RNA–Protein interactions for RNA: ENST00000395601.7

SNTB1-201, Transcript of syntrophin beta 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SNTB1, Length 5,164 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNTB1-201ENST00000395601 IGHG4P01861 327 aa13.72□□□□□ -0.21
SNTB1-201ENST00000395601 HBDP02042 147 aa13.72□□□□□ -0.21
SNTB1-201ENST00000395601 AZU1P20160 251 aa13.72□□□□□ -0.21
SNTB1-201ENST00000395601 SERF1AO75920 110 aa13.72□□□□□ -0.21
SNTB1-201ENST00000395601 SPATA45Q537H7 98 aa13.72□□□□□ -0.21
SNTB1-201ENST00000395601 CFAP161Q6P656 301 aa13.72□□□□□ -0.21
SNTB1-201ENST00000395601 C16orf54Q6UWD8 224 aa13.72□□□□□ -0.21
SNTB1-201ENST00000395601 RHODO00212 210 aa13.71□□□□□ -0.21
SNTB1-201ENST00000395601 RASL11AQ6T310 242 aa13.71□□□□□ -0.21
SNTB1-201ENST00000395601 ZNF295-AS1Q8N0V1 137 aa13.71□□□□□ -0.21
SNTB1-201ENST00000395601 LYRM7Q5U5X0 104 aa13.71□□□□□ -0.22
SNTB1-201ENST00000395601 IGF1P05019 195 aa13.7□□□□□ -0.22
SNTB1-201ENST00000395601 GFRA4Q9GZZ7 299 aa13.7□□□□□ -0.22
SNTB1-201ENST00000395601 MRPL53Q96EL3 112 aaKnown RBP13.7□□□□□ -0.22
SNTB1-201ENST00000395601 VCYO14598 125 aa13.7□□□□□ -0.22
SNTB1-201ENST00000395601 TRBV12-3P01733 135 aa13.7□□□□□ -0.22
SNTB1-201ENST00000395601 EBI3Q14213 229 aa13.7□□□□□ -0.22
SNTB1-201ENST00000395601 AGPAT4-IT1Q9H0P7 198 aa13.7□□□□□ -0.22
SNTB1-201ENST00000395601 IGKV3D-20A0A0C4DH25 116 aa13.7□□□□□ -0.22
SNTB1-201ENST00000395601 BRWD1-AS2P59051 145 aa13.7□□□□□ -0.22
SNTB1-201ENST00000395601 CD300EQ496F6 205 aaPredicted RBP13.7□□□□□ -0.22
SNTB1-201ENST00000395601 Q6ZSV7 163 aa13.69□□□□□ -0.22
SNTB1-201ENST00000395601 PHLDA1Q8WV24 401 aaPredicted RBP13.69□□□□□ -0.22
SNTB1-201ENST00000395601 MRPL36Q9P0J6 103 aaKnown RBP13.69□□□□□ -0.22
SNTB1-201ENST00000395601 PATE2Q6UY27 113 aa13.69□□□□□ -0.22
SNTB1-201ENST00000395601 AMN1Q8IY45 258 aa13.69□□□□□ -0.22
SNTB1-201ENST00000395601 IGHV3-16A0A0C4DH30 117 aa13.69□□□□□ -0.22
SNTB1-201ENST00000395601 WIPF2Q8TF74 440 aaPredicted RBP13.69□□□□□ -0.22
SNTB1-201ENST00000395601 C5orf52A6NGY3 159 aa13.68□□□□□ -0.22
SNTB1-201ENST00000395601 RPL13AP40429 203 aaKnown RBP13.68□□□□□ -0.22
SNTB1-201ENST00000395601 TRAV8-6A0A0B4J262 113 aa13.68□□□□□ -0.22
SNTB1-201ENST00000395601 CXCL1P09341 107 aa13.68□□□□□ -0.22
SNTB1-201ENST00000395601 LAGE3Q14657 143 aa13.68□□□□□ -0.22
SNTB1-201ENST00000395601 NIT1Q86X76 327 aa13.68□□□□□ -0.22
SNTB1-201ENST00000395601 LRRK2Q5S007 2527 aa13.68□□□□□ -0.22
SNTB1-201ENST00000395601 PLP1P60201 277 aa13.68□□□□□ -0.22
SNTB1-201ENST00000395601 RAB37Q96AX2 223 aa13.68□□□□□ -0.22
SNTB1-201ENST00000395601 WI2-2373I1.2A0A1W2PRP0 233 aa13.68□□□□□ -0.22
SNTB1-201ENST00000395601 A8MWV9 139 aa13.68□□□□□ -0.22
SNTB1-201ENST00000395601 C9JQL5 133 aa13.68□□□□□ -0.22
SNTB1-201ENST00000395601 NDUFA11Q86Y39 141 aa13.68□□□□□ -0.22
SNTB1-201ENST00000395601 COPS9Q8WXC6 57 aa13.68□□□□□ -0.22
SNTB1-201ENST00000395601 CSTL1Q9H114 145 aa13.68□□□□□ -0.22
SNTB1-201ENST00000395601 HOXA5P20719 270 aa13.67□□□□□ -0.22
SNTB1-201ENST00000395601 MRAP2Q96G30 205 aa13.67□□□□□ -0.22
SNTB1-201ENST00000395601 LOC102724200A0A096LPH7 203 aaPredicted RBP13.67□□□□□ -0.22
SNTB1-201ENST00000395601 A6NDN8 102 aa13.67□□□□□ -0.22
SNTB1-201ENST00000395601 DLX4Q92988 240 aaPredicted RBP13.67□□□□□ -0.22
SNTB1-201ENST00000395601 ZC2HC1AQ96GY0 325 aa13.67□□□□□ -0.22
SNTB1-201ENST00000395601 TRAV25A0A0B4J276 109 aa13.66□□□□□ -0.22
SNTB1-201ENST00000395601 LINC01549A6NIU2 74 aa13.66□□□□□ -0.22
SNTB1-201ENST00000395601 P0C879 139 aa13.66□□□□□ -0.22
SNTB1-201ENST00000395601 UNQ9165/PRO28630Q6UXU0 137 aa13.66□□□□□ -0.22
SNTB1-201ENST00000395601 HIST1H4GQ99525 98 aa13.66□□□□□ -0.22
SNTB1-201ENST00000395601 TMEM238LA0A1B0GVL6 79 aa13.66□□□□□ -0.22
SNTB1-201ENST00000395601 GAGE12JA6NER3 117 aa13.66□□□□□ -0.22
SNTB1-201ENST00000395601 A6NJY4 79 aa13.66□□□□□ -0.22
SNTB1-201ENST00000395601 GAGE1Q13065 139 aa13.66□□□□□ -0.22
SNTB1-201ENST00000395601 GAGE4Q13068 117 aa13.66□□□□□ -0.22
SNTB1-201ENST00000395601 GAGE5Q13069 117 aa13.66□□□□□ -0.22
SNTB1-201ENST00000395601 GAGE13Q4V321 117 aa13.66□□□□□ -0.22
SNTB1-201ENST00000395601 CT83Q5H943 113 aa13.66□□□□□ -0.22
SNTB1-201ENST00000395601 TMEM213A2RRL7 107 aa13.66□□□□□ -0.22
SNTB1-201ENST00000395601 SLC25A34Q6PIV7 304 aa13.66□□□□□ -0.22
SNTB1-201ENST00000395601 OR5A1Q8NGJ0 315 aa13.66□□□□□ -0.22
SNTB1-201ENST00000395601 FAM231BA6NCW3 169 aa13.65□□□□□ -0.22
SNTB1-201ENST00000395601 SMKR1H3BMG3 65 aa13.65□□□□□ -0.22
SNTB1-201ENST00000395601 INSL3P51460 131 aa13.65□□□□□ -0.22
SNTB1-201ENST00000395601 PIFOQ8TCI5 191 aa13.65□□□□□ -0.22
SNTB1-201ENST00000395601 C11orf52Q96A22 123 aa13.65□□□□□ -0.22
SNTB1-201ENST00000395601 SMR3AQ99954 134 aa13.65□□□□□ -0.22
SNTB1-201ENST00000395601 MYO9AB2RTY4 2548 aa13.65□□□□□ -0.22
SNTB1-201ENST00000395601 IGKV1OR2-108A0A075B7D4 117 aa13.65□□□□□ -0.22
SNTB1-201ENST00000395601 MORN5Q5VZ52 161 aa13.65□□□□□ -0.22
SNTB1-201ENST00000395601 CHCHD1Q96BP2 118 aaKnown RBP13.65□□□□□ -0.22
SNTB1-201ENST00000395601 SPXQ9BT56 116 aa13.65□□□□□ -0.22
SNTB1-201ENST00000395601 RBAKDNA6NC62 111 aa13.65□□□□□ -0.22
SNTB1-201ENST00000395601 TRPT1Q86TN4 253 aaKnown RBP13.65□□□□□ -0.22
SNTB1-201ENST00000395601 ZNF48Q96MX3 618 aaPredicted RBP13.65□□□□□ -0.22
SNTB1-201ENST00000395601 RANBP2P49792 3224 aaKnown RBP13.65□□□□□ -0.22
SNTB1-201ENST00000395601 MORN3Q6PF18 240 aaPredicted RBP13.64□□□□□ -0.23
SNTB1-201ENST00000395601 TMEM256Q8N2U0 113 aa13.64□□□□□ -0.23
SNTB1-201ENST00000395601 LENEPQ9Y5L5 61 aa13.64□□□□□ -0.23
SNTB1-201ENST00000395601 PRSS46E5RG02 174 aa13.64□□□□□ -0.23
SNTB1-201ENST00000395601 PKIAP61925 76 aa13.64□□□□□ -0.23
SNTB1-201ENST00000395601 SRSF2Q01130 221 aaKnown RBP13.64□□□□□ -0.23
SNTB1-201ENST00000395601 PYGO2Q9BRQ0 406 aa13.64□□□□□ -0.23
SNTB1-201ENST00000395601 TNRC6BQ9UPQ9 1833 aaKnown RBP13.64□□□□□ -0.23
SNTB1-201ENST00000395601 CCDC140Q96MF4 163 aa13.64□□□□□ -0.23
SNTB1-201ENST00000395601 JMJD1CQ15652 2540 aa13.64□□□□□ -0.23
SNTB1-201ENST00000395601 RNASE1P07998 156 aaKnown RBP13.63□□□□□ -0.23
SNTB1-201ENST00000395601 H7C2G1 150 aa13.63□□□□□ -0.23
SNTB1-201ENST00000395601 DNLZQ5SXM8 178 aa13.63□□□□□ -0.23
SNTB1-201ENST00000395601 OR2K2Q8NGT1 345 aa13.63□□□□□ -0.23
SNTB1-201ENST00000395601 FOSL1P15407 271 aa13.63□□□□□ -0.23
SNTB1-201ENST00000395601 TMEM61Q8N0U2 210 aa13.63□□□□□ -0.23
SNTB1-201ENST00000395601 AVPP01185 164 aa13.63□□□□□ -0.23
SNTB1-201ENST00000395601 TLN2Q9Y4G6 2542 aa13.63□□□□□ -0.23
SNTB1-201ENST00000395601 EIF4EBP1Q13541 118 aaPredicted RBP13.62□□□□□ -0.23
SNTB1-201ENST00000395601 GSN-AS1Q9NRJ2 163 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms