RNA–Protein interactions for RNA: ENST00000395823.2

HMGB1P10-201, Transcript of high mobility group box 1 pseudogene 10, humanhuman

BASIC

Gene HMGB1P10, Length 563 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P10-201ENST00000395823 OR1I1O60431 355 aa2.58□□□□□ -2
HMGB1P10-201ENST00000395823 SNCGO76070 127 aa2.58□□□□□ -2
HMGB1P10-201ENST00000395823 LY6HO94772 140 aa2.58□□□□□ -2
HMGB1P10-201ENST00000395823 GYPBP06028 91 aa2.58□□□□□ -2
HMGB1P10-201ENST00000395823 COX6A1P12074 109 aa2.58□□□□□ -2
HMGB1P10-201ENST00000395823 CKS2P33552 79 aa2.58□□□□□ -2
HMGB1P10-201ENST00000395823 FUSP35637 526 aaKnown RBP eCLIP2.58□□□□□ -2
HMGB1P10-201ENST00000395823 BLCAPP62952 87 aa2.58□□□□□ -2
HMGB1P10-201ENST00000395823 DYNLT1P63172 113 aa2.58□□□□□ -2
HMGB1P10-201ENST00000395823 DCDP81605 110 aaKnown RBP2.58□□□□□ -2
HMGB1P10-201ENST00000395823 CIRBPQ14011 172 aaKnown RBP2.58□□□□□ -2
HMGB1P10-201ENST00000395823 LGALSLQ3ZCW2 172 aaPredicted RBP2.58□□□□□ -2
HMGB1P10-201ENST00000395823 CHCHD2P9Q5T1J5 151 aaPredicted RBP2.58□□□□□ -2
HMGB1P10-201ENST00000395823 C12orf73Q69YU5 71 aa2.58□□□□□ -2
HMGB1P10-201ENST00000395823 SOSTDC1Q6X4U4 206 aa2.58□□□□□ -2
HMGB1P10-201ENST00000395823 ATP11AUNQ6ZP68 121 aa2.58□□□□□ -2
HMGB1P10-201ENST00000395823 LINC00304Q8N9R0 145 aa2.58□□□□□ -2
HMGB1P10-201ENST00000395823 PFN4Q8NHR9 129 aa2.58□□□□□ -2
HMGB1P10-201ENST00000395823 UPK3BQ9BT76 320 aa2.58□□□□□ -2
HMGB1P10-201ENST00000395823 LSM2Q9Y333 95 aaKnown RBP2.58□□□□□ -2
HMGB1P10-201ENST00000395823 ARHGEF28Q8N1W1 1705 aaKnown RBP2.58□□□□□ -2
HMGB1P10-201ENST00000395823 TNS1Q9HBL0 1735 aaKnown RBP2.58□□□□□ -2
HMGB1P10-201ENST00000395823 PRR14LQ5THK1 2151 aa2.58□□□□□ -2
HMGB1P10-201ENST00000395823 LAMB4A4D0S4 1761 aa2.58□□□□□ -2
HMGB1P10-201ENST00000395823 CLIP1P30622 1438 aa2.58□□□□□ -2
HMGB1P10-201ENST00000395823 TULP4Q9NRJ4 1543 aa2.58□□□□□ -2
HMGB1P10-201ENST00000395823 CASZ1Q86V15 1759 aa2.57□□□□□ -2
HMGB1P10-201ENST00000395823 NUP210Q8TEM1 1887 aaPredicted RBP2.57□□□□□ -2
HMGB1P10-201ENST00000395823 F8W1H4 67 aa2.57□□□□□ -2
HMGB1P10-201ENST00000395823 M0R129 80 aa2.57□□□□□ -2
HMGB1P10-201ENST00000395823 EDF1O60869 148 aaKnown RBP2.57□□□□□ -2
HMGB1P10-201ENST00000395823 GYPAP02724 150 aa2.57□□□□□ -2
HMGB1P10-201ENST00000395823 CCL4P13236 92 aa2.57□□□□□ -2
HMGB1P10-201ENST00000395823 COL8A2P25067 703 aa2.57□□□□□ -2
HMGB1P10-201ENST00000395823 ASIPP42127 132 aa2.57□□□□□ -2
HMGB1P10-201ENST00000395823 RPL26P61254 145 aaKnown RBP2.57□□□□□ -2
HMGB1P10-201ENST00000395823 LYPD1Q8N2G4 141 aa2.57□□□□□ -2
HMGB1P10-201ENST00000395823 OR2T35Q8NGX2 323 aa2.57□□□□□ -2
HMGB1P10-201ENST00000395823 CHCHD1Q96BP2 118 aaKnown RBP2.57□□□□□ -2
HMGB1P10-201ENST00000395823 TTTY13Q9BZ97 58 aa2.57□□□□□ -2
HMGB1P10-201ENST00000395823 ASF1BQ9NVP2 202 aa2.57□□□□□ -2
HMGB1P10-201ENST00000395823 TIMM9Q9Y5J7 89 aa2.57□□□□□ -2
HMGB1P10-201ENST00000395823 ABCC1P33527 1531 aa2.57□□□□□ -2
HMGB1P10-201ENST00000395823 GLI3P10071 1580 aa2.57□□□□□ -2
HMGB1P10-201ENST00000395823 MKI67P46013 3256 aaKnown RBP2.57□□□□□ -2
HMGB1P10-201ENST00000395823 ITSN2Q9NZM3 1697 aa2.57□□□□□ -2
HMGB1P10-201ENST00000395823 ADAMTSL1Q8N6G6 1762 aa2.56□□□□□ -2
HMGB1P10-201ENST00000395823 PLXND1Q9Y4D7 1925 aa2.56□□□□□ -2
HMGB1P10-201ENST00000395823 A0A1W2PQD3 144 aa2.56□□□□□ -2
HMGB1P10-201ENST00000395823 TMEM235A6NFC5 223 aa2.56□□□□□ -2
HMGB1P10-201ENST00000395823 TIMM17BO60830 172 aa2.56□□□□□ -2
HMGB1P10-201ENST00000395823 IGKV1-17P01599 117 aa2.56□□□□□ -2
HMGB1P10-201ENST00000395823 CD3DP04234 171 aa2.56□□□□□ -2
HMGB1P10-201ENST00000395823 CCL5P13501 91 aa2.56□□□□□ -2
HMGB1P10-201ENST00000395823 XCL1P47992 114 aa2.56□□□□□ -2
HMGB1P10-201ENST00000395823 FXYD2P54710 66 aa2.56□□□□□ -2
HMGB1P10-201ENST00000395823 ATP5EP56381 51 aaPredicted RBP2.56□□□□□ -2
HMGB1P10-201ENST00000395823 KRTAP10-10P60014 251 aa2.56□□□□□ -2
HMGB1P10-201ENST00000395823 DEFB134Q4QY38 66 aa2.56□□□□□ -2
HMGB1P10-201ENST00000395823 PATE2Q6UY27 113 aa2.56□□□□□ -2
HMGB1P10-201ENST00000395823 Q6ZS92 163 aa2.56□□□□□ -2
HMGB1P10-201ENST00000395823 ZNF720Q7Z2F6 126 aa2.56□□□□□ -2
HMGB1P10-201ENST00000395823 ATP6V0E2Q8NHE4 81 aa2.56□□□□□ -2
HMGB1P10-201ENST00000395823 MRPS24Q96EL2 167 aaKnown RBP2.56□□□□□ -2
HMGB1P10-201ENST00000395823 HYLS1Q96M11 299 aa2.56□□□□□ -2
HMGB1P10-201ENST00000395823 TMEM242Q9NWH2 141 aa2.56□□□□□ -2
HMGB1P10-201ENST00000395823 ABCC5O15440 1437 aa2.56□□□□□ -2
HMGB1P10-201ENST00000395823 CPSF1Q10570 1443 aaKnown RBP2.56□□□□□ -2
HMGB1P10-201ENST00000395823 FYCO1Q9BQS8 1478 aa2.56□□□□□ -2
HMGB1P10-201ENST00000395823 DEPDC5O75140 1603 aa2.56□□□□□ -2
HMGB1P10-201ENST00000395823 MAST4O15021 2626 aa2.55□□□□□ -2
HMGB1P10-201ENST00000395823 IGKV1D-17A0A075B6S4 117 aa2.55□□□□□ -2
HMGB1P10-201ENST00000395823 MROH2AA6NES4 1674 aa2.55□□□□□ -2
HMGB1P10-201ENST00000395823 OOSP1A8MZH6 123 aa2.55□□□□□ -2
HMGB1P10-201ENST00000395823 C17orf112F2Z3M2 114 aa2.55□□□□□ -2
HMGB1P10-201ENST00000395823 PIK3C2AO00443 1686 aa2.55□□□□□ -2
HMGB1P10-201ENST00000395823 PITX3O75364 302 aa2.55□□□□□ -2
HMGB1P10-201ENST00000395823 PROSCO94903 275 aa2.55□□□□□ -2
HMGB1P10-201ENST00000395823 COL1A1P02452 1464 aaPredicted RBP2.55□□□□□ -2
HMGB1P10-201ENST00000395823 SHBGP04278 402 aa2.55□□□□□ -2
HMGB1P10-201ENST00000395823 PIPP12273 146 aaPredicted RBP2.55□□□□□ -2
HMGB1P10-201ENST00000395823 ZNF22P17026 224 aaPredicted RBP2.55□□□□□ -2
HMGB1P10-201ENST00000395823 PEBP1P30086 187 aaKnown RBP2.55□□□□□ -2
HMGB1P10-201ENST00000395823 AGLP35573 1532 aa2.55□□□□□ -2
HMGB1P10-201ENST00000395823 MYH11P35749 1972 aa2.55□□□□□ -2
HMGB1P10-201ENST00000395823 SNCAP37840 140 aa2.55□□□□□ -2
HMGB1P10-201ENST00000395823 POLR2JP52435 117 aaKnown RBP2.55□□□□□ -2
HMGB1P10-201ENST00000395823 Q0VG73 95 aa2.55□□□□□ -2
HMGB1P10-201ENST00000395823 TIAM1Q13009 1591 aa2.55□□□□□ -2
HMGB1P10-201ENST00000395823 KISS1Q15726 138 aa2.55□□□□□ -2
HMGB1P10-201ENST00000395823 RIC1Q4ADV7 1423 aa2.55□□□□□ -2
HMGB1P10-201ENST00000395823 FOCADQ5VW36 1801 aa2.55□□□□□ -2
HMGB1P10-201ENST00000395823 SDIM1Q6ZPB5 146 aa2.55□□□□□ -2
HMGB1P10-201ENST00000395823 DYNAPQ8N1N2 210 aa2.55□□□□□ -2
HMGB1P10-201ENST00000395823 Q8N2B8 174 aa2.55□□□□□ -2
HMGB1P10-201ENST00000395823 C3orf56Q8N813 242 aa2.55□□□□□ -2
HMGB1P10-201ENST00000395823 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP2.55□□□□□ -2
HMGB1P10-201ENST00000395823 TSKUQ8WUA8 353 aa2.55□□□□□ -2
HMGB1P10-201ENST00000395823 POP5Q969H6 163 aaKnown RBP2.55□□□□□ -2
HMGB1P10-201ENST00000395823 DOCK6Q96HP0 2047 aa2.55□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 101.6 ms