00000406438 COL4A6Q14031 1691 aa9.64□□□□□ -0.87
SMCR8-201ENST00000406438 TRBV19A0A075B6N1 114 aa9.63□□□□□ -0.87
SMCR8-201ENST00000406438 CEND1Q8N111 149 aa9.63□□□□□ -0.87
SMCR8-201ENST00000406438 TRAV26-2A0A0B4J265 109 aa9.63□□□□□ -0.87
SMCR8-201ENST00000406438 G3V318 75 aa9.63□□□□□ -0.87
SMCR8-201ENST00000406438 C9orf118A6NHY6 69 aa9.63□□□□□ -0.87
SMCR8-201ENST00000406438 PPDPFLQ8WWR9 84 aa9.63□□□□□ -0.87
SMCR8-201ENST00000406438 RPL18AQ02543 176 aaKnown RBP9.63□□□□□ -0.87
SMCR8-201ENST00000406438 Q8TCH9 128 aa9.63□□□□□ -0.87
SMCR8-201ENST00000406438 A0A096LPF7 62 aa9.62□□□□□ -0.87
SMCR8-201ENST00000406438 IGKV1-39P01597 117 aa9.62□□□□□ -0.87
SMCR8-201ENST00000406438 IGKV1D-39P04432 117 aa9.62□□□□□ -0.87
SMCR8-201ENST00000406438 NDUFA12Q9UI09 145 aa9.62□□□□□ -0.87
SMCR8-201ENST00000406438 C5orf63A6NC05 138 aa9.62□□□□□ -0.87
SMCR8-201ENST00000406438 CR1LQ2VPA4 569 aa9.62□□□□□ -0.87
SMCR8-201ENST00000406438 SMIM27A0A1W2PRY6 76 aa9.62□□□□□ -0.87
SMCR8-201ENST00000406438 C5orf24Q7Z6I8 188 aa9.62□□□□□ -0.87
SMCR8-201ENST00000406438 MRPL53Q96EL3 112 aaKnown RBP9.62□□□□□ -0.87
SMCR8-201ENST00000406438 TMEM14CQ9P0S9 112 aa9.62□□□□□ -0.87
SMCR8-201ENST00000406438 ABCA2Q9BZC7 2435 aa9.62□□□□□ -0.87
SMCR8-201ENST00000406438 CHKB-CPT1BH3BT56 60 aa9.62□□□□□ -0.87
SMCR8-201ENST00000406438 PTPRSQ13332 1948 aa9.62□□□□□ -0.87
SMCR8-201ENST00000406438 BUB3O43684 328 aa9.62□□□□□ -0.87
SMCR8-201ENST00000406438 HLA-DMBP28068 263 aa9.61□□□□□ -0.87
SMCR8-201ENST00000406438 CLPSL1A2RUU4 121 aa9.61□□□□□ -0.87
SMCR8-201ENST00000406438 LMO1P25800 156 aa9.61□□□□□ -0.87
SMCR8-201ENST00000406438 XCL1P47992 114 aa9.61□□□□□ -0.87
SMCR8-201ENST00000406438 F8VRH5 84 aa9.61□□□□□ -0.87
SMCR8-201ENST00000406438 C18orf32Q8TCD1 76 aa9.61□□□□□ -0.87
SMCR8-201ENST00000406438 J3QKU1 62 aa9.61□□□□□ -0.87
SMCR8-201ENST00000406438 CFPP27918 469 aa9.61□□□□□ -0.87
SMCR8-201ENST00000406438 NBL1P41271 181 aa9.61□□□□□ -0.87
SMCR8-201ENST00000406438 RHOHQ15669 191 aa9.61□□□□□ -0.87
SMCR8-201ENST00000406438 ZNF664Q8N3J9 261 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms