RNA–Protein interactions for RNA: ENST00000394456.9

GTF2F1-201, Transcript of general transcription factor IIF subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2F1, Length 2,731 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-201ENST00000394456 UBR5O95071 2799 aaPredicted RBP10.36□□□□□ -0.75
GTF2F1-201ENST00000394456 TRAV40A0A0B4J280 105 aa10.36□□□□□ -0.75
GTF2F1-201ENST00000394456 J3KRW8 73 aa10.36□□□□□ -0.75
GTF2F1-201ENST00000394456 Q6AWC8 147 aa10.36□□□□□ -0.75
GTF2F1-201ENST00000394456 DKK2Q9UBU2 259 aa10.36□□□□□ -0.75
GTF2F1-201ENST00000394456 PTPN13Q12923 2485 aa10.36□□□□□ -0.75
GTF2F1-201ENST00000394456 TRAV8-2A0A0B4J237 113 aa10.36□□□□□ -0.75
GTF2F1-201ENST00000394456 TRGV3P03979 118 aa10.36□□□□□ -0.75
GTF2F1-201ENST00000394456 UBE2V1Q13404 147 aa10.36□□□□□ -0.75
GTF2F1-201ENST00000394456 SAPCD1Q5SSQ6 148 aa10.36□□□□□ -0.75
GTF2F1-201ENST00000394456 CLEC2AQ6UVW9 174 aa10.36□□□□□ -0.75
GTF2F1-201ENST00000394456 IGKV3D-20A0A0C4DH25 116 aa10.35□□□□□ -0.75
GTF2F1-201ENST00000394456 VAMP3Q15836 100 aa10.35□□□□□ -0.75
GTF2F1-201ENST00000394456 FAM110DQ8TAY7 271 aaPredicted RBP10.35□□□□□ -0.75
GTF2F1-201ENST00000394456 NAA38Q9BRA0 125 aaKnown RBP10.35□□□□□ -0.75
GTF2F1-201ENST00000394456 TTTY13Q9BZ97 58 aa10.35□□□□□ -0.75
GTF2F1-201ENST00000394456 AGPAT4-IT1Q9H0P7 198 aa10.35□□□□□ -0.75
GTF2F1-201ENST00000394456 TRAV26-2A0A0B4J265 109 aa10.35□□□□□ -0.75
GTF2F1-201ENST00000394456 C21orf62-AS1Q17RA5 79 aa10.35□□□□□ -0.75
GTF2F1-201ENST00000394456 A0A1B0GW15 77 aa10.35□□□□□ -0.75
GTF2F1-201ENST00000394456 TRBV12-3P01733 135 aa10.35□□□□□ -0.75
GTF2F1-201ENST00000394456 FGF6P10767 208 aa10.35□□□□□ -0.75
GTF2F1-201ENST00000394456 COX8AP10176 69 aa10.34□□□□□ -0.75
GTF2F1-201ENST00000394456 A1L4Q6 167 aa10.34□□□□□ -0.75
GTF2F1-201ENST00000394456 IGHV4-38-2P0DP08 117 aa10.34□□□□□ -0.75
GTF2F1-201ENST00000394456 COX8CQ7Z4L0 72 aa10.34□□□□□ -0.75
GTF2F1-201ENST00000394456 PCP2Q8IVA1 136 aa10.34□□□□□ -0.75
GTF2F1-201ENST00000394456 PRR9Q5T870 116 aa10.33□□□□□ -0.76
GTF2F1-201ENST00000394456 LCNL1Q6ZST4 164 aa10.33□□□□□ -0.76
GTF2F1-201ENST00000394456 IGHV1-69DA0A0B4J2H0 117 aa10.33□□□□□ -0.76
GTF2F1-201ENST00000394456 FABP5P3A8MUU1 101 aa10.33□□□□□ -0.76
GTF2F1-201ENST00000394456 IGHV1-69P01742 117 aa10.33□□□□□ -0.76
GTF2F1-201ENST00000394456 AMMECR1LQ6DCA0 310 aa10.33□□□□□ -0.76
GTF2F1-201ENST00000394456 TRAV8-6A0A0B4J262 113 aa10.32□□□□□ -0.76
GTF2F1-201ENST00000394456 HBDP02042 147 aa10.32□□□□□ -0.76
GTF2F1-201ENST00000394456 DEFB125Q8N687 156 aa10.32□□□□□ -0.76
GTF2F1-201ENST00000394456 IFI27L1Q96BM0 104 aa10.32□□□□□ -0.76
GTF2F1-201ENST00000394456 CHD6Q8TD26 2715 aa10.32□□□□□ -0.76
GTF2F1-201ENST00000394456 BMI1P35226 326 aa10.32□□□□□ -0.76
GTF2F1-201ENST00000394456 S100A7AQ86SG5 101 aa10.32□□□□□ -0.76
GTF2F1-201ENST00000394456 C20orf173Q96LM9 149 aa10.32□□□□□ -0.76
GTF2F1-201ENST00000394456 MS4A6AQ9H2W1 248 aa10.32□□□□□ -0.76
GTF2F1-201ENST00000394456 TM4SF20Q53R12 229 aa10.31□□□□□ -0.76
GTF2F1-201ENST00000394456 UNQ9165/PRO28630Q6UXU0 137 aa10.31□□□□□ -0.76
GTF2F1-201ENST00000394456 C8orf86Q6ZUL3 223 aa10.31□□□□□ -0.76
GTF2F1-201ENST00000394456 NDUFS8O00217 210 aa10.31□□□□□ -0.76
GTF2F1-201ENST00000394456 TNFRSF6BO95407 300 aa10.31□□□□□ -0.76
GTF2F1-201ENST00000394456 LEPP41159 167 aa10.31□□□□□ -0.76
GTF2F1-201ENST00000394456 HIST1H1AQ02539 215 aaPredicted RBP10.31□□□□□ -0.76
GTF2F1-201ENST00000394456 C5orf56Q8N8D9 126 aa10.31□□□□□ -0.76
GTF2F1-201ENST00000394456 IGKV3-7A0A075B6H7 116 aa10.3□□□□□ -0.76
GTF2F1-201ENST00000394456 K7EP13 123 aa10.3□□□□□ -0.76
GTF2F1-201ENST00000394456 SMAD7O15105 426 aaKnown RBP10.3□□□□□ -0.76
GTF2F1-201ENST00000394456 NMUP48645 174 aa10.3□□□□□ -0.76
GTF2F1-201ENST00000394456 LY6EQ16553 131 aa10.3□□□□□ -0.76
GTF2F1-201ENST00000394456 SPOCK3Q9BQ16 436 aa10.3□□□□□ -0.76
GTF2F1-201ENST00000394456 IGKV2D-26A0A0A0MRZ7 120 aa10.3□□□□□ -0.76
GTF2F1-201ENST00000394456 GOSR1O95249 250 aa10.3□□□□□ -0.76
GTF2F1-201ENST00000394456 KIR3DS1Q14943 382 aa10.3□□□□□ -0.76
GTF2F1-201ENST00000394456 Q6ZS46 218 aa10.3□□□□□ -0.76
GTF2F1-201ENST00000394456 ZNF843Q8N446 348 aa10.3□□□□□ -0.76
GTF2F1-201ENST00000394456 OR4C5Q8NGB2 326 aa10.3□□□□□ -0.76
GTF2F1-201ENST00000394456 PIFOQ8TCI5 191 aa10.3□□□□□ -0.76
GTF2F1-201ENST00000394456 IGHV3-11P01762 117 aa10.29□□□□□ -0.76
GTF2F1-201ENST00000394456 SRSF1Q07955 248 aaKnown RBP eCLIP10.29□□□□□ -0.767e-7■■■□□ 14.9
GTF2F1-201ENST00000394456 FBLL1A6NHQ2 334 aaKnown RBP10.29□□□□□ -0.76
GTF2F1-201ENST00000394456 MSMBP08118 114 aa10.29□□□□□ -0.76
GTF2F1-201ENST00000394456 LINC01559Q495D7 138 aa10.29□□□□□ -0.76
GTF2F1-201ENST00000394456 UFC1Q9Y3C8 167 aa10.29□□□□□ -0.76
GTF2F1-201ENST00000394456 IGHV7-4-1A0A0J9YVY3 117 aa10.28□□□□□ -0.76
GTF2F1-201ENST00000394456 K7EMI3 77 aa10.28□□□□□ -0.76
GTF2F1-201ENST00000394456 EDN2P20800 178 aa10.28□□□□□ -0.76
GTF2F1-201ENST00000394456 LGALS9BQ3B8N2 356 aa10.28□□□□□ -0.76
GTF2F1-201ENST00000394456 LGALS9CQ6DKI2 356 aa10.28□□□□□ -0.76
GTF2F1-201ENST00000394456 C12orf54Q6X4T0 127 aa10.28□□□□□ -0.76
GTF2F1-201ENST00000394456 RPS20P60866 119 aaKnown RBP10.28□□□□□ -0.76
GTF2F1-201ENST00000394456 MAPK1IP1LQ8NDC0 245 aa10.28□□□□□ -0.76
GTF2F1-201ENST00000394456 TMEM158Q8WZ71 300 aa10.28□□□□□ -0.76
GTF2F1-201ENST00000394456 HIF1ANQ9NWT6 349 aa10.28□□□□□ -0.76
GTF2F1-201ENST00000394456 MOB4Q9Y3A3 225 aa10.28□□□□□ -0.76
GTF2F1-201ENST00000394456 NAV2Q8IVL1 2488 aa10.28□□□□□ -0.76
GTF2F1-201ENST00000394456 NBPF19A0A087WUL8 3843 aa10.27□□□□□ -0.76
GTF2F1-201ENST00000394456 F6UB75 175 aa10.27□□□□□ -0.76
GTF2F1-201ENST00000394456 AVPP01185 164 aa10.27□□□□□ -0.76
GTF2F1-201ENST00000394456 RBX1P62877 108 aa10.27□□□□□ -0.76
GTF2F1-201ENST00000394456 TMEM97Q5BJF2 176 aa10.27□□□□□ -0.76
GTF2F1-201ENST00000394456 DEFB104AQ8WTQ1 72 aa10.27□□□□□ -0.76
GTF2F1-201ENST00000394456 GLMPQ8WWB7 406 aa10.27□□□□□ -0.76
GTF2F1-201ENST00000394456 EEF1AKMT3Q96AZ1 226 aa10.27□□□□□ -0.76
GTF2F1-201ENST00000394456 MAP1LC3AQ9H492 121 aa10.27□□□□□ -0.76
GTF2F1-201ENST00000394456 H3BVH4 76 aa10.27□□□□□ -0.77
GTF2F1-201ENST00000394456 GPHB5Q86YW7 130 aa10.27□□□□□ -0.77
GTF2F1-201ENST00000394456 JMJD8Q96S16 334 aa10.27□□□□□ -0.77
GTF2F1-201ENST00000394456 METTL26Q96S19 204 aa10.27□□□□□ -0.77
GTF2F1-201ENST00000394456 CNFNQ9BYD5 112 aa10.27□□□□□ -0.77
GTF2F1-201ENST00000394456 KLK15Q9H2R5 256 aa10.27□□□□□ -0.77
GTF2F1-201ENST00000394456 C7orf71A4D174 169 aa10.27□□□□□ -0.77
GTF2F1-201ENST00000394456 H3BUX3 64 aa10.27□□□□□ -0.77
GTF2F1-201ENST00000394456 ATP5G2Q06055 141 aa10.27□□□□□ -0.77
GTF2F1-201ENST00000394456 TRAV41A0A0B4J266 112 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 107.2 ms