RNA–Protein interactions for RNA: ENST00000396410.8

PDXDC1-202, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDXDC1, Length 4,521 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-202ENST00000396410 UNQ9165/PRO28630Q6UXU0 137 aa8.89□□□□□ -0.99
PDXDC1-202ENST00000396410 MRPL53Q96EL3 112 aaKnown RBP8.89□□□□□ -0.99
PDXDC1-202ENST00000396410 LINC00477Q96M19 166 aa8.89□□□□□ -0.99
PDXDC1-202ENST00000396410 KLK15Q9H2R5 256 aa8.89□□□□□ -0.99
PDXDC1-202ENST00000396410 BSNQ9UPA5 3926 aa8.89□□□□□ -0.99
PDXDC1-202ENST00000396410 SNAI2O43623 268 aa8.88□□□□□ -0.99
PDXDC1-202ENST00000396410 IGHG2P01859 326 aa8.88□□□□□ -0.99
PDXDC1-202ENST00000396410 CTRLP40313 264 aa8.88□□□□□ -0.99
PDXDC1-202ENST00000396410 AP1S3Q96PC3 154 aa8.88□□□□□ -0.99
PDXDC1-202ENST00000396410 H3BUA1 57 aa8.88□□□□□ -0.99
PDXDC1-202ENST00000396410 ASIPP42127 132 aa8.88□□□□□ -0.99
PDXDC1-202ENST00000396410 DAZ1Q9NQZ3 744 aaKnown RBP8.88□□□□□ -0.99
PDXDC1-202ENST00000396410 FOXE3Q13461 319 aa8.88□□□□□ -0.99
PDXDC1-202ENST00000396410 LINC01559Q495D7 138 aa8.88□□□□□ -0.99
PDXDC1-202ENST00000396410 IFI27L1Q96BM0 104 aa8.88□□□□□ -0.99
PDXDC1-202ENST00000396410 A6NDX4 124 aa8.88□□□□□ -0.99
PDXDC1-202ENST00000396410 DMRTA1Q5VZB9 504 aa8.88□□□□□ -0.99
PDXDC1-202ENST00000396410 ZNF747Q9BV97 191 aa8.88□□□□□ -0.99
PDXDC1-202ENST00000396410 NXT2Q9NPJ8 142 aaKnown RBP8.88□□□□□ -0.99
PDXDC1-202ENST00000396410 PEF1Q9UBV8 284 aaKnown RBP8.88□□□□□ -0.99
PDXDC1-202ENST00000396410 TNFRSF6BO95407 300 aa8.87□□□□□ -0.99
PDXDC1-202ENST00000396410 NMUP48645 174 aa8.87□□□□□ -0.99
PDXDC1-202ENST00000396410 MYOZ3Q8TDC0 251 aa8.87□□□□□ -0.99
PDXDC1-202ENST00000396410 ATP6V0BQ99437 205 aa8.87□□□□□ -0.99
PDXDC1-202ENST00000396410 PKD1L2Q7Z442 2459 aa8.87□□□□□ -0.99
PDXDC1-202ENST00000396410 SMAD7O15105 426 aaKnown RBP8.87□□□□□ -0.99
PDXDC1-202ENST00000396410 NUDT3O95989 172 aa8.87□□□□□ -0.99
PDXDC1-202ENST00000396410 TMEM95Q3KNT9 176 aa8.87□□□□□ -0.99
PDXDC1-202ENST00000396410 MRPS16Q9Y3D3 137 aaKnown RBP8.87□□□□□ -0.99
PDXDC1-202ENST00000396410 FAM208BQ5VWN6 2430 aa8.87□□□□□ -0.99
PDXDC1-202ENST00000396410 IGF1P05019 195 aa8.87□□□□□ -0.99
PDXDC1-202ENST00000396410 RELNP78509 3460 aa8.87□□□□□ -0.99
PDXDC1-202ENST00000396410 CACNA1AO00555 2505 aa8.87□□□□□ -0.99
PDXDC1-202ENST00000396410 IGHV4-59P01825 116 aa8.86□□□□□ -0.99
PDXDC1-202ENST00000396410 IGLC6P0CF74 106 aa8.86□□□□□ -0.99
PDXDC1-202ENST00000396410 VAMP3Q15836 100 aa8.86□□□□□ -0.99
PDXDC1-202ENST00000396410 SPOCK3Q9BQ16 436 aa8.86□□□□□ -0.99
PDXDC1-202ENST00000396410 MS4A6AQ9H2W1 248 aa8.86□□□□□ -0.99
PDXDC1-202ENST00000396410 DEFB112Q30KQ8 113 aa8.86□□□□□ -0.99
PDXDC1-202ENST00000396410 C12orf54Q6X4T0 127 aa8.86□□□□□ -0.99
PDXDC1-202ENST00000396410 TACC2O95359 2948 aa8.86□□□□□ -0.99
PDXDC1-202ENST00000396410 TRAV8-2A0A0B4J237 113 aa8.86□□□□□ -0.99
PDXDC1-202ENST00000396410 IGKV3-20P01619 116 aa8.86□□□□□ -0.99
PDXDC1-202ENST00000396410 PIFOQ8TCI5 191 aa8.86□□□□□ -0.99
PDXDC1-202ENST00000396410 WFDC12Q8WWY7 111 aa8.86□□□□□ -0.99
PDXDC1-202ENST00000396410 ACACBO00763 2458 aa8.86□□□□□ -0.99
PDXDC1-202ENST00000396410 RNF223E7ERA6 249 aa8.86□□□□□ -0.99
PDXDC1-202ENST00000396410 F5H697 171 aa8.86□□□□□ -0.99
PDXDC1-202ENST00000396410 IGHG4P01861 327 aa8.86□□□□□ -0.99
PDXDC1-202ENST00000396410 C9orf47Q6ZRZ4 202 aa8.86□□□□□ -0.99
PDXDC1-202ENST00000396410 SRSF2Q01130 221 aaKnown RBP8.85□□□□□ -0.99
PDXDC1-202ENST00000396410 FAM159AQ6UWV7 190 aa8.85□□□□□ -0.99
PDXDC1-202ENST00000396410 SPATA12Q7Z6I5 190 aa8.85□□□□□ -0.99
PDXDC1-202ENST00000396410 IGHV7-4-1A0A0J9YVY3 117 aa8.85□□□□□ -0.99
PDXDC1-202ENST00000396410 LOXL1Q08397 574 aaPredicted RBP8.85□□□□□ -0.99
PDXDC1-202ENST00000396410 F6UB75 175 aa8.85□□□□□ -0.99
PDXDC1-202ENST00000396410 IGKV3D-20A0A0C4DH25 116 aa8.84□□□□□ -0.99
PDXDC1-202ENST00000396410 CBY3A6NI87 242 aa8.84□□□□□ -0.99
PDXDC1-202ENST00000396410 PTTG1IPP53801 180 aa8.84□□□□□ -0.99
PDXDC1-202ENST00000396410 DEFB1P60022 68 aa8.84□□□□□ -0.99
PDXDC1-202ENST00000396410 SNRPD3P62318 126 aaKnown RBP8.84□□□□□ -0.99
PDXDC1-202ENST00000396410 STPG4Q8N801 248 aa8.84□□□□□ -0.99
PDXDC1-202ENST00000396410 GATD1Q8NB37 220 aa8.84□□□□□ -0.99
PDXDC1-202ENST00000396410 OR2K2Q8NGT1 345 aa8.84□□□□□ -0.99
PDXDC1-202ENST00000396410 TMEM208Q9BTX3 173 aa8.84□□□□□ -0.99
PDXDC1-202ENST00000396410 TRAV26-2A0A0B4J265 109 aa8.84□□□□□ -0.99
PDXDC1-202ENST00000396410 GATA1P15976 413 aaPredicted RBP8.84□□□□□ -0.99
PDXDC1-202ENST00000396410 MPV17L2Q567V2 206 aa8.84□□□□□ -0.99
PDXDC1-202ENST00000396410 FOXC2Q99958 501 aa8.84□□□□□ -0.99
PDXDC1-202ENST00000396410 CSPG4Q6UVK1 2322 aa8.84□□□□□ -1
PDXDC1-202ENST00000396410 C7orf71A4D174 169 aa8.83□□□□□ -1
PDXDC1-202ENST00000396410 CRXO43186 299 aaPredicted RBP8.83□□□□□ -1
PDXDC1-202ENST00000396410 Q6ZS46 218 aa8.83□□□□□ -1
PDXDC1-202ENST00000396410 COX8CQ7Z4L0 72 aa8.83□□□□□ -1
PDXDC1-202ENST00000396410 LINC01545Q5VT33 79 aa8.83□□□□□ -1
PDXDC1-202ENST00000396410 DLEU1O43261 78 aa8.83□□□□□ -1
PDXDC1-202ENST00000396410 TMEM158Q8WZ71 300 aa8.83□□□□□ -1
PDXDC1-202ENST00000396410 C20orf173Q96LM9 149 aa8.82□□□□□ -1
PDXDC1-202ENST00000396410 LENEPQ9Y5L5 61 aa8.82□□□□□ -1
PDXDC1-202ENST00000396410 PSMG4Q5JS54 123 aa8.82□□□□□ -1
PDXDC1-202ENST00000396410 SAMD13Q5VXD3 122 aa8.82□□□□□ -1
PDXDC1-202ENST00000396410 DPF1Q92782 380 aa8.82□□□□□ -1
PDXDC1-202ENST00000396410 SMPXQ9UHP9 88 aa8.82□□□□□ -1
PDXDC1-202ENST00000396410 U3KQE9 123 aa8.82□□□□□ -1
PDXDC1-202ENST00000396410 AVPP01185 164 aa8.82□□□□□ -1
PDXDC1-202ENST00000396410 ZNF688P0C7X2 276 aa8.82□□□□□ -1
PDXDC1-202ENST00000396410 FCER1GP30273 86 aa8.82□□□□□ -1
PDXDC1-202ENST00000396410 ANXA2RQ3ZCQ2 193 aa8.82□□□□□ -1
PDXDC1-202ENST00000396410 U3KQK5 164 aa8.82□□□□□ -1
PDXDC1-202ENST00000396410 C14orf178Q8N769 122 aaPredicted RBP8.82□□□□□ -1
PDXDC1-202ENST00000396410 J3QLI3 93 aa8.81□□□□□ -1
PDXDC1-202ENST00000396410 SPRY2O43597 315 aa8.81□□□□□ -1
PDXDC1-202ENST00000396410 ATP5LO75964 103 aa8.81□□□□□ -1
PDXDC1-202ENST00000396410 SRSF1Q07955 248 aaKnown RBP eCLIP8.81□□□□□ -16e-7■■■□□ 17.9
PDXDC1-202ENST00000396410 LAGE3Q14657 143 aa8.81□□□□□ -1
PDXDC1-202ENST00000396410 TMEM97Q5BJF2 176 aa8.81□□□□□ -1
PDXDC1-202ENST00000396410 CRIP2P52943 208 aaPredicted RBP8.81□□□□□ -1
PDXDC1-202ENST00000396410 LGALS9BQ3B8N2 356 aa8.81□□□□□ -1
PDXDC1-202ENST00000396410 LGALS9CQ6DKI2 356 aa8.81□□□□□ -1
PDXDC1-202ENST00000396410 DUX5Q96PT3 197 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 163.3 ms