RNA–Protein interactions for RNA: ENST00000394752.7

SFMBT1-201, Transcript of Scm like with four mbt domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SFMBT1, Length 4,548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFMBT1-201ENST00000394752 GTSF1Q8WW33 167 aa11.53□□□□□ -0.56
SFMBT1-201ENST00000394752 SIGLEC8Q9NYZ4 499 aa11.53□□□□□ -0.56
SFMBT1-201ENST00000394752 IGHV3-64A0A075B6Q5 118 aa11.52□□□□□ -0.56
SFMBT1-201ENST00000394752 LAGE3Q14657 143 aa11.52□□□□□ -0.56
SFMBT1-201ENST00000394752 C9orf139Q6ZV77 190 aa11.52□□□□□ -0.56
SFMBT1-201ENST00000394752 SPEGQ15772 3267 aa11.52□□□□□ -0.56
SFMBT1-201ENST00000394752 FAM110DQ8TAY7 271 aaPredicted RBP11.52□□□□□ -0.57
SFMBT1-201ENST00000394752 DUX3Q96PT4 197 aa11.52□□□□□ -0.57
SFMBT1-201ENST00000394752 CELSR3Q9NYQ7 3312 aa11.52□□□□□ -0.57
SFMBT1-201ENST00000394752 IGKV1D-37A0A075B6S9 117 aa11.52□□□□□ -0.57
SFMBT1-201ENST00000394752 A0A087WWL8 130 aa11.52□□□□□ -0.57
SFMBT1-201ENST00000394752 ZNF418Q8TF45 676 aaPredicted RBP11.52□□□□□ -0.57
SFMBT1-201ENST00000394752 RAX2Q96IS3 184 aa11.52□□□□□ -0.57
SFMBT1-201ENST00000394752 MRPS16Q9Y3D3 137 aaKnown RBP11.52□□□□□ -0.57
SFMBT1-201ENST00000394752 IGHV3-73A0A0B4J1V6 119 aa11.51□□□□□ -0.57
SFMBT1-201ENST00000394752 TNRC18O15417 2968 aaPredicted RBP11.51□□□□□ -0.57
SFMBT1-201ENST00000394752 PKD1L2Q7Z442 2459 aa11.51□□□□□ -0.57
SFMBT1-201ENST00000394752 IGHV2-70DA0A0C4DH43 119 aa11.51□□□□□ -0.57
SFMBT1-201ENST00000394752 EGR2P11161 476 aaPredicted RBP11.51□□□□□ -0.57
SFMBT1-201ENST00000394752 UBE2V1Q13404 147 aa11.51□□□□□ -0.57
SFMBT1-201ENST00000394752 OVOL1O14753 267 aa11.51□□□□□ -0.57
SFMBT1-201ENST00000394752 C8orf86Q6ZUL3 223 aa11.51□□□□□ -0.57
SFMBT1-201ENST00000394752 MSRB1Q9NZV6 116 aa11.51□□□□□ -0.57
SFMBT1-201ENST00000394752 CYSLTR1Q9Y271 337 aa11.51□□□□□ -0.57
SFMBT1-201ENST00000394752 COX11Q9Y6N1 276 aa11.51□□□□□ -0.57
SFMBT1-201ENST00000394752 TEX22C9J3V5 150 aa11.5□□□□□ -0.57
SFMBT1-201ENST00000394752 HSD52Q0P140 79 aa11.5□□□□□ -0.57
SFMBT1-201ENST00000394752 DYNAPQ8N1N2 210 aa11.5□□□□□ -0.57
SFMBT1-201ENST00000394752 FN1P02751 2386 aaKnown RBP11.5□□□□□ -0.57
SFMBT1-201ENST00000394752 IGKV3D-20A0A0C4DH25 116 aa11.5□□□□□ -0.57
SFMBT1-201ENST00000394752 LINC00322Q6ZN03 302 aaPredicted RBP11.5□□□□□ -0.57
SFMBT1-201ENST00000394752 OR11H6Q8NGC7 330 aa11.5□□□□□ -0.57
SFMBT1-201ENST00000394752 TNFRSF18Q9Y5U5 241 aa11.5□□□□□ -0.57
SFMBT1-201ENST00000394752 PAX1P15863 534 aa11.5□□□□□ -0.57
SFMBT1-201ENST00000394752 RPL13AP40429 203 aaKnown RBP11.5□□□□□ -0.57
SFMBT1-201ENST00000394752 SEC11AP67812 179 aa11.5□□□□□ -0.57
SFMBT1-201ENST00000394752 GEMIN7Q9H840 131 aaKnown RBP11.5□□□□□ -0.57
SFMBT1-201ENST00000394752 CHTOPQ9Y3Y2 248 aaKnown RBP11.5□□□□□ -0.57
SFMBT1-201ENST00000394752 A0A1B0GWB2 263 aa11.5□□□□□ -0.57
SFMBT1-201ENST00000394752 PPP1R17O96001 155 aa11.5□□□□□ -0.57
SFMBT1-201ENST00000394752 GATA1P15976 413 aaPredicted RBP11.5□□□□□ -0.57
SFMBT1-201ENST00000394752 ZNF815PA8K554 130 aa11.49□□□□□ -0.57
SFMBT1-201ENST00000394752 INS-IGF2F8WCM5 200 aa11.49□□□□□ -0.57
SFMBT1-201ENST00000394752 ORMDL2Q53FV1 153 aa11.49□□□□□ -0.57
SFMBT1-201ENST00000394752 IGLV2-8P01709 118 aa11.49□□□□□ -0.57
SFMBT1-201ENST00000394752 LINC01587Q99440 93 aa11.49□□□□□ -0.57
SFMBT1-201ENST00000394752 F6UB75 175 aa11.48□□□□□ -0.57
SFMBT1-201ENST00000394752 KIR3DS1Q14943 382 aa11.48□□□□□ -0.57
SFMBT1-201ENST00000394752 IGHV7-81A0A0B4J1V7 117 aa11.48□□□□□ -0.57
SFMBT1-201ENST00000394752 B4DSR2 109 aa11.48□□□□□ -0.57
SFMBT1-201ENST00000394752 Q8N7P7 452 aa11.48□□□□□ -0.57
SFMBT1-201ENST00000394752 OR9G4Q8NGQ1 327 aa11.48□□□□□ -0.57
SFMBT1-201ENST00000394752 PRSS22Q9GZN4 317 aa11.48□□□□□ -0.57
SFMBT1-201ENST00000394752 SYNJ2BPP57105 145 aa11.47□□□□□ -0.57
SFMBT1-201ENST00000394752 LINC00477Q96M19 166 aa11.47□□□□□ -0.57
SFMBT1-201ENST00000394752 TMEM8BA6NDV4 472 aa11.47□□□□□ -0.57
SFMBT1-201ENST00000394752 RIPPLY3P57055 190 aa11.47□□□□□ -0.57
SFMBT1-201ENST00000394752 NEGR1Q7Z3B1 354 aa11.47□□□□□ -0.57
SFMBT1-201ENST00000394752 WIPF2Q8TF74 440 aaPredicted RBP11.47□□□□□ -0.57
SFMBT1-201ENST00000394752 AGPAT4-IT1Q9H0P7 198 aa11.47□□□□□ -0.57
SFMBT1-201ENST00000394752 CSTL1Q9H114 145 aa11.47□□□□□ -0.57
SFMBT1-201ENST00000394752 CTSGP08311 255 aa11.47□□□□□ -0.57
SFMBT1-201ENST00000394752 DPH3P1Q9H4G8 78 aa11.47□□□□□ -0.57
SFMBT1-201ENST00000394752 COL6A3P12111 3177 aa11.47□□□□□ -0.57
SFMBT1-201ENST00000394752 HOXB4P17483 251 aaPredicted RBP11.47□□□□□ -0.57
SFMBT1-201ENST00000394752 SAMD5Q5TGI4 173 aa11.47□□□□□ -0.57
SFMBT1-201ENST00000394752 C1orf122Q6ZSJ8 110 aa11.47□□□□□ -0.57
SFMBT1-201ENST00000394752 DTX2Q86UW9 622 aa11.47□□□□□ -0.57
SFMBT1-201ENST00000394752 IGHV1-69DA0A0B4J2H0 117 aa11.46□□□□□ -0.57
SFMBT1-201ENST00000394752 IGHV1-69P01742 117 aa11.46□□□□□ -0.57
SFMBT1-201ENST00000394752 SUMO2P61956 95 aaKnown RBP11.46□□□□□ -0.57
SFMBT1-201ENST00000394752 FOXE3Q13461 319 aa11.46□□□□□ -0.57
SFMBT1-201ENST00000394752 ZNF479Q96JC4 524 aa11.46□□□□□ -0.57
SFMBT1-201ENST00000394752 A0A0U1RRA0 63 aa11.46□□□□□ -0.58
SFMBT1-201ENST00000394752 CRXO43186 299 aaPredicted RBP11.46□□□□□ -0.58
SFMBT1-201ENST00000394752 ZNF747Q9BV97 191 aa11.46□□□□□ -0.58
SFMBT1-201ENST00000394752 VCX2Q9H322 139 aa11.46□□□□□ -0.58
SFMBT1-201ENST00000394752 DAZ1Q9NQZ3 744 aaKnown RBP11.46□□□□□ -0.58
SFMBT1-201ENST00000394752 DKK2Q9UBU2 259 aa11.46□□□□□ -0.58
SFMBT1-201ENST00000394752 ZFP36P26651 326 aaKnown RBP11.45□□□□□ -0.58
SFMBT1-201ENST00000394752 RRN3P1Q2M238 152 aa11.45□□□□□ -0.58
SFMBT1-201ENST00000394752 COL27A1Q8IZC6 1860 aaPredicted RBP11.45□□□□□ -0.58
SFMBT1-201ENST00000394752 IGLV11-55A0A075B6I3 123 aa11.45□□□□□ -0.58
SFMBT1-201ENST00000394752 PIP4P2Q8N4L2 257 aa11.45□□□□□ -0.58
SFMBT1-201ENST00000394752 GDF5OSQ5U4N7 250 aa11.45□□□□□ -0.58
SFMBT1-201ENST00000394752 PTPRBP23467 1997 aa11.45□□□□□ -0.58
SFMBT1-201ENST00000394752 GAGE12BA1L429 117 aa11.45□□□□□ -0.58
SFMBT1-201ENST00000394752 DEFB1P60022 68 aa11.45□□□□□ -0.58
SFMBT1-201ENST00000394752 PRAC2D3DTV9 90 aa11.44□□□□□ -0.58
SFMBT1-201ENST00000394752 H7C1H1 209 aa11.44□□□□□ -0.58
SFMBT1-201ENST00000394752 MSMBP08118 114 aa11.44□□□□□ -0.58
SFMBT1-201ENST00000394752 CRYGCP07315 174 aa11.44□□□□□ -0.58
SFMBT1-201ENST00000394752 ZNF876PQ49A33 203 aa11.44□□□□□ -0.58
SFMBT1-201ENST00000394752 PAPPA-AS1Q5QFB9 102 aa11.44□□□□□ -0.58
SFMBT1-201ENST00000394752 CD5LO43866 347 aa11.44□□□□□ -0.58
SFMBT1-201ENST00000394752 C1orf159Q96HA4 380 aa11.44□□□□□ -0.58
SFMBT1-201ENST00000394752 TP53TG3Q9ULZ0 132 aa11.44□□□□□ -0.58
SFMBT1-201ENST00000394752 TRAV12-2A0A075B6T6 113 aa11.43□□□□□ -0.58
SFMBT1-201ENST00000394752 USMG5Q96IX5 58 aa11.43□□□□□ -0.58
SFMBT1-201ENST00000394752 KLF12Q9Y4X4 402 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms