RNA–Protein interactions for RNA: ENST00000390466.1

TRAV39-201, Transcript of T cell receptor alpha variable 39, humanhuman

APPRIS P1 BASIC

Gene TRAV39, Length 331 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV39-201ENST00000390466 GAGE13Q4V321 117 aa2.66□□□□□ -1.98
TRAV39-201ENST00000390466 TMEM200BQ69YZ2 307 aa2.66□□□□□ -1.98
TRAV39-201ENST00000390466 HCP5Q6MZN7 132 aa2.66□□□□□ -1.98
TRAV39-201ENST00000390466 CFAP161Q6P656 301 aa2.66□□□□□ -1.98
TRAV39-201ENST00000390466 C22orf34Q6ZV56 151 aa2.66□□□□□ -1.98
TRAV39-201ENST00000390466 GTSCR1Q86UQ5 136 aa2.66□□□□□ -1.98
TRAV39-201ENST00000390466 TEN1Q86WV5 123 aa2.66□□□□□ -1.98
TRAV39-201ENST00000390466 SYT8Q8NBV8 401 aa2.66□□□□□ -1.98
TRAV39-201ENST00000390466 GLMPQ8WWB7 406 aa2.66□□□□□ -1.98
TRAV39-201ENST00000390466 RASL10AQ92737 203 aa2.66□□□□□ -1.98
TRAV39-201ENST00000390466 AJUBAQ96IF1 538 aa2.66□□□□□ -1.98
TRAV39-201ENST00000390466 FOXC2Q99958 501 aa2.66□□□□□ -1.98
TRAV39-201ENST00000390466 SRSF8Q9BRL6 282 aaKnown RBP2.66□□□□□ -1.98
TRAV39-201ENST00000390466 MAP1LC3AQ9H492 121 aa2.66□□□□□ -1.98
TRAV39-201ENST00000390466 NXT2Q9NPJ8 142 aaKnown RBP2.66□□□□□ -1.98
TRAV39-201ENST00000390466 PROCRQ9UNN8 238 aa2.66□□□□□ -1.98
TRAV39-201ENST00000390466 SIGLEC9Q9Y336 463 aa2.66□□□□□ -1.98
TRAV39-201ENST00000390466 TIMM8BQ9Y5J9 83 aaPredicted RBP2.66□□□□□ -1.98
TRAV39-201ENST00000390466 FRYQ5TBA9 3013 aa2.66□□□□□ -1.98
TRAV39-201ENST00000390466 CHD8Q9HCK8 2581 aa2.66□□□□□ -1.98
TRAV39-201ENST00000390466 AKAP13Q12802 2813 aa2.66□□□□□ -1.98
TRAV39-201ENST00000390466 ASPMQ8IZT6 3477 aa2.65□□□□□ -1.98
TRAV39-201ENST00000390466 NCOR2Q9Y618 2525 aa2.65□□□□□ -1.99
TRAV39-201ENST00000390466 NBEAQ8NFP9 2946 aa2.65□□□□□ -1.99
TRAV39-201ENST00000390466 IGLV11-55A0A075B6I3 123 aa2.65□□□□□ -1.99
TRAV39-201ENST00000390466 TMSB15BA0A087X1C1 80 aa2.65□□□□□ -1.99
TRAV39-201ENST00000390466 IGHV3-21A0A0B4J1V1 117 aa2.65□□□□□ -1.99
TRAV39-201ENST00000390466 IGKV3D-20A0A0C4DH25 116 aa2.65□□□□□ -1.99
TRAV39-201ENST00000390466 MBD3L4A6NDZ8 208 aaPredicted RBP2.65□□□□□ -1.99
TRAV39-201ENST00000390466 MBD3L3A6NE82 208 aaPredicted RBP2.65□□□□□ -1.99
TRAV39-201ENST00000390466 MBD3L5A6NJ08 208 aaPredicted RBP2.65□□□□□ -1.99
TRAV39-201ENST00000390466 F8VRH5 84 aa2.65□□□□□ -1.99
TRAV39-201ENST00000390466 LY6LH3BQJ8 138 aa2.65□□□□□ -1.99
TRAV39-201ENST00000390466 J3QR89 54 aa2.65□□□□□ -1.99
TRAV39-201ENST00000390466 SPRY3O43610 288 aa2.65□□□□□ -1.99
TRAV39-201ENST00000390466 TCL1BO95988 128 aa2.65□□□□□ -1.99
TRAV39-201ENST00000390466 TRGV3P03979 118 aa2.65□□□□□ -1.99
TRAV39-201ENST00000390466 SPINK8P0C7L1 97 aa2.65□□□□□ -1.99
TRAV39-201ENST00000390466 HLA-DMBP28068 263 aa2.65□□□□□ -1.99
TRAV39-201ENST00000390466 CKS2P33552 79 aa2.65□□□□□ -1.99
TRAV39-201ENST00000390466 EFNA4P52798 201 aa2.65□□□□□ -1.99
TRAV39-201ENST00000390466 ERCC8Q13216 396 aa2.65□□□□□ -1.99
TRAV39-201ENST00000390466 LPAL2Q16609 132 aa2.65□□□□□ -1.99
TRAV39-201ENST00000390466 KLK9Q2XQG4 91 aa2.65□□□□□ -1.99
TRAV39-201ENST00000390466 VMA21Q3ZAQ7 101 aa2.65□□□□□ -1.99
TRAV39-201ENST00000390466 ATP1A1-AS1Q5TC04 95 aa2.65□□□□□ -1.99
TRAV39-201ENST00000390466 Q6Q795 121 aa2.65□□□□□ -1.99
TRAV39-201ENST00000390466 ZNF474Q6S9Z5 364 aaPredicted RBP2.65□□□□□ -1.99
TRAV39-201ENST00000390466 IGFL2Q6UWQ7 119 aa2.65□□□□□ -1.99
TRAV39-201ENST00000390466 LYPD2Q6UXB3 125 aa2.65□□□□□ -1.99
TRAV39-201ENST00000390466 GFRALQ6UXV0 394 aa2.65□□□□□ -1.99
TRAV39-201ENST00000390466 NEXN-AS1Q8NBZ9 246 aa2.65□□□□□ -1.99
TRAV39-201ENST00000390466 MBD3L2Q8NHZ7 208 aaPredicted RBP2.65□□□□□ -1.99
TRAV39-201ENST00000390466 Q8TAT8 98 aa2.65□□□□□ -1.99
TRAV39-201ENST00000390466 PPDPFLQ8WWR9 84 aa2.65□□□□□ -1.99
TRAV39-201ENST00000390466 IGFBPL1Q8WX77 278 aa2.65□□□□□ -1.99
TRAV39-201ENST00000390466 PTH2Q96A98 100 aa2.65□□□□□ -1.99
TRAV39-201ENST00000390466 RPEQ96AT9 228 aa2.65□□□□□ -1.99
TRAV39-201ENST00000390466 PLEKHB2Q96CS7 222 aa2.65□□□□□ -1.99
TRAV39-201ENST00000390466 RNF125Q96EQ8 232 aa2.65□□□□□ -1.99
TRAV39-201ENST00000390466 FANCD2OSQ96PS1 177 aa2.65□□□□□ -1.99
TRAV39-201ENST00000390466 FAM110AQ9BQ89 295 aa2.65□□□□□ -1.99
TRAV39-201ENST00000390466 KLK9Q9UKQ9 250 aa2.65□□□□□ -1.99
TRAV39-201ENST00000390466 CYSLTR1Q9Y271 337 aa2.65□□□□□ -1.99
TRAV39-201ENST00000390466 MSRB2Q9Y3D2 182 aa2.65□□□□□ -1.99
TRAV39-201ENST00000390466 SMAD5-AS1Q9Y6J3 95 aa2.65□□□□□ -1.99
TRAV39-201ENST00000390466 ABCA2Q9BZC7 2435 aa2.64□□□□□ -1.99
TRAV39-201ENST00000390466 ZFHX4Q86UP3 3567 aa2.64□□□□□ -1.99
TRAV39-201ENST00000390466 IGLV4-69A0A075B6H9 119 aa2.64□□□□□ -1.99
TRAV39-201ENST00000390466 IGHV3-72A0A0B4J1Y9 119 aa2.64□□□□□ -1.99
TRAV39-201ENST00000390466 TRAV40A0A0B4J280 105 aa2.64□□□□□ -1.99
TRAV39-201ENST00000390466 CENPVL3A0A0U1RRI6 287 aa2.64□□□□□ -1.99
TRAV39-201ENST00000390466 MYMXA0A1B0GTQ4 84 aa2.64□□□□□ -1.99
TRAV39-201ENST00000390466 PRAC2D3DTV9 90 aa2.64□□□□□ -1.99
TRAV39-201ENST00000390466 TMEM178BH3BS89 294 aa2.64□□□□□ -1.99
TRAV39-201ENST00000390466 RHODO00212 210 aa2.64□□□□□ -1.99
TRAV39-201ENST00000390466 NDUFA3O95167 84 aa2.64□□□□□ -1.99
TRAV39-201ENST00000390466 APOMO95445 188 aa2.64□□□□□ -1.99
TRAV39-201ENST00000390466 TSHBP01222 138 aa2.64□□□□□ -1.99
TRAV39-201ENST00000390466 CRYGDP07320 174 aa2.64□□□□□ -1.99
TRAV39-201ENST00000390466 ZNF883P0CG24 379 aa2.64□□□□□ -1.99
TRAV39-201ENST00000390466 IGHV1-8P0DP01 117 aa2.64□□□□□ -1.99
TRAV39-201ENST00000390466 SLC25A16P16260 332 aa2.64□□□□□ -1.99
TRAV39-201ENST00000390466 TSPEAR-AS2P59090 65 aa2.64□□□□□ -1.99
TRAV39-201ENST00000390466 TNFAIP6P98066 277 aaPredicted RBP2.64□□□□□ -1.99
TRAV39-201ENST00000390466 NDPQ00604 133 aa2.64□□□□□ -1.99
TRAV39-201ENST00000390466 TWIST1Q15672 202 aa2.64□□□□□ -1.99
TRAV39-201ENST00000390466 TMEM95Q3KNT9 176 aa2.64□□□□□ -1.99
TRAV39-201ENST00000390466 SHISA2Q6UWI4 295 aa2.64□□□□□ -1.99
TRAV39-201ENST00000390466 DTX2Q86UW9 622 aa2.64□□□□□ -1.99
TRAV39-201ENST00000390466 DYNAPQ8N1N2 210 aa2.64□□□□□ -1.99
TRAV39-201ENST00000390466 POM121L12Q8N7R1 296 aa2.64□□□□□ -1.99
TRAV39-201ENST00000390466 DEFB108BQ8NET1 73 aa2.64□□□□□ -1.99
TRAV39-201ENST00000390466 NUP37Q8NFH4 326 aa2.64□□□□□ -1.99
TRAV39-201ENST00000390466 OR11H6Q8NGC7 330 aa2.64□□□□□ -1.99
TRAV39-201ENST00000390466 CFHR4Q92496 578 aa2.64□□□□□ -1.99
TRAV39-201ENST00000390466 DLX4Q92988 240 aaPredicted RBP2.64□□□□□ -1.99
TRAV39-201ENST00000390466 SMIM2Q9BVW6 85 aa2.64□□□□□ -1.99
TRAV39-201ENST00000390466 VCX2Q9H322 139 aa2.64□□□□□ -1.99
TRAV39-201ENST00000390466 KAAG1Q9UBP8 84 aa2.64□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 119.3 ms