RNA–Protein interactions for RNA: ENST00000394949.8

SIN3A-203, Transcript of SIN3 transcription regulator family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIN3A, Length 4,930 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-203ENST00000394949 NOTCH2Q04721 2471 aa13.71□□□□□ -0.21
SIN3A-203ENST00000394949 MGAMO43451 1857 aa13.71□□□□□ -0.21
SIN3A-203ENST00000394949 ZNF503-AS2A6NEH8 195 aa13.71□□□□□ -0.22
SIN3A-203ENST00000394949 PCNX2A6NKB5 2137 aa13.71□□□□□ -0.22
SIN3A-203ENST00000394949 NSUN5P1Q3KNT7 163 aa13.71□□□□□ -0.22
SIN3A-203ENST00000394949 RHODO00212 210 aa13.71□□□□□ -0.22
SIN3A-203ENST00000394949 TDRG1Q3Y452 100 aa13.71□□□□□ -0.22
SIN3A-203ENST00000394949 RNASE8Q8TDE3 154 aaKnown RBP13.71□□□□□ -0.22
SIN3A-203ENST00000394949 SAP30O75446 220 aa13.7□□□□□ -0.22
SIN3A-203ENST00000394949 IGHV3-73A0A0B4J1V6 119 aa13.7□□□□□ -0.22
SIN3A-203ENST00000394949 GATA3P23771 443 aa13.7□□□□□ -0.22
SIN3A-203ENST00000394949 SCRT2Q9NQ03 307 aa13.7□□□□□ -0.22
SIN3A-203ENST00000394949 LY6G6EA0A0G2JKS1 128 aa13.69□□□□□ -0.22
SIN3A-203ENST00000394949 LINC01356Q8N9X3 169 aa13.69□□□□□ -0.22
SIN3A-203ENST00000394949 C1orf159Q96HA4 380 aa13.69□□□□□ -0.22
SIN3A-203ENST00000394949 U3KQA8 63 aa13.69□□□□□ -0.22
SIN3A-203ENST00000394949 MALRD1Q5VYJ5 2156 aa13.69□□□□□ -0.22
SIN3A-203ENST00000394949 GAGE12JA6NER3 117 aa13.69□□□□□ -0.22
SIN3A-203ENST00000394949 I3L3M4 83 aa13.69□□□□□ -0.22
SIN3A-203ENST00000394949 GAGE7O76087 117 aa13.69□□□□□ -0.22
SIN3A-203ENST00000394949 GAGE12FP0CL80 117 aa13.69□□□□□ -0.22
SIN3A-203ENST00000394949 GAGE12GP0CL81 117 aa13.69□□□□□ -0.22
SIN3A-203ENST00000394949 GAGE12IP0CL82 117 aa13.69□□□□□ -0.22
SIN3A-203ENST00000394949 SAA4P35542 130 aa13.69□□□□□ -0.22
SIN3A-203ENST00000394949 GAGE4Q13068 117 aa13.69□□□□□ -0.22
SIN3A-203ENST00000394949 SDHAF1A6NFY7 115 aa13.69□□□□□ -0.22
SIN3A-203ENST00000394949 DEFB104AQ8WTQ1 72 aa13.69□□□□□ -0.22
SIN3A-203ENST00000394949 GTF3C1Q12789 2109 aa13.69□□□□□ -0.22
SIN3A-203ENST00000394949 LY6HO94772 140 aa13.69□□□□□ -0.22
SIN3A-203ENST00000394949 IGLV1-44P01699 117 aa13.68□□□□□ -0.22
SIN3A-203ENST00000394949 LAMTOR3Q9UHA4 124 aa13.68□□□□□ -0.22
SIN3A-203ENST00000394949 AMTNQ6UX39 209 aa13.68□□□□□ -0.22
SIN3A-203ENST00000394949 SOCS3O14543 225 aa13.68□□□□□ -0.22
SIN3A-203ENST00000394949 C8orf31Q8N9H6 132 aa13.68□□□□□ -0.22
SIN3A-203ENST00000394949 FAM120AOSQ5T036 256 aa13.67□□□□□ -0.22
SIN3A-203ENST00000394949 MUC6Q6W4X9 2439 aa13.67□□□□□ -0.22
SIN3A-203ENST00000394949 RNF138Q8WVD3 245 aa13.67□□□□□ -0.22
SIN3A-203ENST00000394949 J3QQQ9 107 aa13.67□□□□□ -0.22
SIN3A-203ENST00000394949 SRSF2Q01130 221 aaKnown RBP13.67□□□□□ -0.22
SIN3A-203ENST00000394949 C6orf226Q5I0X4 101 aa13.67□□□□□ -0.22
SIN3A-203ENST00000394949 INSP01308 110 aa13.67□□□□□ -0.22
SIN3A-203ENST00000394949 LOXP28300 417 aaPredicted RBP13.67□□□□□ -0.22
SIN3A-203ENST00000394949 UBE2E1P51965 193 aa13.67□□□□□ -0.22
SIN3A-203ENST00000394949 KRTAP27-1Q3LI81 207 aa13.67□□□□□ -0.22
SIN3A-203ENST00000394949 ZFHX2Q9C0A1 2572 aaPredicted RBP13.66□□□□□ -0.22
SIN3A-203ENST00000394949 TEX48A0A1B0GUV7 120 aa13.66□□□□□ -0.22
SIN3A-203ENST00000394949 PLA2G2CQ5R387 149 aa13.66□□□□□ -0.22
SIN3A-203ENST00000394949 C8orf86Q6ZUL3 223 aa13.66□□□□□ -0.22
SIN3A-203ENST00000394949 PCP2Q8IVA1 136 aa13.66□□□□□ -0.22
SIN3A-203ENST00000394949 PLXND1Q9Y4D7 1925 aa13.66□□□□□ -0.22
SIN3A-203ENST00000394949 TRGV1A0A0A0MS02 117 aa13.66□□□□□ -0.22
SIN3A-203ENST00000394949 GAGE5Q13069 117 aa13.66□□□□□ -0.22
SIN3A-203ENST00000394949 GAGE6Q13070 117 aa13.66□□□□□ -0.22
SIN3A-203ENST00000394949 IGLV3-9A0A075B6K5 115 aa13.66□□□□□ -0.22
SIN3A-203ENST00000394949 VWC2LB2RUY7 222 aa13.66□□□□□ -0.22
SIN3A-203ENST00000394949 IGF2BP2-AS1Q96M15 143 aa13.66□□□□□ -0.22
SIN3A-203ENST00000394949 TRAV13-1A0A0B4J241 112 aa13.65□□□□□ -0.22
SIN3A-203ENST00000394949 NDUFA12Q9UI09 145 aa13.65□□□□□ -0.22
SIN3A-203ENST00000394949 MSMBP08118 114 aa13.65□□□□□ -0.22
SIN3A-203ENST00000394949 ZNF493Q6ZR52 646 aa13.65□□□□□ -0.22
SIN3A-203ENST00000394949 TRBV25-1A0A075B6N4 114 aa13.65□□□□□ -0.22
SIN3A-203ENST00000394949 TRAV26-2A0A0B4J265 109 aa13.65□□□□□ -0.22
SIN3A-203ENST00000394949 IGLL5B9A064 214 aa13.65□□□□□ -0.22
SIN3A-203ENST00000394949 ZNF491Q8N8L2 437 aa13.65□□□□□ -0.22
SIN3A-203ENST00000394949 C11orf1Q9H5F2 150 aa13.64□□□□□ -0.23
SIN3A-203ENST00000394949 HIGD1BQ9P298 99 aa13.64□□□□□ -0.23
SIN3A-203ENST00000394949 HELZP42694 1942 aaKnown RBP13.64□□□□□ -0.23
SIN3A-203ENST00000394949 TAX1BP3O14907 124 aa13.64□□□□□ -0.23
SIN3A-203ENST00000394949 FOXI2Q6ZQN5 318 aa13.64□□□□□ -0.23
SIN3A-203ENST00000394949 TPSG1Q9NRR2 321 aa13.64□□□□□ -0.23
SIN3A-203ENST00000394949 SPG11Q96JI7 2443 aa13.63□□□□□ -0.23
SIN3A-203ENST00000394949 OVOL3O00110 214 aa13.63□□□□□ -0.23
SIN3A-203ENST00000394949 ATP6V0E1O15342 81 aa13.63□□□□□ -0.23
SIN3A-203ENST00000394949 IGHG4P01861 327 aa13.63□□□□□ -0.23
SIN3A-203ENST00000394949 PRR30Q53SZ7 412 aaPredicted RBP13.63□□□□□ -0.23
SIN3A-203ENST00000394949 KLHL30-AS1Q8NEE0 82 aa13.63□□□□□ -0.23
SIN3A-203ENST00000394949 ANXA2RQ3ZCQ2 193 aa13.63□□□□□ -0.23
SIN3A-203ENST00000394949 CARD19Q96LW7 228 aa13.63□□□□□ -0.23
SIN3A-203ENST00000394949 ANKRD39Q53RE8 183 aa13.62□□□□□ -0.23
SIN3A-203ENST00000394949 DUX4L9Q6RFH8 374 aaPredicted RBP13.62□□□□□ -0.23
SIN3A-203ENST00000394949 RNF114Q9Y508 228 aa13.62□□□□□ -0.23
SIN3A-203ENST00000394949 RBAKDNA6NC62 111 aa13.62□□□□□ -0.23
SIN3A-203ENST00000394949 DKK1O94907 266 aa13.62□□□□□ -0.23
SIN3A-203ENST00000394949 CFC1BP0CG36 223 aa13.62□□□□□ -0.23
SIN3A-203ENST00000394949 CFC1P0CG37 223 aa13.62□□□□□ -0.23
SIN3A-203ENST00000394949 ASPHD1Q5U4P2 390 aa13.62□□□□□ -0.23
SIN3A-203ENST00000394949 MORN5Q5VZ52 161 aa13.62□□□□□ -0.23
SIN3A-203ENST00000394949 LENEPQ9Y5L5 61 aa13.62□□□□□ -0.23
SIN3A-203ENST00000394949 MRPL53Q96EL3 112 aaKnown RBP13.62□□□□□ -0.23
SIN3A-203ENST00000394949 NTN5Q8WTR8 489 aaPredicted RBP13.61□□□□□ -0.23
SIN3A-203ENST00000394949 ZGRF1Q86YA3 2104 aa13.61□□□□□ -0.23
SIN3A-203ENST00000394949 SP5Q6BEB4 398 aaPredicted RBP13.61□□□□□ -0.23
SIN3A-203ENST00000394949 C15orf53Q8NAA6 179 aa13.61□□□□□ -0.23
SIN3A-203ENST00000394949 IGHV1-69DA0A0B4J2H0 117 aa13.61□□□□□ -0.23
SIN3A-203ENST00000394949 PRSS29PA6NIE9 313 aa13.61□□□□□ -0.23
SIN3A-203ENST00000394949 NDUFA4O00483 81 aa13.61□□□□□ -0.23
SIN3A-203ENST00000394949 KAAG1Q9UBP8 84 aa13.61□□□□□ -0.23
SIN3A-203ENST00000394949 IGHV1OR15-1A0A075B7D0 117 aa13.6□□□□□ -0.23
SIN3A-203ENST00000394949 FGF23Q9GZV9 251 aaPredicted RBP13.6□□□□□ -0.23
SIN3A-203ENST00000394949 EGR2P11161 476 aaPredicted RBP13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms