RNA–Protein interactions for RNA: ENST00000381089.7

VCX3A-201, Transcript of variable charge X-linked 3A, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VCX3A, Length 995 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-201ENST00000381089 LYPD1Q8N2G4 141 aa10.98□□□□□ -0.65
VCX3A-201ENST00000381089 VSIG2Q96IQ7 327 aa10.98□□□□□ -0.65
VCX3A-201ENST00000381089 ZNF471Q9BX82 626 aaPredicted RBP10.98□□□□□ -0.65
VCX3A-201ENST00000381089 SH3BGRL3Q9H299 93 aa10.98□□□□□ -0.65
VCX3A-201ENST00000381089 CYTL1Q9NRR1 136 aa10.98□□□□□ -0.65
VCX3A-201ENST00000381089 ICOSQ9Y6W8 199 aa10.98□□□□□ -0.65
VCX3A-201ENST00000381089 TRAV9-2A0A087WT02 112 aa10.97□□□□□ -0.65
VCX3A-201ENST00000381089 NXPH4O95158 308 aa10.97□□□□□ -0.65
VCX3A-201ENST00000381089 IGLC2P0DOY2 106 aa10.97□□□□□ -0.65
VCX3A-201ENST00000381089 ATP6V0CP27449 155 aa10.97□□□□□ -0.65
VCX3A-201ENST00000381089 LGALSLQ3ZCW2 172 aaPredicted RBP10.97□□□□□ -0.65
VCX3A-201ENST00000381089 C9orf62Q8N4C0 152 aa10.97□□□□□ -0.65
VCX3A-201ENST00000381089 TMEM37Q8WXS4 190 aa10.97□□□□□ -0.65
VCX3A-201ENST00000381089 GSN-AS1Q9NRJ2 163 aa10.97□□□□□ -0.65
VCX3A-201ENST00000381089 FUT9Q9Y231 359 aa10.97□□□□□ -0.65
VCX3A-201ENST00000381089 C7orf71A4D174 169 aa10.96□□□□□ -0.65
VCX3A-201ENST00000381089 PAX4O43316 350 aa10.96□□□□□ -0.65
VCX3A-201ENST00000381089 EIF4E3Q8N5X7 224 aaKnown RBP10.96□□□□□ -0.65
VCX3A-201ENST00000381089 OR1L4Q8NGR5 311 aa10.96□□□□□ -0.65
VCX3A-201ENST00000381089 SAT2Q96F10 170 aaPredicted RBP10.96□□□□□ -0.65
VCX3A-201ENST00000381089 DNAJC4Q9NNZ3 241 aa10.96□□□□□ -0.65
VCX3A-201ENST00000381089 H3BQ15 152 aa10.95□□□□□ -0.66
VCX3A-201ENST00000381089 ZNF253O75346 499 aa10.95□□□□□ -0.66
VCX3A-201ENST00000381089 SLAQ13239 276 aa10.95□□□□□ -0.66
VCX3A-201ENST00000381089 ANXA2RQ3ZCQ2 193 aa10.95□□□□□ -0.66
VCX3A-201ENST00000381089 Q5VSD8 79 aa10.95□□□□□ -0.66
VCX3A-201ENST00000381089 MORN5Q5VZ52 161 aa10.95□□□□□ -0.66
VCX3A-201ENST00000381089 MRPL53Q96EL3 112 aaKnown RBP10.95□□□□□ -0.66
VCX3A-201ENST00000381089 PFDN5Q99471 154 aa10.95□□□□□ -0.66
VCX3A-201ENST00000381089 LINC00467Q9BRT7 94 aa10.95□□□□□ -0.66
VCX3A-201ENST00000381089 TIMM9Q9Y5J7 89 aa10.95□□□□□ -0.66
VCX3A-201ENST00000381089 TRAV5A0A0B4J249 113 aa10.94□□□□□ -0.66
VCX3A-201ENST00000381089 ZNF324O75467 553 aaPredicted RBP10.94□□□□□ -0.66
VCX3A-201ENST00000381089 EIF3GO75821 320 aaKnown RBP eCLIP10.94□□□□□ -0.66
VCX3A-201ENST00000381089 RAB2AP61019 212 aa10.94□□□□□ -0.66
VCX3A-201ENST00000381089 C11orf72Q8NBR9 251 aa10.94□□□□□ -0.66
VCX3A-201ENST00000381089 FAT1Q14517 4588 aa10.93□□□□□ -0.66
VCX3A-201ENST00000381089 SPINK4O60575 86 aa10.93□□□□□ -0.66
VCX3A-201ENST00000381089 TCL1AP56279 114 aa10.93□□□□□ -0.66
VCX3A-201ENST00000381089 OR2G3Q8NGZ4 309 aa10.93□□□□□ -0.66
VCX3A-201ENST00000381089 LINC00477Q96M19 166 aa10.93□□□□□ -0.66
VCX3A-201ENST00000381089 PSMG3Q9BT73 122 aaPredicted RBP10.93□□□□□ -0.66
VCX3A-201ENST00000381089 PRO0255Q9UI72 69 aa10.93□□□□□ -0.66
VCX3A-201ENST00000381089 PRELID1Q9Y255 219 aa10.93□□□□□ -0.66
VCX3A-201ENST00000381089 KLLNB2CW77 178 aa10.92□□□□□ -0.66
VCX3A-201ENST00000381089 K7EP13 123 aa10.92□□□□□ -0.66
VCX3A-201ENST00000381089 XGP55808 180 aa10.92□□□□□ -0.66
VCX3A-201ENST00000381089 MRPL23Q16540 153 aaKnown RBP10.92□□□□□ -0.66
VCX3A-201ENST00000381089 ACOT6Q3I5F7 207 aaPredicted RBP10.92□□□□□ -0.66
VCX3A-201ENST00000381089 IBA57Q5T440 356 aaKnown RBP10.92□□□□□ -0.66
VCX3A-201ENST00000381089 FAM122CQ6P4D5 195 aa10.92□□□□□ -0.66
VCX3A-201ENST00000381089 MIR17HGQ75NE6 70 aa10.92□□□□□ -0.66
VCX3A-201ENST00000381089 BOLA1Q9Y3E2 137 aa10.92□□□□□ -0.66
VCX3A-201ENST00000381089 LY96Q9Y6Y9 160 aa10.92□□□□□ -0.66
VCX3A-201ENST00000381089 A0A087WTM6 91 aa10.91□□□□□ -0.66
VCX3A-201ENST00000381089 RGS13O14921 159 aa10.91□□□□□ -0.66
VCX3A-201ENST00000381089 GPX1P07203 203 aa10.91□□□□□ -0.66
VCX3A-201ENST00000381089 TPT1P13693 172 aaKnown RBP10.91□□□□□ -0.66
VCX3A-201ENST00000381089 RNASE4P34096 147 aaKnown RBP10.91□□□□□ -0.66
VCX3A-201ENST00000381089 FUSP35637 526 aaKnown RBP eCLIP10.91□□□□□ -0.66
VCX3A-201ENST00000381089 BTN1A1Q13410 526 aa10.91□□□□□ -0.66
VCX3A-201ENST00000381089 ICAM4Q14773 271 aa10.91□□□□□ -0.66
VCX3A-201ENST00000381089 NEGR1Q7Z3B1 354 aa10.91□□□□□ -0.66
VCX3A-201ENST00000381089 KLF12Q9Y4X4 402 aa10.91□□□□□ -0.66
VCX3A-201ENST00000381089 TRBV19A0A075B6N1 114 aa10.9□□□□□ -0.66
VCX3A-201ENST00000381089 IGHV3-53P01767 116 aa10.9□□□□□ -0.66
VCX3A-201ENST00000381089 NMBP08949 121 aa10.9□□□□□ -0.66
VCX3A-201ENST00000381089 HIST1H1EP10412 219 aaKnown RBP10.9□□□□□ -0.66
VCX3A-201ENST00000381089 EIF5AP63241 154 aaKnown RBP10.9□□□□□ -0.66
VCX3A-201ENST00000381089 ERCC8Q13216 396 aa10.9□□□□□ -0.66
VCX3A-201ENST00000381089 PDE6HQ13956 83 aa10.9□□□□□ -0.66
VCX3A-201ENST00000381089 LYPD5Q6UWN5 251 aa10.9□□□□□ -0.66
VCX3A-201ENST00000381089 OR10G4Q8NGN3 311 aa10.9□□□□□ -0.66
VCX3A-201ENST00000381089 OR10G9Q8NGN4 311 aa10.9□□□□□ -0.66
VCX3A-201ENST00000381089 OR10G7Q8NGN6 311 aa10.9□□□□□ -0.66
VCX3A-201ENST00000381089 VGLL1Q99990 258 aa10.9□□□□□ -0.66
VCX3A-201ENST00000381089 AAMDCQ9H7C9 122 aa10.9□□□□□ -0.66
VCX3A-201ENST00000381089 HHLA3Q9XRX5 114 aa10.9□□□□□ -0.66
VCX3A-201ENST00000381089 FAM229AH3BQW9 127 aa10.89□□□□□ -0.67
VCX3A-201ENST00000381089 M0R3E3 92 aa10.89□□□□□ -0.67
VCX3A-201ENST00000381089 HMGB3O15347 200 aaKnown RBP10.89□□□□□ -0.67
VCX3A-201ENST00000381089 DNAH10OSP0CZ25 163 aa10.89□□□□□ -0.67
VCX3A-201ENST00000381089 EVI2AP22794 236 aa10.89□□□□□ -0.67
VCX3A-201ENST00000381089 CRYBA4P53673 196 aa10.89□□□□□ -0.67
VCX3A-201ENST00000381089 SERF2P84101 59 aa10.89□□□□□ -0.67
VCX3A-201ENST00000381089 AKR1C8PQ5T2L2 129 aa10.89□□□□□ -0.67
VCX3A-201ENST00000381089 TMEM78Q5T7P6 136 aa10.89□□□□□ -0.67
VCX3A-201ENST00000381089 STOML3Q8TAV4 291 aa10.89□□□□□ -0.67
VCX3A-201ENST00000381089 PCNPQ8WW12 178 aaKnown RBP10.89□□□□□ -0.67
VCX3A-201ENST00000381089 TMED6Q8WW62 240 aa10.89□□□□□ -0.67
VCX3A-201ENST00000381089 SLC25A2Q9BXI2 301 aa10.89□□□□□ -0.67
VCX3A-201ENST00000381089 MRPL32Q9BYC8 188 aaKnown RBP10.89□□□□□ -0.67
VCX3A-201ENST00000381089 MSRB1Q9NZV6 116 aa10.89□□□□□ -0.67
VCX3A-201ENST00000381089 TNFRSF18Q9Y5U5 241 aa10.89□□□□□ -0.67
VCX3A-201ENST00000381089 A0A1W2PPV4 95 aa10.88□□□□□ -0.67
VCX3A-201ENST00000381089 MBP02144 154 aa10.88□□□□□ -0.67
VCX3A-201ENST00000381089 PYYP10082 97 aa10.88□□□□□ -0.67
VCX3A-201ENST00000381089 CRISP2P16562 243 aa10.88□□□□□ -0.67
VCX3A-201ENST00000381089 GCSHP23434 173 aa10.88□□□□□ -0.67
VCX3A-201ENST00000381089 SRIP30626 198 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms