RNA–Protein interactions for RNA: ENST00000404909.5

RTN4-208, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,102 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-208ENST00000404909 ZNF80P51504 273 aaPredicted RBP2.77□□□□□ -1.97
RTN4-208ENST00000404909 SSTP61278 116 aa2.77□□□□□ -1.97
RTN4-208ENST00000404909 KIR3DS1Q14943 382 aa2.77□□□□□ -1.97
RTN4-208ENST00000404909 ELOBQ15370 118 aa2.77□□□□□ -1.97
RTN4-208ENST00000404909 FAM162BQ5T6X4 162 aa2.77□□□□□ -1.97
RTN4-208ENST00000404909 OR2D3Q8NGH3 330 aa2.77□□□□□ -1.97
RTN4-208ENST00000404909 TMEM158Q8WZ71 300 aa2.77□□□□□ -1.97
RTN4-208ENST00000404909 LINC00477Q96M19 166 aa2.77□□□□□ -1.97
RTN4-208ENST00000404909 TPPP3Q9BW30 176 aa2.77□□□□□ -1.97
RTN4-208ENST00000404909 TMEM242Q9NWH2 141 aa2.77□□□□□ -1.97
RTN4-208ENST00000404909 SIGLEC8Q9NYZ4 499 aa2.77□□□□□ -1.97
RTN4-208ENST00000404909 TRAV25A0A0B4J276 109 aa2.76□□□□□ -1.97
RTN4-208ENST00000404909 A0A0J9YX75 114 aa2.76□□□□□ -1.97
RTN4-208ENST00000404909 TRBV6-1A0A0K0K1D8 114 aa2.76□□□□□ -1.97
RTN4-208ENST00000404909 NPIPB6E9PJ23 425 aa2.76□□□□□ -1.97
RTN4-208ENST00000404909 SH2D1AO60880 128 aa2.76□□□□□ -1.97
RTN4-208ENST00000404909 IGLV1-51P01701 117 aa2.76□□□□□ -1.97
RTN4-208ENST00000404909 ORM1P02763 201 aa2.76□□□□□ -1.97
RTN4-208ENST00000404909 KCNIP4Q6PIL6 250 aa2.76□□□□□ -1.97
RTN4-208ENST00000404909 Q6ZQT7 251 aa2.76□□□□□ -1.97
RTN4-208ENST00000404909 RPP21Q9H633 154 aaKnown RBP2.76□□□□□ -1.97
RTN4-208ENST00000404909 MAP6D1Q9H9H5 199 aa2.76□□□□□ -1.97
RTN4-208ENST00000404909 NAGKQ9UJ70 344 aa2.76□□□□□ -1.97
RTN4-208ENST00000404909 ZNF256Q9Y2P7 627 aaPredicted RBP2.76□□□□□ -1.97
RTN4-208ENST00000404909 NBEAL2Q6ZNJ1 2754 aa2.76□□□□□ -1.97
RTN4-208ENST00000404909 TRAV12-2A0A075B6T6 113 aa2.76□□□□□ -1.97
RTN4-208ENST00000404909 COLCA2A8K830 154 aa2.76□□□□□ -1.97
RTN4-208ENST00000404909 M0R2Z0 102 aa2.76□□□□□ -1.97
RTN4-208ENST00000404909 CXCL1P09341 107 aa2.76□□□□□ -1.97
RTN4-208ENST00000404909 FXYD7P58549 80 aa2.76□□□□□ -1.97
RTN4-208ENST00000404909 FOXI2Q6ZQN5 318 aa2.76□□□□□ -1.97
RTN4-208ENST00000404909 FAM231DQ6ZW35 169 aa2.76□□□□□ -1.97
RTN4-208ENST00000404909 TUBA4BQ9H853 241 aa2.76□□□□□ -1.97
RTN4-208ENST00000404909 IL36BQ9NZH7 164 aa2.76□□□□□ -1.97
RTN4-208ENST00000404909 C19orf71A6NCJ1 209 aa2.76□□□□□ -1.97
RTN4-208ENST00000404909 FABP5P3A8MUU1 101 aa2.76□□□□□ -1.97
RTN4-208ENST00000404909 OR11H12B2RN74 326 aa2.76□□□□□ -1.97
RTN4-208ENST00000404909 PFN1P07737 140 aaKnown RBP2.76□□□□□ -1.97
RTN4-208ENST00000404909 CD7P09564 240 aa2.76□□□□□ -1.97
RTN4-208ENST00000404909 RPS10P46783 165 aaKnown RBP2.76□□□□□ -1.97
RTN4-208ENST00000404909 SPINK13Q1W4C9 94 aa2.76□□□□□ -1.97
RTN4-208ENST00000404909 ODF3L2Q3SX64 289 aa2.76□□□□□ -1.97
RTN4-208ENST00000404909 PRR9Q5T870 116 aa2.76□□□□□ -1.97
RTN4-208ENST00000404909 FAM210BQ96KR6 192 aa2.76□□□□□ -1.97
RTN4-208ENST00000404909 ZNF747Q9BV97 191 aa2.76□□□□□ -1.97
RTN4-208ENST00000404909 SAV1Q9H4B6 383 aaPredicted RBP2.76□□□□□ -1.97
RTN4-208ENST00000404909 NBEAL1Q6ZS30 2694 aa2.75□□□□□ -1.97
RTN4-208ENST00000404909 TRAV2A0A0B4J234 112 aa2.75□□□□□ -1.97
RTN4-208ENST00000404909 GRIFINA4D1Z8 144 aa2.75□□□□□ -1.97
RTN4-208ENST00000404909 TMEM189A5PLL7 270 aa2.75□□□□□ -1.97
RTN4-208ENST00000404909 HIGD1CA8MV81 97 aa2.75□□□□□ -1.97
RTN4-208ENST00000404909 IGLL1P15814 213 aa2.75□□□□□ -1.97
RTN4-208ENST00000404909 RAB5AP20339 215 aa2.75□□□□□ -1.97
RTN4-208ENST00000404909 MUC21Q5SSG8 566 aa2.75□□□□□ -1.97
RTN4-208ENST00000404909 ZFAND2AQ8N6M9 145 aa2.75□□□□□ -1.97
RTN4-208ENST00000404909 NEU1Q99519 415 aa2.75□□□□□ -1.97
RTN4-208ENST00000404909 WFDC10AQ9H1F0 79 aa2.75□□□□□ -1.97
RTN4-208ENST00000404909 TRAV12-3A0A0B4J271 114 aa2.75□□□□□ -1.97
RTN4-208ENST00000404909 MUC21A0A0G2JKD1 596 aa2.75□□□□□ -1.97
RTN4-208ENST00000404909 MUC21A0A140T8X8 626 aa2.75□□□□□ -1.97
RTN4-208ENST00000404909 A8MWL6 223 aa2.75□□□□□ -1.97
RTN4-208ENST00000404909 DUSP14O95147 198 aaKnown RBP2.75□□□□□ -1.97
RTN4-208ENST00000404909 C9orf66Q5T8R8 295 aa2.75□□□□□ -1.97
RTN4-208ENST00000404909 MRPL54Q6P161 138 aaKnown RBP2.75□□□□□ -1.97
RTN4-208ENST00000404909 SHISA2Q6UWI4 295 aa2.75□□□□□ -1.97
RTN4-208ENST00000404909 STHQ8IWL8 128 aa2.75□□□□□ -1.97
RTN4-208ENST00000404909 TSKUQ8WUA8 353 aa2.75□□□□□ -1.97
RTN4-208ENST00000404909 PGLYRP4Q96LB8 373 aa2.75□□□□□ -1.97
RTN4-208ENST00000404909 H3BMM0 161 aa2.75□□□□□ -1.97
RTN4-208ENST00000404909 HLA-DRB4P13762 266 aa2.75□□□□□ -1.97
RTN4-208ENST00000404909 HTN1P15515 57 aa2.75□□□□□ -1.97
RTN4-208ENST00000404909 CDKN1BP46527 198 aa2.75□□□□□ -1.97
RTN4-208ENST00000404909 RAB4BP61018 213 aa2.75□□□□□ -1.97
RTN4-208ENST00000404909 PRR31Q5SQ13 230 aa2.75□□□□□ -1.97
RTN4-208ENST00000404909 NUP35Q8NFH5 326 aa2.75□□□□□ -1.97
RTN4-208ENST00000404909 GTSF1Q8WW33 167 aa2.75□□□□□ -1.97
RTN4-208ENST00000404909 YPEL4Q96NS1 127 aa2.75□□□□□ -1.97
RTN4-208ENST00000404909 IMMP2LQ96T52 175 aa2.75□□□□□ -1.97
RTN4-208ENST00000404909 NAT8BQ9UHF3 227 aa2.75□□□□□ -1.97
RTN4-208ENST00000404909 TIMM8BQ9Y5J9 83 aaPredicted RBP2.75□□□□□ -1.97
RTN4-208ENST00000404909 LENEPQ9Y5L5 61 aa2.75□□□□□ -1.97
RTN4-208ENST00000404909 HLA-DRB4X5D2U9 266 aa2.75□□□□□ -1.97
RTN4-208ENST00000404909 TRBV24-1A0A075B6N3 115 aa2.74□□□□□ -1.97
RTN4-208ENST00000404909 TRAV21A0A0B4J279 112 aa2.74□□□□□ -1.97
RTN4-208ENST00000404909 SMIM27A0A1W2PRY6 76 aa2.74□□□□□ -1.97
RTN4-208ENST00000404909 XKRY2A2RUG3 117 aa2.74□□□□□ -1.97
RTN4-208ENST00000404909 FRMD6-AS1P0C7T7 363 aa2.74□□□□□ -1.97
RTN4-208ENST00000404909 TSPOP30536 169 aa2.74□□□□□ -1.97
RTN4-208ENST00000404909 LEPP41159 167 aa2.74□□□□□ -1.97
RTN4-208ENST00000404909 CAMPP49913 170 aa2.74□□□□□ -1.97
RTN4-208ENST00000404909 INSL3P51460 131 aa2.74□□□□□ -1.97
RTN4-208ENST00000404909 COX8CQ7Z4L0 72 aa2.74□□□□□ -1.97
RTN4-208ENST00000404909 BTF3L4Q96K17 158 aa2.74□□□□□ -1.97
RTN4-208ENST00000404909 C11orf21Q9P2W6 132 aa2.74□□□□□ -1.97
RTN4-208ENST00000404909 ANK2Q01484 3957 aa2.74□□□□□ -1.97
RTN4-208ENST00000404909 IGKV3D-20A0A0C4DH25 116 aa2.74□□□□□ -1.97
RTN4-208ENST00000404909 RPL35AP18077 110 aaKnown RBP2.74□□□□□ -1.97
RTN4-208ENST00000404909 CT83Q5H943 113 aa2.74□□□□□ -1.97
RTN4-208ENST00000404909 GFI1BQ5VTD9 330 aa2.74□□□□□ -1.97
RTN4-208ENST00000404909 GTSCR1Q86UQ5 136 aa2.74□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms