RNA–Protein interactions for RNA: ENST00000395198.7

HERC4-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HERC4, Length 4,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-204ENST00000395198 CFAP126Q5VTH2 177 aa3.16□□□□□ -1.9
HERC4-204ENST00000395198 ZNF584Q8IVC4 421 aa3.16□□□□□ -1.9
HERC4-204ENST00000395198 TAF15Q92804 592 aaKnown RBP eCLIP3.16□□□□□ -1.9
HERC4-204ENST00000395198 TOMM6Q96B49 74 aa3.16□□□□□ -1.9
HERC4-204ENST00000395198 DKK2Q9UBU2 259 aa3.16□□□□□ -1.9
HERC4-204ENST00000395198 KIAA2026Q5HYC2 2103 aa3.15□□□□□ -1.9
HERC4-204ENST00000395198 PCNX3Q9H6A9 2034 aa3.15□□□□□ -1.9
HERC4-204ENST00000395198 TRAV9-1A0A075B6T8 112 aa3.15□□□□□ -1.9
HERC4-204ENST00000395198 PINLYPA6NC86 204 aa3.15□□□□□ -1.9
HERC4-204ENST00000395198 IGHV3-7P01780 117 aa3.15□□□□□ -1.9
HERC4-204ENST00000395198 NPC2P61916 151 aa3.15□□□□□ -1.9
HERC4-204ENST00000395198 MYOZ3Q8TDC0 251 aa3.15□□□□□ -1.9
HERC4-204ENST00000395198 ZNF492Q9P255 531 aa3.15□□□□□ -1.9
HERC4-204ENST00000395198 LINC00474Q9P2X8 69 aa3.15□□□□□ -1.9
HERC4-204ENST00000395198 CSPG4Q6UVK1 2322 aa3.15□□□□□ -1.91
HERC4-204ENST00000395198 SZT2Q5T011 3432 aa3.15□□□□□ -1.91
HERC4-204ENST00000395198 IGHV3-15A0A0B4J1V0 119 aa3.15□□□□□ -1.91
HERC4-204ENST00000395198 E9PLD3 99 aa3.15□□□□□ -1.91
HERC4-204ENST00000395198 IGKCP01834 107 aa3.15□□□□□ -1.91
HERC4-204ENST00000395198 IL5P05113 134 aa3.15□□□□□ -1.91
HERC4-204ENST00000395198 RNASE4P34096 147 aaKnown RBP3.15□□□□□ -1.91
HERC4-204ENST00000395198 PMCHL1Q16048 86 aa3.15□□□□□ -1.91
HERC4-204ENST00000395198 C2orf50Q96LR7 162 aa3.15□□□□□ -1.91
HERC4-204ENST00000395198 TMEM243Q9BU79 118 aa3.15□□□□□ -1.91
HERC4-204ENST00000395198 EPDR1Q9UM22 224 aa3.15□□□□□ -1.91
HERC4-204ENST00000395198 ATP6V0E1O15342 81 aa3.15□□□□□ -1.91
HERC4-204ENST00000395198 CXCL5P42830 114 aa3.15□□□□□ -1.91
HERC4-204ENST00000395198 PLGLAQ15195 96 aa3.15□□□□□ -1.91
HERC4-204ENST00000395198 ZNF791Q3KP31 576 aaPredicted RBP3.15□□□□□ -1.91
HERC4-204ENST00000395198 NOTCH2NLQ7Z3S9 236 aa3.15□□□□□ -1.91
HERC4-204ENST00000395198 MPDZO75970 2070 aa3.15□□□□□ -1.91
HERC4-204ENST00000395198 THADAQ6YHU6 1953 aa3.15□□□□□ -1.91
HERC4-204ENST00000395198 PLXNB3Q9ULL4 1909 aa3.15□□□□□ -1.91
HERC4-204ENST00000395198 DSCAMO60469 2012 aa3.14□□□□□ -1.91
HERC4-204ENST00000395198 IGHV3-64DA0A0J9YX35 117 aa3.14□□□□□ -1.91
HERC4-204ENST00000395198 IL3RAP26951 378 aa3.14□□□□□ -1.91
HERC4-204ENST00000395198 DEFB108BQ8NET1 73 aa3.14□□□□□ -1.91
HERC4-204ENST00000395198 C11orf52Q96A22 123 aa3.14□□□□□ -1.91
HERC4-204ENST00000395198 RAB37Q96AX2 223 aa3.14□□□□□ -1.91
HERC4-204ENST00000395198 GABARAPL3Q9BY60 117 aa3.14□□□□□ -1.91
HERC4-204ENST00000395198 MED12Q93074 2177 aa3.14□□□□□ -1.91
HERC4-204ENST00000395198 DOCK9Q9BZ29 2069 aa3.14□□□□□ -1.91
HERC4-204ENST00000395198 UPK2O00526 184 aa3.14□□□□□ -1.91
HERC4-204ENST00000395198 FAM57BQ71RH2 274 aa3.14□□□□□ -1.91
HERC4-204ENST00000395198 CD177Q8N6Q3 437 aa3.14□□□□□ -1.91
HERC4-204ENST00000395198 TSKUQ8WUA8 353 aa3.14□□□□□ -1.91
HERC4-204ENST00000395198 Q96M85 177 aa3.14□□□□□ -1.91
HERC4-204ENST00000395198 CST11Q9H112 138 aa3.14□□□□□ -1.91
HERC4-204ENST00000395198 SCRT2Q9NQ03 307 aa3.14□□□□□ -1.91
HERC4-204ENST00000395198 CCDC168Q8NDH2 2452 aa3.14□□□□□ -1.91
HERC4-204ENST00000395198 SIP14410 1827 aa3.14□□□□□ -1.91
HERC4-204ENST00000395198 MGST3O14880 152 aa3.14□□□□□ -1.91
HERC4-204ENST00000395198 NXPH4O95158 308 aa3.14□□□□□ -1.91
HERC4-204ENST00000395198 SLC25A16P16260 332 aa3.14□□□□□ -1.91
HERC4-204ENST00000395198 DSCR4P56555 118 aaPredicted RBP3.14□□□□□ -1.91
HERC4-204ENST00000395198 CDK5R1Q15078 307 aa3.14□□□□□ -1.91
HERC4-204ENST00000395198 ZNF322Q6U7Q0 402 aaPredicted RBP3.14□□□□□ -1.91
HERC4-204ENST00000395198 MDP1Q86V88 176 aa3.14□□□□□ -1.91
HERC4-204ENST00000395198 CEND1Q8N111 149 aa3.14□□□□□ -1.91
HERC4-204ENST00000395198 EIF5A2Q9GZV4 153 aaKnown RBP3.14□□□□□ -1.91
HERC4-204ENST00000395198 MSRB1Q9NZV6 116 aa3.14□□□□□ -1.91
HERC4-204ENST00000395198 IGF2RP11717 2491 aa3.14□□□□□ -1.91
HERC4-204ENST00000395198 NAV3Q8IVL0 2385 aa3.14□□□□□ -1.91
HERC4-204ENST00000395198 FASNP49327 2511 aaKnown RBP3.14□□□□□ -1.91
HERC4-204ENST00000395198 UBE2L6O14933 153 aa3.13□□□□□ -1.91
HERC4-204ENST00000395198 MGAMO43451 1857 aa3.13□□□□□ -1.91
HERC4-204ENST00000395198 HLA-DQA1P01909 254 aa3.13□□□□□ -1.91
HERC4-204ENST00000395198 CSN1S1P47710 185 aa3.13□□□□□ -1.91
HERC4-204ENST00000395198 LINC01554Q52M75 96 aa3.13□□□□□ -1.91
HERC4-204ENST00000395198 C17orf82Q86X59 251 aaPredicted RBP3.13□□□□□ -1.91
HERC4-204ENST00000395198 OR5AS1Q8N127 324 aa3.13□□□□□ -1.91
HERC4-204ENST00000395198 Q9H3A6 140 aa3.13□□□□□ -1.91
HERC4-204ENST00000395198 CYTL1Q9NRR1 136 aa3.13□□□□□ -1.91
HERC4-204ENST00000395198 TECTAO75443 2155 aa3.13□□□□□ -1.91
HERC4-204ENST00000395198 LAMA3Q16787 3333 aa3.13□□□□□ -1.91
HERC4-204ENST00000395198 IGHV3OR16-13A0A075B7E8 117 aa3.13□□□□□ -1.91
HERC4-204ENST00000395198 KISS1Q15726 138 aa3.13□□□□□ -1.91
HERC4-204ENST00000395198 AMN1Q8IY45 258 aa3.13□□□□□ -1.91
HERC4-204ENST00000395198 ITLN1Q8WWA0 313 aa3.13□□□□□ -1.91
HERC4-204ENST00000395198 ITLN2Q8WWU7 325 aaPredicted RBP3.13□□□□□ -1.91
HERC4-204ENST00000395198 CHAC1Q9BUX1 264 aa3.13□□□□□ -1.91
HERC4-204ENST00000395198 PLXNB1O43157 2135 aa3.13□□□□□ -1.91
HERC4-204ENST00000395198 COL4A6Q14031 1691 aa3.13□□□□□ -1.91
HERC4-204ENST00000395198 A0A1B0GTL3 188 aa3.13□□□□□ -1.91
HERC4-204ENST00000395198 INAFM1C9JVW0 142 aa3.13□□□□□ -1.91
HERC4-204ENST00000395198 EFNA4P52798 201 aa3.13□□□□□ -1.91
HERC4-204ENST00000395198 EDDM3BP56851 147 aa3.13□□□□□ -1.91
HERC4-204ENST00000395198 KRTDAPP60985 99 aa3.13□□□□□ -1.91
HERC4-204ENST00000395198 HIST1H4AP62805 103 aaKnown RBP3.13□□□□□ -1.91
HERC4-204ENST00000395198 CHCHD2P9Q5T1J5 151 aaPredicted RBP3.13□□□□□ -1.91
HERC4-204ENST00000395198 C15orf53Q8NAA6 179 aa3.13□□□□□ -1.91
HERC4-204ENST00000395198 FAM57AQ8TBR7 257 aa3.13□□□□□ -1.91
HERC4-204ENST00000395198 SND1-IT1Q9HBX3 110 aa3.13□□□□□ -1.91
HERC4-204ENST00000395198 MANBALQ9NQG1 85 aa3.13□□□□□ -1.91
HERC4-204ENST00000395198 LRP4O75096 1905 aa3.13□□□□□ -1.91
HERC4-204ENST00000395198 GTF3C1Q12789 2109 aa3.13□□□□□ -1.91
HERC4-204ENST00000395198 CACNA1DQ01668 2161 aa3.13□□□□□ -1.91
HERC4-204ENST00000395198 C17orf112F2Z3M2 114 aa3.13□□□□□ -1.91
HERC4-204ENST00000395198 HMGN4O00479 90 aa3.13□□□□□ -1.91
HERC4-204ENST00000395198 NDUFB3O43676 98 aa3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms