RNA–Protein interactions for RNA: ENST00000397901.7

CHMP1A-201, Transcript of charged multivesicular body protein 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP1A, Length 2,483 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-201ENST00000397901 GTSCR1Q86UQ5 136 aa12.45□□□□□ -0.42
CHMP1A-201ENST00000397901 LYPD1Q8N2G4 141 aa12.45□□□□□ -0.42
CHMP1A-201ENST00000397901 IGKV2-40A0A087WW87 121 aaPredicted RBP12.45□□□□□ -0.42
CHMP1A-201ENST00000397901 IGKV2D-40P01614 121 aaPredicted RBP12.45□□□□□ -0.42
CHMP1A-201ENST00000397901 PPIFP30405 207 aaKnown RBP12.45□□□□□ -0.42
CHMP1A-201ENST00000397901 LINC01559Q495D7 138 aa12.45□□□□□ -0.42
CHMP1A-201ENST00000397901 CFAP126Q5VTH2 177 aa12.45□□□□□ -0.42
CHMP1A-201ENST00000397901 VKORC1Q9BQB6 163 aa12.45□□□□□ -0.42
CHMP1A-201ENST00000397901 VCX2Q9H322 139 aa12.45□□□□□ -0.42
CHMP1A-201ENST00000397901 AAMDCQ9H7C9 122 aa12.45□□□□□ -0.42
CHMP1A-201ENST00000397901 LRBAP50851 2863 aa12.44□□□□□ -0.42
CHMP1A-201ENST00000397901 ARHGAP32A7KAX9 2087 aa12.44□□□□□ -0.42
CHMP1A-201ENST00000397901 SMKR1H3BMG3 65 aa12.44□□□□□ -0.42
CHMP1A-201ENST00000397901 LY6LH3BQJ8 138 aa12.44□□□□□ -0.42
CHMP1A-201ENST00000397901 DPM2O94777 84 aa12.44□□□□□ -0.42
CHMP1A-201ENST00000397901 FHL3Q13643 280 aa12.44□□□□□ -0.42
CHMP1A-201ENST00000397901 SHISA2Q6UWI4 295 aa12.44□□□□□ -0.42
CHMP1A-201ENST00000397901 NPYP01303 97 aa12.43□□□□□ -0.42
CHMP1A-201ENST00000397901 IGHV3-23P01764 117 aa12.43□□□□□ -0.42
CHMP1A-201ENST00000397901 PRSS1P07477 247 aa12.43□□□□□ -0.42
CHMP1A-201ENST00000397901 CKS2P33552 79 aa12.43□□□□□ -0.42
CHMP1A-201ENST00000397901 ZC2HC1BQ5TFG8 222 aa12.43□□□□□ -0.42
CHMP1A-201ENST00000397901 TMEM190Q8WZ59 177 aa12.43□□□□□ -0.42
CHMP1A-201ENST00000397901 HIST1H4GQ99525 98 aa12.43□□□□□ -0.42
CHMP1A-201ENST00000397901 DCHS2Q6V1P9 2916 aa12.43□□□□□ -0.42
CHMP1A-201ENST00000397901 NBR2O15453 112 aa12.43□□□□□ -0.42
CHMP1A-201ENST00000397901 NFE4Q86UQ8 179 aa12.43□□□□□ -0.42
CHMP1A-201ENST00000397901 Q8TAT8 98 aa12.43□□□□□ -0.42
CHMP1A-201ENST00000397901 FAM110AQ9BQ89 295 aa12.43□□□□□ -0.42
CHMP1A-201ENST00000397901 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.42□□□□□ -0.42
CHMP1A-201ENST00000397901 B9A039 149 aa12.42□□□□□ -0.42
CHMP1A-201ENST00000397901 HES1Q14469 280 aa12.42□□□□□ -0.42
CHMP1A-201ENST00000397901 TWIST1Q15672 202 aa12.42□□□□□ -0.42
CHMP1A-201ENST00000397901 IGFL4Q6B9Z1 124 aa12.42□□□□□ -0.42
CHMP1A-201ENST00000397901 SRSF8Q9BRL6 282 aaKnown RBP12.42□□□□□ -0.42
CHMP1A-201ENST00000397901 ABCA4P78363 2273 aa12.42□□□□□ -0.42
CHMP1A-201ENST00000397901 ATP5LO75964 103 aa12.42□□□□□ -0.42
CHMP1A-201ENST00000397901 FCER1GP30273 86 aa12.42□□□□□ -0.42
CHMP1A-201ENST00000397901 SMCPP49901 116 aaPredicted RBP12.42□□□□□ -0.42
CHMP1A-201ENST00000397901 ZFAND6Q6FIF0 208 aa12.42□□□□□ -0.42
CHMP1A-201ENST00000397901 DLX4Q92988 240 aaPredicted RBP12.42□□□□□ -0.42
CHMP1A-201ENST00000397901 RNF5Q99942 180 aa12.42□□□□□ -0.42
CHMP1A-201ENST00000397901 TRBV7-9A0A0J9YWB2 115 aa12.41□□□□□ -0.42
CHMP1A-201ENST00000397901 LINC01546A6NGU7 62 aa12.41□□□□□ -0.42
CHMP1A-201ENST00000397901 B5MCH6 92 aa12.41□□□□□ -0.42
CHMP1A-201ENST00000397901 CD3EP07766 207 aa12.41□□□□□ -0.42
CHMP1A-201ENST00000397901 GLMPQ8WWB7 406 aa12.41□□□□□ -0.42
CHMP1A-201ENST00000397901 TMEM158Q8WZ71 300 aa12.41□□□□□ -0.42
CHMP1A-201ENST00000397901 LY6HO94772 140 aa12.4□□□□□ -0.42
CHMP1A-201ENST00000397901 MAPKAPK5-AS1Q8N8E1 139 aa12.4□□□□□ -0.42
CHMP1A-201ENST00000397901 PPDPFLQ8WWR9 84 aa12.4□□□□□ -0.42
CHMP1A-201ENST00000397901 UFC1Q9Y3C8 167 aa12.4□□□□□ -0.42
CHMP1A-201ENST00000397901 EGR2P11161 476 aaPredicted RBP12.4□□□□□ -0.42
CHMP1A-201ENST00000397901 LEPP41159 167 aa12.4□□□□□ -0.42
CHMP1A-201ENST00000397901 LINC01560Q8TB33 94 aa12.4□□□□□ -0.42
CHMP1A-201ENST00000397901 FOXC2Q99958 501 aa12.4□□□□□ -0.42
CHMP1A-201ENST00000397901 RAB1BQ9H0U4 201 aa12.4□□□□□ -0.42
CHMP1A-201ENST00000397901 MAP1LC3AQ9H492 121 aa12.4□□□□□ -0.42
CHMP1A-201ENST00000397901 TRBV7-3A0A075B6L6 115 aa12.39□□□□□ -0.43
CHMP1A-201ENST00000397901 IGHV3OR16-8A0A075B7F1 116 aa12.39□□□□□ -0.43
CHMP1A-201ENST00000397901 TMEM8BA6NDV4 472 aa12.39□□□□□ -0.43
CHMP1A-201ENST00000397901 PRSS29PA6NIE9 313 aa12.39□□□□□ -0.43
CHMP1A-201ENST00000397901 LINC01619G3V211 115 aa12.39□□□□□ -0.43
CHMP1A-201ENST00000397901 PDE6HQ13956 83 aa12.39□□□□□ -0.43
CHMP1A-201ENST00000397901 FANCD2OSQ96PS1 177 aa12.39□□□□□ -0.43
CHMP1A-201ENST00000397901 HLA-DMBP28068 263 aa12.39□□□□□ -0.43
CHMP1A-201ENST00000397901 ZNF80P51504 273 aaPredicted RBP12.39□□□□□ -0.43
CHMP1A-201ENST00000397901 MFAP4P55083 255 aa12.39□□□□□ -0.43
CHMP1A-201ENST00000397901 TEX29Q8N6K0 151 aa12.39□□□□□ -0.43
CHMP1A-201ENST00000397901 DPM3Q9P2X0 92 aa12.39□□□□□ -0.43
CHMP1A-201ENST00000397901 F8W735 103 aaPredicted RBP12.38□□□□□ -0.43
CHMP1A-201ENST00000397901 HOXA3O43365 443 aaPredicted RBP12.38□□□□□ -0.43
CHMP1A-201ENST00000397901 MORN3Q6PF18 240 aaPredicted RBP12.38□□□□□ -0.43
CHMP1A-201ENST00000397901 CFHR4Q92496 578 aa12.38□□□□□ -0.43
CHMP1A-201ENST00000397901 PRR25Q96S07 402 aa12.38□□□□□ -0.43
CHMP1A-201ENST00000397901 HERV-K104P63124 156 aa12.38□□□□□ -0.43
CHMP1A-201ENST00000397901 RAXQ9Y2V3 346 aa12.38□□□□□ -0.43
CHMP1A-201ENST00000397901 IGF2RP11717 2491 aa12.37□□□□□ -0.43
CHMP1A-201ENST00000397901 IGLV11-55A0A075B6I3 123 aa12.37□□□□□ -0.43
CHMP1A-201ENST00000397901 IGHV3-35A0A0C4DH35 117 aa12.37□□□□□ -0.43
CHMP1A-201ENST00000397901 NDPQ00604 133 aa12.37□□□□□ -0.43
CHMP1A-201ENST00000397901 ZNF672Q499Z4 452 aaPredicted RBP12.37□□□□□ -0.43
CHMP1A-201ENST00000397901 TMEM160Q9NX00 188 aa12.37□□□□□ -0.43
CHMP1A-201ENST00000397901 UCNP55089 124 aa12.37□□□□□ -0.43
CHMP1A-201ENST00000397901 NXT2Q9NPJ8 142 aaKnown RBP12.37□□□□□ -0.43
CHMP1A-201ENST00000397901 C21orf62Q9NYP8 219 aa12.37□□□□□ -0.43
CHMP1A-201ENST00000397901 MSRB1Q9NZV6 116 aa12.37□□□□□ -0.43
CHMP1A-201ENST00000397901 RELNP78509 3460 aa12.37□□□□□ -0.43
CHMP1A-201ENST00000397901 ANKHD1Q8IWZ3 2542 aaKnown RBP12.36□□□□□ -0.43
CHMP1A-201ENST00000397901 NCBP2LA6PVI3 153 aaKnown RBP12.36□□□□□ -0.43
CHMP1A-201ENST00000397901 TEN1Q86WV5 123 aa12.36□□□□□ -0.43
CHMP1A-201ENST00000397901 CARD19Q96LW7 228 aa12.36□□□□□ -0.43
CHMP1A-201ENST00000397901 WNK2Q9Y3S1 2297 aa12.36□□□□□ -0.43
CHMP1A-201ENST00000397901 TRAV40A0A0B4J280 105 aa12.36□□□□□ -0.43
CHMP1A-201ENST00000397901 NDUFA3O95167 84 aa12.36□□□□□ -0.43
CHMP1A-201ENST00000397901 GAS8-AS1O95177 125 aa12.36□□□□□ -0.43
CHMP1A-201ENST00000397901 FBXL19-AS1Q494R0 122 aa12.36□□□□□ -0.43
CHMP1A-201ENST00000397901 TMEM262E9PQX1 116 aa12.35□□□□□ -0.43
CHMP1A-201ENST00000397901 RPL7P18124 248 aaKnown RBP12.35□□□□□ -0.43
CHMP1A-201ENST00000397901 NPBQ8NG41 125 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms