RNA–Protein interactions for RNA: ENST00000381209.7

RPAIN-203, Transcript of RPA interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPAIN, Length 1,535 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-203ENST00000381209 KCNS1Q96KK3 526 aa13.03□□□□□ -0.32
RPAIN-203ENST00000381209 FAM19A4Q96LR4 140 aa13.03□□□□□ -0.32
RPAIN-203ENST00000381209 M0QZ24 198 aa13.02□□□□□ -0.33
RPAIN-203ENST00000381209 RNASE1P07998 156 aaKnown RBP13.02□□□□□ -0.33
RPAIN-203ENST00000381209 S100A12P80511 92 aa13.02□□□□□ -0.33
RPAIN-203ENST00000381209 CNFNQ9BYD5 112 aa13.02□□□□□ -0.33
RPAIN-203ENST00000381209 MS4A6AQ9H2W1 248 aa13.02□□□□□ -0.33
RPAIN-203ENST00000381209 ZFHX3Q15911 3703 aa13.01□□□□□ -0.33
RPAIN-203ENST00000381209 ZANQ9Y493 2812 aa13.01□□□□□ -0.33
RPAIN-203ENST00000381209 IGKV3D-20A0A0C4DH25 116 aa13.01□□□□□ -0.33
RPAIN-203ENST00000381209 ZNF705DP0CH99 300 aaPredicted RBP13.01□□□□□ -0.33
RPAIN-203ENST00000381209 ZNF705BP0CI00 300 aaPredicted RBP13.01□□□□□ -0.33
RPAIN-203ENST00000381209 SRD5A1P18405 259 aa13.01□□□□□ -0.33
RPAIN-203ENST00000381209 APRG1Q8IVJ8 170 aa13.01□□□□□ -0.33
RPAIN-203ENST00000381209 ZFAND2AQ8N6M9 145 aa13.01□□□□□ -0.33
RPAIN-203ENST00000381209 SAMD10Q9BYL1 202 aa13.01□□□□□ -0.33
RPAIN-203ENST00000381209 IQCJQ1A5X6 159 aa13□□□□□ -0.33
RPAIN-203ENST00000381209 C18orf65Q6ZTR6 163 aa13□□□□□ -0.33
RPAIN-203ENST00000381209 DPF1Q92782 380 aa13□□□□□ -0.33
RPAIN-203ENST00000381209 RCHY1Q96PM5 261 aa13□□□□□ -0.33
RPAIN-203ENST00000381209 C11orf21Q9P2W6 132 aa13□□□□□ -0.33
RPAIN-203ENST00000381209 K7EQG2 157 aa12.99□□□□□ -0.33
RPAIN-203ENST00000381209 GPX1P07203 203 aa12.99□□□□□ -0.33
RPAIN-203ENST00000381209 DMRTA1Q5VZB9 504 aa12.99□□□□□ -0.33
RPAIN-203ENST00000381209 OR1N2Q8NGR9 330 aa12.99□□□□□ -0.33
RPAIN-203ENST00000381209 C16orf95Q9H693 158 aa12.99□□□□□ -0.33
RPAIN-203ENST00000381209 PEMTQ9UBM1 199 aa12.99□□□□□ -0.33
RPAIN-203ENST00000381209 PDZD2O15018 2839 aa12.99□□□□□ -0.33
RPAIN-203ENST00000381209 ITPR3Q14573 2671 aa12.99□□□□□ -0.33
RPAIN-203ENST00000381209 HELZ2Q9BYK8 2649 aaKnown RBP12.99□□□□□ -0.33
RPAIN-203ENST00000381209 TRAV21A0A0B4J279 112 aa12.98□□□□□ -0.33
RPAIN-203ENST00000381209 PCP4L1A6NKN8 68 aa12.98□□□□□ -0.33
RPAIN-203ENST00000381209 SLURP1P55000 103 aa12.98□□□□□ -0.33
RPAIN-203ENST00000381209 SNRPD3P62318 126 aaKnown RBP12.98□□□□□ -0.33
RPAIN-203ENST00000381209 WFDC3Q8IUB2 231 aa12.98□□□□□ -0.33
RPAIN-203ENST00000381209 OR11H1Q8NG94 326 aa12.98□□□□□ -0.33
RPAIN-203ENST00000381209 ZNF418Q8TF45 676 aaPredicted RBP12.98□□□□□ -0.33
RPAIN-203ENST00000381209 NBPF19A0A087WUL8 3843 aa12.98□□□□□ -0.33
RPAIN-203ENST00000381209 F6UB75 175 aa12.98□□□□□ -0.33
RPAIN-203ENST00000381209 ZNF324O75467 553 aaPredicted RBP12.98□□□□□ -0.33
RPAIN-203ENST00000381209 PRR9Q5T870 116 aa12.98□□□□□ -0.33
RPAIN-203ENST00000381209 DEFB1P60022 68 aa12.97□□□□□ -0.33
RPAIN-203ENST00000381209 TWIST1Q15672 202 aa12.97□□□□□ -0.33
RPAIN-203ENST00000381209 DEFB136Q30KP8 78 aa12.97□□□□□ -0.33
RPAIN-203ENST00000381209 KHDC1LQ5JSQ8 128 aa12.97□□□□□ -0.33
RPAIN-203ENST00000381209 FAM104BQ5XKR9 115 aa12.97□□□□□ -0.33
RPAIN-203ENST00000381209 ADAMTSL5Q6ZMM2 481 aa12.97□□□□□ -0.33
RPAIN-203ENST00000381209 KLHL30-AS1Q8NEE0 82 aa12.97□□□□□ -0.33
RPAIN-203ENST00000381209 SELENOKQ9Y6D0 94 aa12.97□□□□□ -0.33
RPAIN-203ENST00000381209 NTF3P20783 257 aa12.96□□□□□ -0.33
RPAIN-203ENST00000381209 AMTP48728 403 aa12.96□□□□□ -0.33
RPAIN-203ENST00000381209 HILS1P60008 231 aa12.96□□□□□ -0.33
RPAIN-203ENST00000381209 PRR31Q5SQ13 230 aa12.96□□□□□ -0.33
RPAIN-203ENST00000381209 CDPF1Q6NVV7 123 aa12.96□□□□□ -0.33
RPAIN-203ENST00000381209 Q6ZWC4 215 aa12.96□□□□□ -0.33
RPAIN-203ENST00000381209 OR9G4Q8NGQ1 327 aa12.96□□□□□ -0.33
RPAIN-203ENST00000381209 ODF3Q96PU9 254 aa12.96□□□□□ -0.33
RPAIN-203ENST00000381209 U3KQK5 164 aa12.96□□□□□ -0.33
RPAIN-203ENST00000381209 TRAV2A0A0B4J234 112 aa12.95□□□□□ -0.34
RPAIN-203ENST00000381209 OR5AL1P0C617 328 aa12.95□□□□□ -0.34
RPAIN-203ENST00000381209 TFPI2P48307 235 aa12.95□□□□□ -0.34
RPAIN-203ENST00000381209 PSMG4Q5JS54 123 aa12.95□□□□□ -0.34
RPAIN-203ENST00000381209 NIT1Q86X76 327 aa12.95□□□□□ -0.34
RPAIN-203ENST00000381209 CHCHD1Q96BP2 118 aaKnown RBP12.95□□□□□ -0.34
RPAIN-203ENST00000381209 TMEM191AQ9H0A3 160 aa12.95□□□□□ -0.34
RPAIN-203ENST00000381209 GSN-AS1Q9NRJ2 163 aa12.95□□□□□ -0.34
RPAIN-203ENST00000381209 TEX15Q9BXT5 2789 aa12.95□□□□□ -0.34
RPAIN-203ENST00000381209 SNAI2O43623 268 aa12.94□□□□□ -0.34
RPAIN-203ENST00000381209 HSBP1O75506 76 aa12.94□□□□□ -0.34
RPAIN-203ENST00000381209 ZNF688P0C7X2 276 aa12.94□□□□□ -0.34
RPAIN-203ENST00000381209 UNC79Q9P2D8 2635 aa12.94□□□□□ -0.34
RPAIN-203ENST00000381209 IGHV4-4A0A075B6R2 117 aa12.93□□□□□ -0.34
RPAIN-203ENST00000381209 KLLNB2CW77 178 aa12.93□□□□□ -0.34
RPAIN-203ENST00000381209 PMCHP20382 165 aa12.93□□□□□ -0.34
RPAIN-203ENST00000381209 CACNG7P62955 275 aa12.93□□□□□ -0.34
RPAIN-203ENST00000381209 CCDC168Q8NDH2 2452 aa12.93□□□□□ -0.34
RPAIN-203ENST00000381209 LINC01006Q8NI28 216 aa12.93□□□□□ -0.34
RPAIN-203ENST00000381209 URB1-AS1Q96HZ7 61 aa12.93□□□□□ -0.34
RPAIN-203ENST00000381209 MUC21A0A0G2JKD1 596 aa12.93□□□□□ -0.34
RPAIN-203ENST00000381209 A0A0J9YX75 114 aa12.93□□□□□ -0.34
RPAIN-203ENST00000381209 MUC21A0A140T8X8 626 aa12.93□□□□□ -0.34
RPAIN-203ENST00000381209 LEPP41159 167 aa12.93□□□□□ -0.34
RPAIN-203ENST00000381209 MUC21Q5SSG8 566 aa12.93□□□□□ -0.34
RPAIN-203ENST00000381209 EBLN2Q6P2I7 272 aa12.93□□□□□ -0.34
RPAIN-203ENST00000381209 RNASEKQ6P5S7 137 aaKnown RBP12.93□□□□□ -0.34
RPAIN-203ENST00000381209 AMN1Q8IY45 258 aa12.93□□□□□ -0.34
RPAIN-203ENST00000381209 DLX4Q92988 240 aaPredicted RBP12.93□□□□□ -0.34
RPAIN-203ENST00000381209 JMJD8Q96S16 334 aa12.93□□□□□ -0.34
RPAIN-203ENST00000381209 DUSP14O95147 198 aaKnown RBP12.92□□□□□ -0.34
RPAIN-203ENST00000381209 NDUFA7O95182 113 aa12.92□□□□□ -0.34
RPAIN-203ENST00000381209 CSN3P07498 182 aa12.92□□□□□ -0.34
RPAIN-203ENST00000381209 MED14OSP0DP75 135 aa12.92□□□□□ -0.34
RPAIN-203ENST00000381209 RNASE4P34096 147 aaKnown RBP12.92□□□□□ -0.34
RPAIN-203ENST00000381209 SSTP61278 116 aa12.92□□□□□ -0.34
RPAIN-203ENST00000381209 Q6ZQT7 251 aa12.92□□□□□ -0.34
RPAIN-203ENST00000381209 ORMDL3Q8N138 153 aa12.92□□□□□ -0.34
RPAIN-203ENST00000381209 J3KRW8 73 aa12.91□□□□□ -0.34
RPAIN-203ENST00000381209 LY6G6DO95868 133 aa12.91□□□□□ -0.34
RPAIN-203ENST00000381209 SCGB1D1O95968 90 aa12.91□□□□□ -0.34
RPAIN-203ENST00000381209 LINC00614P0C842 121 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms