RNA–Protein interactions for RNA: ENST00000394555.6

EFEMP1-202, Transcript of EGF containing fibulin extracellular matrix protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFEMP1, Length 3,024 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFEMP1-202ENST00000394555 SRSF8Q9BRL6 282 aaKnown RBP12.72□□□□□ -0.37
EFEMP1-202ENST00000394555 KLRD1Q13241 179 aa12.71□□□□□ -0.37
EFEMP1-202ENST00000394555 WFDC12Q8WWY7 111 aa12.71□□□□□ -0.37
EFEMP1-202ENST00000394555 IGLV11-55A0A075B6I3 123 aa12.71□□□□□ -0.38
EFEMP1-202ENST00000394555 COX8CQ7Z4L0 72 aa12.71□□□□□ -0.38
EFEMP1-202ENST00000394555 A0A1B0GV72 72 aa12.7□□□□□ -0.38
EFEMP1-202ENST00000394555 A0A1B0GWB2 263 aa12.7□□□□□ -0.38
EFEMP1-202ENST00000394555 LAGE3Q14657 143 aa12.7□□□□□ -0.38
EFEMP1-202ENST00000394555 Q6ZS92 163 aa12.7□□□□□ -0.38
EFEMP1-202ENST00000394555 CLUHP3Q96NS8 147 aa12.7□□□□□ -0.38
EFEMP1-202ENST00000394555 ATP6V0BQ99437 205 aa12.7□□□□□ -0.38
EFEMP1-202ENST00000394555 RNF5Q99942 180 aa12.7□□□□□ -0.38
EFEMP1-202ENST00000394555 ANKRD11Q6UB99 2663 aaPredicted RBP12.7□□□□□ -0.38
EFEMP1-202ENST00000394555 LY6LH3BQJ8 138 aa12.7□□□□□ -0.38
EFEMP1-202ENST00000394555 CYSLTR1Q9Y271 337 aa12.7□□□□□ -0.38
EFEMP1-202ENST00000394555 SCGB1A1P11684 91 aa12.7□□□□□ -0.38
EFEMP1-202ENST00000394555 NDPQ00604 133 aa12.7□□□□□ -0.38
EFEMP1-202ENST00000394555 IGKV3D-20A0A0C4DH25 116 aa12.69□□□□□ -0.38
EFEMP1-202ENST00000394555 LINC01546A6NGU7 62 aa12.69□□□□□ -0.38
EFEMP1-202ENST00000394555 Q6ZQT7 251 aa12.69□□□□□ -0.38
EFEMP1-202ENST00000394555 CNFNQ9BYD5 112 aa12.69□□□□□ -0.38
EFEMP1-202ENST00000394555 C11orf21Q9P2W6 132 aa12.69□□□□□ -0.38
EFEMP1-202ENST00000394555 SPTBN2O15020 2390 aa12.69□□□□□ -0.38
EFEMP1-202ENST00000394555 IGLV2-18A0A075B6J9 118 aa12.69□□□□□ -0.38
EFEMP1-202ENST00000394555 CTSGP08311 255 aa12.69□□□□□ -0.38
EFEMP1-202ENST00000394555 SRSF1Q07955 248 aaKnown RBP eCLIP12.69□□□□□ -0.38
EFEMP1-202ENST00000394555 RRN3P1Q2M238 152 aa12.69□□□□□ -0.38
EFEMP1-202ENST00000394555 DPM3Q9P2X0 92 aa12.69□□□□□ -0.38
EFEMP1-202ENST00000394555 A0A087WX48 190 aa12.68□□□□□ -0.38
EFEMP1-202ENST00000394555 IGHV3-49A0A0A0MS15 119 aa12.68□□□□□ -0.38
EFEMP1-202ENST00000394555 RAB9AP51151 201 aa12.68□□□□□ -0.38
EFEMP1-202ENST00000394555 C5orf64Q2M2E5 130 aa12.68□□□□□ -0.38
EFEMP1-202ENST00000394555 LY6HO94772 140 aa12.68□□□□□ -0.38
EFEMP1-202ENST00000394555 NDUFS8O00217 210 aa12.67□□□□□ -0.38
EFEMP1-202ENST00000394555 SPRY2O43597 315 aa12.67□□□□□ -0.38
EFEMP1-202ENST00000394555 CKS1BP61024 79 aa12.67□□□□□ -0.38
EFEMP1-202ENST00000394555 SCGB2A2Q13296 93 aa12.67□□□□□ -0.38
EFEMP1-202ENST00000394555 SPANXN1Q5VSR9 72 aa12.67□□□□□ -0.38
EFEMP1-202ENST00000394555 SPATA25Q9BR10 227 aa12.67□□□□□ -0.38
EFEMP1-202ENST00000394555 C20orf78Q9BR46 151 aa12.67□□□□□ -0.38
EFEMP1-202ENST00000394555 ASH1LQ9NR48 2969 aaKnown RBP12.67□□□□□ -0.38
EFEMP1-202ENST00000394555 LINC01559Q495D7 138 aa12.67□□□□□ -0.38
EFEMP1-202ENST00000394555 IGFL3Q6UXB1 125 aa12.67□□□□□ -0.38
EFEMP1-202ENST00000394555 OR11H12B2RN74 326 aa12.66□□□□□ -0.38
EFEMP1-202ENST00000394555 J3KRW8 73 aa12.66□□□□□ -0.38
EFEMP1-202ENST00000394555 APOMO95445 188 aa12.66□□□□□ -0.38
EFEMP1-202ENST00000394555 OR11H1Q8NG94 326 aa12.66□□□□□ -0.38
EFEMP1-202ENST00000394555 OR11H2Q8NH07 326 aa12.66□□□□□ -0.38
EFEMP1-202ENST00000394555 AKAP13Q12802 2813 aa12.66□□□□□ -0.38
EFEMP1-202ENST00000394555 DEFB123Q8N688 67 aa12.66□□□□□ -0.38
EFEMP1-202ENST00000394555 NRACQ8N912 160 aa12.66□□□□□ -0.38
EFEMP1-202ENST00000394555 TAL2Q16559 108 aa12.65□□□□□ -0.38
EFEMP1-202ENST00000394555 PGPEP1Q9NXJ5 209 aa12.65□□□□□ -0.38
EFEMP1-202ENST00000394555 PLNP26678 52 aa12.65□□□□□ -0.38
EFEMP1-202ENST00000394555 PSMG3-AS1Q96PY0 264 aa12.65□□□□□ -0.38
EFEMP1-202ENST00000394555 AGPAT4-IT1Q9H0P7 198 aa12.65□□□□□ -0.38
EFEMP1-202ENST00000394555 OTOGLQ3ZCN5 2332 aa12.65□□□□□ -0.38
EFEMP1-202ENST00000394555 RELNP78509 3460 aa12.65□□□□□ -0.39
EFEMP1-202ENST00000394555 HOXA3O43365 443 aaPredicted RBP12.64□□□□□ -0.39
EFEMP1-202ENST00000394555 ZNF502Q8TBZ5 544 aa12.64□□□□□ -0.39
EFEMP1-202ENST00000394555 MRPL16Q9NX20 251 aaKnown RBP12.64□□□□□ -0.39
EFEMP1-202ENST00000394555 PRO0461Q9UI25 63 aa12.64□□□□□ -0.39
EFEMP1-202ENST00000394555 TRBV7-3A0A075B6L6 115 aa12.64□□□□□ -0.39
EFEMP1-202ENST00000394555 LOC107984156A0A0G2JMH3 177 aa12.64□□□□□ -0.39
EFEMP1-202ENST00000394555 MYMXA0A1B0GTQ4 84 aa12.64□□□□□ -0.39
EFEMP1-202ENST00000394555 SRSF2Q01130 221 aaKnown RBP12.64□□□□□ -0.39
EFEMP1-202ENST00000394555 ARL17AQ8IVW1 177 aa12.64□□□□□ -0.39
EFEMP1-202ENST00000394555 NPBQ8NG41 125 aa12.64□□□□□ -0.39
EFEMP1-202ENST00000394555 BSNQ9UPA5 3926 aa12.64□□□□□ -0.39
EFEMP1-202ENST00000394555 H7C1H1 209 aa12.63□□□□□ -0.39
EFEMP1-202ENST00000394555 HLA-DRB4P13762 266 aa12.63□□□□□ -0.39
EFEMP1-202ENST00000394555 SCGB3A1Q96QR1 104 aa12.63□□□□□ -0.39
EFEMP1-202ENST00000394555 HLA-DRB4X5D2U9 266 aa12.63□□□□□ -0.39
EFEMP1-202ENST00000394555 H3BVH4 76 aa12.63□□□□□ -0.39
EFEMP1-202ENST00000394555 F8VRH5 84 aa12.62□□□□□ -0.39
EFEMP1-202ENST00000394555 SYT8Q8NBV8 401 aa12.62□□□□□ -0.39
EFEMP1-202ENST00000394555 ZNF418Q8TF45 676 aaPredicted RBP12.62□□□□□ -0.39
EFEMP1-202ENST00000394555 TMEM78Q5T7P6 136 aa12.62□□□□□ -0.39
EFEMP1-202ENST00000394555 MORN3Q6PF18 240 aaPredicted RBP12.62□□□□□ -0.39
EFEMP1-202ENST00000394555 VKORC1Q9BQB6 163 aa12.62□□□□□ -0.39
EFEMP1-202ENST00000394555 SPTBN1Q01082 2364 aaKnown RBP12.62□□□□□ -0.39
EFEMP1-202ENST00000394555 TTC28Q96AY4 2481 aa12.62□□□□□ -0.39
EFEMP1-202ENST00000394555 SCGB2A1O75556 95 aa12.62□□□□□ -0.39
EFEMP1-202ENST00000394555 CLEC3BP05452 202 aa12.62□□□□□ -0.39
EFEMP1-202ENST00000394555 PSMB2P49721 201 aa12.62□□□□□ -0.39
EFEMP1-202ENST00000394555 SCGB1D4Q6XE38 83 aa12.62□□□□□ -0.39
EFEMP1-202ENST00000394555 DEFB104AQ8WTQ1 72 aa12.62□□□□□ -0.39
EFEMP1-202ENST00000394555 ZNF48Q96MX3 618 aaPredicted RBP12.62□□□□□ -0.39
EFEMP1-202ENST00000394555 RAXQ9Y2V3 346 aa12.62□□□□□ -0.39
EFEMP1-202ENST00000394555 IGHV7-4-1A0A0J9YVY3 117 aa12.61□□□□□ -0.39
EFEMP1-202ENST00000394555 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.61□□□□□ -0.39
EFEMP1-202ENST00000394555 B9A039 149 aa12.61□□□□□ -0.39
EFEMP1-202ENST00000394555 LINC01549A6NIU2 74 aa12.61□□□□□ -0.39
EFEMP1-202ENST00000394555 SRSF9Q13242 221 aaKnown RBP eCLIP12.61□□□□□ -0.39
EFEMP1-202ENST00000394555 C15orf32Q32M92 178 aa12.61□□□□□ -0.39
EFEMP1-202ENST00000394555 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.61□□□□□ -0.39
EFEMP1-202ENST00000394555 HIF1ANQ9NWT6 349 aa12.61□□□□□ -0.39
EFEMP1-202ENST00000394555 RIF1Q5UIP0 2472 aaKnown RBP12.61□□□□□ -0.39
EFEMP1-202ENST00000394555 NBASA2RRP1 2371 aa12.61□□□□□ -0.39
EFEMP1-202ENST00000394555 M0R381 172 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms