RNA–Protein interactions for RNA: ENST00000399629.5

CACNA1C-213, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-213ENST00000399629 OCIAD2Q56VL3 154 aa9.52□□□□□ -0.89
CACNA1C-213ENST00000399629 hDV102S1A0JD36 115 aa9.51□□□□□ -0.89
CACNA1C-213ENST00000399629 DNAJC9-AS1A6NH13 148 aa9.51□□□□□ -0.89
CACNA1C-213ENST00000399629 DEFB4AO15263 64 aa9.51□□□□□ -0.89
CACNA1C-213ENST00000399629 INTS1Q8N201 2190 aaKnown RBP9.51□□□□□ -0.89
CACNA1C-213ENST00000399629 IGFBPL1Q8WX77 278 aa9.51□□□□□ -0.89
CACNA1C-213ENST00000399629 ZC2HC1BQ5TFG8 222 aa9.51□□□□□ -0.89
CACNA1C-213ENST00000399629 IGLV10-54A0A075B6I4 117 aa9.51□□□□□ -0.89
CACNA1C-213ENST00000399629 SPRY2O43597 315 aa9.51□□□□□ -0.89
CACNA1C-213ENST00000399629 VOPP1Q96AW1 172 aa9.51□□□□□ -0.89
CACNA1C-213ENST00000399629 TMEM14CQ9P0S9 112 aa9.51□□□□□ -0.89
CACNA1C-213ENST00000399629 TRAV13-2A0A0B4J235 113 aa9.51□□□□□ -0.89
CACNA1C-213ENST00000399629 HEATR1Q9H583 2144 aaKnown RBP9.5□□□□□ -0.89
CACNA1C-213ENST00000399629 CRYGCP07315 174 aa9.5□□□□□ -0.89
CACNA1C-213ENST00000399629 QRFPP83859 136 aa9.5□□□□□ -0.89
CACNA1C-213ENST00000399629 IGFL2Q6UWQ7 119 aa9.5□□□□□ -0.89
CACNA1C-213ENST00000399629 RNF152Q8N8N0 203 aa9.5□□□□□ -0.89
CACNA1C-213ENST00000399629 OR11H6Q8NGC7 330 aa9.5□□□□□ -0.89
CACNA1C-213ENST00000399629 NDUFA11Q86Y39 141 aa9.5□□□□□ -0.89
CACNA1C-213ENST00000399629 PRR25Q96S07 402 aa9.5□□□□□ -0.89
CACNA1C-213ENST00000399629 ARID1AO14497 2285 aa9.5□□□□□ -0.89
CACNA1C-213ENST00000399629 TRAV1-1A0A0B4J248 108 aa9.5□□□□□ -0.89
CACNA1C-213ENST00000399629 INSL3P51460 131 aa9.5□□□□□ -0.89
CACNA1C-213ENST00000399629 BLCAPP62952 87 aa9.5□□□□□ -0.89
CACNA1C-213ENST00000399629 C11orf45Q8TAV5 145 aa9.5□□□□□ -0.89
CACNA1C-213ENST00000399629 RSPO3Q9BXY4 272 aaPredicted RBP9.5□□□□□ -0.89
CACNA1C-213ENST00000399629 SIGLEC8Q9NYZ4 499 aa9.5□□□□□ -0.89
CACNA1C-213ENST00000399629 CTSZQ9UBR2 303 aa9.5□□□□□ -0.89
CACNA1C-213ENST00000399629 VWA8A3KMH1 1905 aa9.5□□□□□ -0.89
CACNA1C-213ENST00000399629 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.5□□□□□ -0.89
CACNA1C-213ENST00000399629 IGKV2-29A2NJV5 120 aaPredicted RBP9.5□□□□□ -0.89
CACNA1C-213ENST00000399629 LINC00518Q8N0U6 118 aa9.49□□□□□ -0.89
CACNA1C-213ENST00000399629 FER1L5A0AVI2 2057 aa9.49□□□□□ -0.89
CACNA1C-213ENST00000399629 CFHR4Q92496 578 aa9.49□□□□□ -0.89
CACNA1C-213ENST00000399629 GNRH2O43555 120 aa9.49□□□□□ -0.89
CACNA1C-213ENST00000399629 AJUBAQ96IF1 538 aa9.49□□□□□ -0.89
CACNA1C-213ENST00000399629 RTTNQ86VV8 2226 aa9.49□□□□□ -0.89
CACNA1C-213ENST00000399629 HAMPP81172 84 aa9.49□□□□□ -0.89
CACNA1C-213ENST00000399629 C9orf153Q5TBE3 101 aa9.49□□□□□ -0.89
CACNA1C-213ENST00000399629 GPHB5Q86YW7 130 aa9.49□□□□□ -0.89
CACNA1C-213ENST00000399629 LRRC75A-AS1Q8N1F1 130 aa9.49□□□□□ -0.89
CACNA1C-213ENST00000399629 STPG4Q8N801 248 aa9.49□□□□□ -0.89
CACNA1C-213ENST00000399629 CITED1Q99966 193 aa9.49□□□□□ -0.89
CACNA1C-213ENST00000399629 NDUFA12Q9UI09 145 aa9.49□□□□□ -0.89
CACNA1C-213ENST00000399629 LOC105371267A0A1B0GV96 52 aa9.48□□□□□ -0.89
CACNA1C-213ENST00000399629 C15orf65H3BRN8 121 aa9.48□□□□□ -0.89
CACNA1C-213ENST00000399629 COX7A2LO14548 114 aa9.48□□□□□ -0.89
CACNA1C-213ENST00000399629 UBL5Q9BZL1 73 aa9.48□□□□□ -0.89
CACNA1C-213ENST00000399629 FANCMQ8IYD8 2048 aa9.48□□□□□ -0.89
CACNA1C-213ENST00000399629 HILS1P60008 231 aa9.48□□□□□ -0.89
CACNA1C-213ENST00000399629 AMTNQ6UX39 209 aa9.48□□□□□ -0.89
CACNA1C-213ENST00000399629 HHLA3Q9XRX5 114 aa9.48□□□□□ -0.89
CACNA1C-213ENST00000399629 SIP14410 1827 aa9.48□□□□□ -0.89
CACNA1C-213ENST00000399629 ZNF493Q6ZR52 646 aa9.48□□□□□ -0.89
CACNA1C-213ENST00000399629 C9JAW5 83 aa9.48□□□□□ -0.89
CACNA1C-213ENST00000399629 FAM104BQ5XKR9 115 aa9.47□□□□□ -0.89
CACNA1C-213ENST00000399629 SHISA2Q6UWI4 295 aa9.47□□□□□ -0.89
CACNA1C-213ENST00000399629 Q6ZRM9 215 aa9.47□□□□□ -0.89
CACNA1C-213ENST00000399629 PLXNA4Q9HCM2 1894 aa9.47□□□□□ -0.89
CACNA1C-213ENST00000399629 SYS1-DBNDD2H3BUS1 97 aa9.47□□□□□ -0.89
CACNA1C-213ENST00000399629 CFPP27918 469 aa9.47□□□□□ -0.89
CACNA1C-213ENST00000399629 C14orf177Q52M58 125 aa9.47□□□□□ -0.89
CACNA1C-213ENST00000399629 WT1-ASQ06250 92 aa9.47□□□□□ -0.89
CACNA1C-213ENST00000399629 MRPL51Q4U2R6 128 aaKnown RBP9.47□□□□□ -0.89
CACNA1C-213ENST00000399629 IGKV1-6A0A0C4DH72 117 aa9.47□□□□□ -0.89
CACNA1C-213ENST00000399629 C9orf47Q6ZRZ4 202 aa9.47□□□□□ -0.89
CACNA1C-213ENST00000399629 ADAMTSL5Q6ZMM2 481 aa9.47□□□□□ -0.89
CACNA1C-213ENST00000399629 C5orf38Q86SI9 138 aa9.47□□□□□ -0.89
CACNA1C-213ENST00000399629 C8orf31Q8N9H6 132 aa9.47□□□□□ -0.89
CACNA1C-213ENST00000399629 IGHG4P01861 327 aa9.47□□□□□ -0.89
CACNA1C-213ENST00000399629 NAA38Q9BRA0 125 aaKnown RBP9.47□□□□□ -0.89
CACNA1C-213ENST00000399629 C5orf47Q569G3 176 aa9.46□□□□□ -0.89
CACNA1C-213ENST00000399629 ZNF843Q8N446 348 aa9.46□□□□□ -0.89
CACNA1C-213ENST00000399629 C5orf56Q8N8D9 126 aa9.46□□□□□ -0.9
CACNA1C-213ENST00000399629 CHKB-CPT1BH3BT56 60 aa9.46□□□□□ -0.9
CACNA1C-213ENST00000399629 BOD1L2Q8IYS8 172 aa9.46□□□□□ -0.9
CACNA1C-213ENST00000399629 A0A087X0K7 114 aa9.46□□□□□ -0.9
CACNA1C-213ENST00000399629 LRCOL1A6NCL2 159 aa9.46□□□□□ -0.9
CACNA1C-213ENST00000399629 SLC25A29Q8N8R3 303 aa9.46□□□□□ -0.9
CACNA1C-213ENST00000399629 ZC2HC1AQ96GY0 325 aa9.46□□□□□ -0.9
CACNA1C-213ENST00000399629 TSC2P49815 1807 aa9.45□□□□□ -0.9
CACNA1C-213ENST00000399629 NPBQ8NG41 125 aa9.45□□□□□ -0.9
CACNA1C-213ENST00000399629 GTSF1Q8WW33 167 aa9.45□□□□□ -0.9
CACNA1C-213ENST00000399629 PLXND1Q9Y4D7 1925 aa9.45□□□□□ -0.9
CACNA1C-213ENST00000399629 C2orf70A6NJV1 201 aa9.45□□□□□ -0.9
CACNA1C-213ENST00000399629 ZFAND6Q6FIF0 208 aa9.45□□□□□ -0.9
CACNA1C-213ENST00000399629 NDUFAF3Q9BU61 184 aa9.45□□□□□ -0.9
CACNA1C-213ENST00000399629 IGLC1P0CG04 106 aa9.45□□□□□ -0.9
CACNA1C-213ENST00000399629 HLA-DMBP28068 263 aa9.45□□□□□ -0.9
CACNA1C-213ENST00000399629 DAZ2Q13117 558 aaKnown RBP9.45□□□□□ -0.9
CACNA1C-213ENST00000399629 DAZ4Q86SG3 579 aaKnown RBP9.45□□□□□ -0.9
CACNA1C-213ENST00000399629 DAZ3Q9NR90 486 aaKnown RBP9.45□□□□□ -0.9
CACNA1C-213ENST00000399629 CT83Q5H943 113 aa9.45□□□□□ -0.9
CACNA1C-213ENST00000399629 NDUFB1O75438 58 aa9.45□□□□□ -0.9
CACNA1C-213ENST00000399629 LOXL1Q08397 574 aaPredicted RBP9.44□□□□□ -0.9
CACNA1C-213ENST00000399629 TRAV12-1A0A0B4J245 112 aa9.44□□□□□ -0.9
CACNA1C-213ENST00000399629 ETV2O00321 342 aaPredicted RBP9.44□□□□□ -0.9
CACNA1C-213ENST00000399629 CXCL1P09341 107 aa9.44□□□□□ -0.9
CACNA1C-213ENST00000399629 HIST1H2BKO60814 126 aa9.44□□□□□ -0.9
CACNA1C-213ENST00000399629 HIST1H2BJP06899 126 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms