RNA–Protein interactions for RNA: ENST00000393150.7

CASP4-201, Transcript of caspase 4, humanhuman

TSL 1 (best) BASIC

Gene CASP4, Length 1,340 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-201ENST00000393150 LRTM2Q8N967 370 aa5.31□□□□□ -1.56
CASP4-201ENST00000393150 INO80EQ8NBZ0 244 aaPredicted RBP5.31□□□□□ -1.56
CASP4-201ENST00000393150 BPIFCQ8NFQ6 507 aa5.31□□□□□ -1.56
CASP4-201ENST00000393150 OR8A1Q8NGG7 326 aa5.31□□□□□ -1.56
CASP4-201ENST00000393150 OR51S1Q8NGJ8 323 aa5.31□□□□□ -1.56
CASP4-201ENST00000393150 SCGB3A2Q96PL1 93 aa5.31□□□□□ -1.56
CASP4-201ENST00000393150 LINC00467Q9BRT7 94 aa5.31□□□□□ -1.56
CASP4-201ENST00000393150 MBD2Q9UBB5 411 aa5.31□□□□□ -1.56
CASP4-201ENST00000393150 HMCN2Q8NDA2 5059 aa5.31□□□□□ -1.56
CASP4-201ENST00000393150 TRGV1A0A0A0MS02 117 aa5.3□□□□□ -1.56
CASP4-201ENST00000393150 IGLV5-39A0A0G2JS06 123 aa5.3□□□□□ -1.56
CASP4-201ENST00000393150 OR4E1P0C645 316 aa5.3□□□□□ -1.56
CASP4-201ENST00000393150 RPL7P18124 248 aaKnown RBP5.3□□□□□ -1.56
CASP4-201ENST00000393150 ORM2P19652 201 aa5.3□□□□□ -1.56
CASP4-201ENST00000393150 SRIP30626 198 aa5.3□□□□□ -1.56
CASP4-201ENST00000393150 DAZ2Q13117 558 aaKnown RBP5.3□□□□□ -1.56
CASP4-201ENST00000393150 PXDC1Q5TGL8 231 aa5.3□□□□□ -1.56
CASP4-201ENST00000393150 FAAP20Q6NZ36 180 aa5.3□□□□□ -1.56
CASP4-201ENST00000393150 LYPD5Q6UWN5 251 aa5.3□□□□□ -1.56
CASP4-201ENST00000393150 ALKAL2Q6UX46 152 aa5.3□□□□□ -1.56
CASP4-201ENST00000393150 KCNRGQ8N5I3 272 aa5.3□□□□□ -1.56
CASP4-201ENST00000393150 Q8N814 137 aa5.3□□□□□ -1.56
CASP4-201ENST00000393150 THAP6Q8TBB0 222 aa5.3□□□□□ -1.56
CASP4-201ENST00000393150 DPH3P1Q9H4G8 78 aa5.3□□□□□ -1.56
CASP4-201ENST00000393150 PRO0255Q9UI72 69 aa5.3□□□□□ -1.56
CASP4-201ENST00000393150 PIGBOS1A0A0B4J2F0 54 aa5.29□□□□□ -1.56
CASP4-201ENST00000393150 TEX13DA0A0J9YY54 714 aaPredicted RBP5.29□□□□□ -1.56
CASP4-201ENST00000393150 RAB19A4D1S5 217 aa5.29□□□□□ -1.56
CASP4-201ENST00000393150 CD3DP04234 171 aa5.29□□□□□ -1.56
CASP4-201ENST00000393150 TPT1P13693 172 aaKnown RBP5.29□□□□□ -1.56
CASP4-201ENST00000393150 H2BFSP57053 126 aa5.29□□□□□ -1.56
CASP4-201ENST00000393150 FLI1Q01543 452 aaPredicted RBP5.29□□□□□ -1.56
CASP4-201ENST00000393150 ZNF90Q03938 601 aa5.29□□□□□ -1.56
CASP4-201ENST00000393150 SMUG1Q53HV7 270 aa5.29□□□□□ -1.56
CASP4-201ENST00000393150 EIF5AL1Q6IS14 154 aaKnown RBP5.29□□□□□ -1.56
CASP4-201ENST00000393150 ZNF546Q86UE3 836 aa5.29□□□□□ -1.56
CASP4-201ENST00000393150 SVBPQ8N300 66 aa5.29□□□□□ -1.56
CASP4-201ENST00000393150 RNF182Q8N6D2 247 aa5.29□□□□□ -1.56
CASP4-201ENST00000393150 LINC00612Q8N6U2 182 aa5.29□□□□□ -1.56
CASP4-201ENST00000393150 OR1S1Q8NH92 325 aa5.29□□□□□ -1.56
CASP4-201ENST00000393150 TP53RKQ96S44 253 aa5.29□□□□□ -1.56
CASP4-201ENST00000393150 TRGV9Q99603 122 aa5.29□□□□□ -1.56
CASP4-201ENST00000393150 TXNDC17Q9BRA2 123 aa5.29□□□□□ -1.56
CASP4-201ENST00000393150 PYGO2Q9BRQ0 406 aa5.29□□□□□ -1.56
CASP4-201ENST00000393150 ZNF471Q9BX82 626 aaPredicted RBP5.29□□□□□ -1.56
CASP4-201ENST00000393150 CACNG5Q9UF02 275 aa5.29□□□□□ -1.56
CASP4-201ENST00000393150 HHLA3Q9XRX5 114 aa5.29□□□□□ -1.56
CASP4-201ENST00000393150 C14orf166Q9Y224 244 aaKnown RBP5.29□□□□□ -1.56
CASP4-201ENST00000393150 FUT9Q9Y231 359 aa5.29□□□□□ -1.56
CASP4-201ENST00000393150 USP17L23D6RBM5 183 aa5.28□□□□□ -1.56
CASP4-201ENST00000393150 ZNF324O75467 553 aaPredicted RBP5.28□□□□□ -1.56
CASP4-201ENST00000393150 SP6Q3SY56 376 aa5.28□□□□□ -1.56
CASP4-201ENST00000393150 SCGB2B2Q4G0G5 96 aa5.28□□□□□ -1.56
CASP4-201ENST00000393150 NMSQ5H8A3 153 aa5.28□□□□□ -1.56
CASP4-201ENST00000393150 CFAP161Q6P656 301 aa5.28□□□□□ -1.56
CASP4-201ENST00000393150 ACOT7LQ6ZUV0 252 aa5.28□□□□□ -1.56
CASP4-201ENST00000393150 SH2D6Q7Z4S9 175 aa5.28□□□□□ -1.56
CASP4-201ENST00000393150 STOML3Q8TAV4 291 aa5.28□□□□□ -1.56
CASP4-201ENST00000393150 TMEM37Q8WXS4 190 aa5.28□□□□□ -1.56
CASP4-201ENST00000393150 VSIG2Q96IQ7 327 aa5.28□□□□□ -1.56
CASP4-201ENST00000393150 TNFSF18Q9UNG2 199 aa5.28□□□□□ -1.56
CASP4-201ENST00000393150 RCL1Q9Y2P8 373 aaKnown RBP5.28□□□□□ -1.56
CASP4-201ENST00000393150 TRAV8-6A0A0B4J262 113 aa5.27□□□□□ -1.57
CASP4-201ENST00000393150 TRGV4A0A0C4DH28 118 aa5.27□□□□□ -1.57
CASP4-201ENST00000393150 SCO1O75880 301 aa5.27□□□□□ -1.57
CASP4-201ENST00000393150 ORM1P02763 201 aa5.27□□□□□ -1.57
CASP4-201ENST00000393150 HOXB5P09067 269 aa5.27□□□□□ -1.57
CASP4-201ENST00000393150 AKR1C4P17516 323 aa5.27□□□□□ -1.57
CASP4-201ENST00000393150 LEPP41159 167 aa5.27□□□□□ -1.57
CASP4-201ENST00000393150 ZNF415Q09FC8 603 aa5.27□□□□□ -1.57
CASP4-201ENST00000393150 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa5.27□□□□□ -1.57
CASP4-201ENST00000393150 Q6ZTI0 123 aa5.27□□□□□ -1.57
CASP4-201ENST00000393150 IQCF2Q8IXL9 164 aa5.27□□□□□ -1.57
CASP4-201ENST00000393150 NEXN-AS1Q8NBZ9 246 aa5.27□□□□□ -1.57
CASP4-201ENST00000393150 DTD1Q8TEA8 209 aa5.27□□□□□ -1.57
CASP4-201ENST00000393150 MITD1Q8WV92 249 aa5.27□□□□□ -1.57
CASP4-201ENST00000393150 RPUSD4Q96CM3 377 aaKnown RBP5.27□□□□□ -1.57
CASP4-201ENST00000393150 NMES1Q9C002 83 aa5.27□□□□□ -1.57
CASP4-201ENST00000393150 NKX6-2Q9C056 277 aaPredicted RBP5.27□□□□□ -1.57
CASP4-201ENST00000393150 DNAJC4Q9NNZ3 241 aa5.27□□□□□ -1.57
CASP4-201ENST00000393150 ANAPC10Q9UM13 185 aa5.27□□□□□ -1.57
CASP4-201ENST00000393150 KCNIP3Q9Y2W7 256 aa5.27□□□□□ -1.57
CASP4-201ENST00000393150 A0A0B4J2A0 478 aa5.26□□□□□ -1.57
CASP4-201ENST00000393150 E5RGE8 158 aa5.26□□□□□ -1.57
CASP4-201ENST00000393150 SNAPINO95295 136 aa5.26□□□□□ -1.57
CASP4-201ENST00000393150 APOC3P02656 99 aa5.26□□□□□ -1.57
CASP4-201ENST00000393150 BTN1A1Q13410 526 aa5.26□□□□□ -1.57
CASP4-201ENST00000393150 SMCO1Q147U7 214 aa5.26□□□□□ -1.57
CASP4-201ENST00000393150 SURF2Q15527 256 aaPredicted RBP5.26□□□□□ -1.57
CASP4-201ENST00000393150 TWIST1Q15672 202 aa5.26□□□□□ -1.57
CASP4-201ENST00000393150 AARDQ4LEZ3 155 aa5.26□□□□□ -1.57
CASP4-201ENST00000393150 HSD17B11Q8NBQ5 300 aa5.26□□□□□ -1.57
CASP4-201ENST00000393150 OR4D10Q8NGI6 311 aa5.26□□□□□ -1.57
CASP4-201ENST00000393150 PPP1R1CQ8WVI7 109 aa5.26□□□□□ -1.57
CASP4-201ENST00000393150 TMEM222Q9H0R3 208 aa5.26□□□□□ -1.57
CASP4-201ENST00000393150 SHPKQ9UHJ6 478 aa5.26□□□□□ -1.57
CASP4-201ENST00000393150 HIGD1AQ9Y241 93 aa5.26□□□□□ -1.57
CASP4-201ENST00000393150 TRAV12-3A0A0B4J271 114 aa5.25□□□□□ -1.57
CASP4-201ENST00000393150 IGHV3-38A0A0C4DH36 116 aa5.25□□□□□ -1.57
CASP4-201ENST00000393150 C9orf170A2RU37 121 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms