RNA–Protein interactions for RNA: ENST00000399455.2

USP47-203, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene USP47, Length 7,396 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-203ENST00000399455 DAZ3Q9NR90 486 aaKnown RBP6.23□□□□□ -1.41
USP47-203ENST00000399455 TRAV8-1A0A0A6YYK1 113 aa6.23□□□□□ -1.41
USP47-203ENST00000399455 GSN-AS1Q9NRJ2 163 aa6.23□□□□□ -1.41
USP47-203ENST00000399455 POU2AF1Q16633 256 aa6.23□□□□□ -1.41
USP47-203ENST00000399455 MLANAQ16655 118 aa6.23□□□□□ -1.41
USP47-203ENST00000399455 NUP35Q8NFH5 326 aa6.23□□□□□ -1.41
USP47-203ENST00000399455 CARHSP1Q9Y2V2 147 aaKnown RBP6.23□□□□□ -1.41
USP47-203ENST00000399455 C11orf53Q8IXP5 236 aa6.23□□□□□ -1.41
USP47-203ENST00000399455 IGKV1-6A0A0C4DH72 117 aa6.23□□□□□ -1.41
USP47-203ENST00000399455 Q0VG73 95 aa6.23□□□□□ -1.41
USP47-203ENST00000399455 IFITM3Q01628 133 aa6.22□□□□□ -1.41
USP47-203ENST00000399455 ARTNQ5T4W7 220 aa6.22□□□□□ -1.41
USP47-203ENST00000399455 Q8N9W7 124 aa6.22□□□□□ -1.41
USP47-203ENST00000399455 TP53TG1Q9Y2A0 90 aa6.22□□□□□ -1.41
USP47-203ENST00000399455 IGHV3-38A0A0C4DH36 116 aa6.22□□□□□ -1.41
USP47-203ENST00000399455 IGLC1P0CG04 106 aa6.22□□□□□ -1.41
USP47-203ENST00000399455 WT1-ASQ06250 92 aa6.22□□□□□ -1.41
USP47-203ENST00000399455 RBMY1FQ15415 496 aaKnown RBP6.22□□□□□ -1.41
USP47-203ENST00000399455 IGHV3-30P01768 117 aa6.22□□□□□ -1.41
USP47-203ENST00000399455 IGHV3-33P01772 117 aa6.22□□□□□ -1.41
USP47-203ENST00000399455 IGHV3-30-3P0DP02 117 aa6.22□□□□□ -1.41
USP47-203ENST00000399455 IGHV3-30-5P0DP03 117 aa6.22□□□□□ -1.41
USP47-203ENST00000399455 TMEM170AQ8WVE7 144 aa6.22□□□□□ -1.41
USP47-203ENST00000399455 VWC2LB2RUY7 222 aa6.22□□□□□ -1.41
USP47-203ENST00000399455 TAL2Q16559 108 aa6.22□□□□□ -1.41
USP47-203ENST00000399455 CT83Q5H943 113 aa6.22□□□□□ -1.41
USP47-203ENST00000399455 MEGF9Q9H1U4 602 aa6.22□□□□□ -1.41
USP47-203ENST00000399455 FAM231BA6NCW3 169 aa6.22□□□□□ -1.41
USP47-203ENST00000399455 BUB3O43684 328 aa6.22□□□□□ -1.41
USP47-203ENST00000399455 CLPSL2Q6UWE3 100 aa6.22□□□□□ -1.41
USP47-203ENST00000399455 NEGR1Q7Z3B1 354 aa6.22□□□□□ -1.41
USP47-203ENST00000399455 PRR25Q96S07 402 aa6.22□□□□□ -1.41
USP47-203ENST00000399455 NUP210LQ5VU65 1888 aa6.22□□□□□ -1.41
USP47-203ENST00000399455 SPRNQ5BIV9 151 aa6.22□□□□□ -1.41
USP47-203ENST00000399455 C16orf54Q6UWD8 224 aa6.22□□□□□ -1.41
USP47-203ENST00000399455 ASXL3Q9C0F0 2248 aa6.21□□□□□ -1.41
USP47-203ENST00000399455 IGLV3-1P01715 115 aa6.21□□□□□ -1.41
USP47-203ENST00000399455 Q5BKY6 102 aa6.21□□□□□ -1.41
USP47-203ENST00000399455 FANCD2OSQ96PS1 177 aa6.21□□□□□ -1.41
USP47-203ENST00000399455 HHLA3Q9XRX5 114 aa6.21□□□□□ -1.41
USP47-203ENST00000399455 FAM19A2Q8N3H0 131 aa6.21□□□□□ -1.42
USP47-203ENST00000399455 APC2O95996 2303 aa6.21□□□□□ -1.42
USP47-203ENST00000399455 BTCP35070 178 aa6.21□□□□□ -1.42
USP47-203ENST00000399455 COX11Q9Y6N1 276 aa6.21□□□□□ -1.42
USP47-203ENST00000399455 AHCTF1Q8WYP5 2266 aa6.21□□□□□ -1.42
USP47-203ENST00000399455 SMIM9A6NGZ8 99 aa6.21□□□□□ -1.42
USP47-203ENST00000399455 DEFB104AQ8WTQ1 72 aa6.21□□□□□ -1.42
USP47-203ENST00000399455 SMIM2Q9BVW6 85 aa6.21□□□□□ -1.42
USP47-203ENST00000399455 Q8N8P6 123 aa6.21□□□□□ -1.42
USP47-203ENST00000399455 FSTL3O95633 263 aa6.2□□□□□ -1.42
USP47-203ENST00000399455 HIST2H2BCQ6DN03 193 aa6.2□□□□□ -1.42
USP47-203ENST00000399455 SDHAF1A6NFY7 115 aa6.2□□□□□ -1.42
USP47-203ENST00000399455 IGLL1P15814 213 aa6.2□□□□□ -1.42
USP47-203ENST00000399455 ZC2HC1AQ96GY0 325 aa6.2□□□□□ -1.42
USP47-203ENST00000399455 IGLV11-55A0A075B6I3 123 aa6.2□□□□□ -1.42
USP47-203ENST00000399455 IGLC7A0M8Q6 106 aa6.2□□□□□ -1.42
USP47-203ENST00000399455 NFE4Q86UQ8 179 aa6.2□□□□□ -1.42
USP47-203ENST00000399455 LRRK1Q38SD2 2015 aa6.2□□□□□ -1.42
USP47-203ENST00000399455 CAMK2N2Q96S95 79 aa6.2□□□□□ -1.42
USP47-203ENST00000399455 K7ERU9 68 aa6.2□□□□□ -1.42
USP47-203ENST00000399455 Q8N7P7 452 aa6.2□□□□□ -1.42
USP47-203ENST00000399455 UBE2AP49459 152 aa6.2□□□□□ -1.42
USP47-203ENST00000399455 DNAJC13O75165 2243 aa6.2□□□□□ -1.42
USP47-203ENST00000399455 A0A0G2JRQ6 117 aa6.19□□□□□ -1.42
USP47-203ENST00000399455 SERF1AO75920 110 aa6.19□□□□□ -1.42
USP47-203ENST00000399455 XCL1P47992 114 aa6.19□□□□□ -1.42
USP47-203ENST00000399455 H0YIZ8 118 aa6.19□□□□□ -1.42
USP47-203ENST00000399455 PFN2P35080 140 aa6.19□□□□□ -1.42
USP47-203ENST00000399455 AMN1Q8IY45 258 aa6.19□□□□□ -1.42
USP47-203ENST00000399455 LYL1P12980 280 aa6.19□□□□□ -1.42
USP47-203ENST00000399455 INTS1Q8N201 2190 aaKnown RBP6.19□□□□□ -1.42
USP47-203ENST00000399455 LYRM9A8MSI8 78 aa6.19□□□□□ -1.42
USP47-203ENST00000399455 ORAOV1Q8WV07 137 aa6.18□□□□□ -1.42
USP47-203ENST00000399455 TRAV8-4A0A0B4J246 113 aa6.18□□□□□ -1.42
USP47-203ENST00000399455 INAFM2P0DMQ5 153 aa6.18□□□□□ -1.42
USP47-203ENST00000399455 LMO4P61968 165 aa6.18□□□□□ -1.42
USP47-203ENST00000399455 TMEM263Q8WUH6 116 aaKnown RBP6.18□□□□□ -1.42
USP47-203ENST00000399455 C20orf78Q9BR46 151 aa6.18□□□□□ -1.42
USP47-203ENST00000399455 TECTAO75443 2155 aa6.18□□□□□ -1.42
USP47-203ENST00000399455 SMKR1H3BMG3 65 aa6.18□□□□□ -1.42
USP47-203ENST00000399455 COX7A2LO14548 114 aa6.18□□□□□ -1.42
USP47-203ENST00000399455 CD300CQ08708 224 aa6.18□□□□□ -1.42
USP47-203ENST00000399455 ETDCA0A1B0GVM5 59 aa6.18□□□□□ -1.42
USP47-203ENST00000399455 LGALS9O00182 355 aa6.18□□□□□ -1.42
USP47-203ENST00000399455 ADAMTSL5Q6ZMM2 481 aa6.18□□□□□ -1.42
USP47-203ENST00000399455 DEFB125Q8N687 156 aa6.18□□□□□ -1.42
USP47-203ENST00000399455 C5orf30Q96GV9 206 aa6.18□□□□□ -1.42
USP47-203ENST00000399455 CACNA1EQ15878 2313 aa6.18□□□□□ -1.42
USP47-203ENST00000399455 SNAI2O43623 268 aa6.18□□□□□ -1.42
USP47-203ENST00000399455 hDV102S1A0JD36 115 aa6.18□□□□□ -1.42
USP47-203ENST00000399455 PHF3Q92576 2039 aaKnown RBP6.18□□□□□ -1.42
USP47-203ENST00000399455 DOCK9Q9BZ29 2069 aa6.18□□□□□ -1.42
USP47-203ENST00000399455 RSPO1Q2MKA7 263 aaPredicted RBP6.17□□□□□ -1.42
USP47-203ENST00000399455 Q6ZRM9 215 aa6.17□□□□□ -1.42
USP47-203ENST00000399455 LINC01551Q86U37 167 aa6.17□□□□□ -1.42
USP47-203ENST00000399455 TRAV10A0A0B4J240 114 aa6.17□□□□□ -1.42
USP47-203ENST00000399455 A0A1B0GWB2 263 aa6.17□□□□□ -1.42
USP47-203ENST00000399455 IGHG4P01861 327 aa6.17□□□□□ -1.42
USP47-203ENST00000399455 HSD52Q0P140 79 aa6.17□□□□□ -1.42
USP47-203ENST00000399455 SCRT2Q9NQ03 307 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms