RNA–Protein interactions for RNA: ENST00000376724.6

TRIM40-206, Transcript of tripartite motif containing 40, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TRIM40, Length 2,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-206ENST00000376724 DEFB1P60022 68 aa9.8□□□□□ -0.84
TRIM40-206ENST00000376724 PRR31Q5SQ13 230 aa9.8□□□□□ -0.84
TRIM40-206ENST00000376724 FAM162BQ5T6X4 162 aa9.8□□□□□ -0.84
TRIM40-206ENST00000376724 TMEM78Q5T7P6 136 aa9.8□□□□□ -0.84
TRIM40-206ENST00000376724 WDR73Q6P4I2 378 aa9.8□□□□□ -0.84
TRIM40-206ENST00000376724 TMEM136Q6ZRR5 245 aa9.8□□□□□ -0.84
TRIM40-206ENST00000376724 C11orf44Q8N8P7 122 aa9.8□□□□□ -0.84
TRIM40-206ENST00000376724 MRPL53Q96EL3 112 aaKnown RBP9.8□□□□□ -0.84
TRIM40-206ENST00000376724 DUX3Q96PT4 197 aa9.8□□□□□ -0.84
TRIM40-206ENST00000376724 NAGKQ9UJ70 344 aa9.8□□□□□ -0.84
TRIM40-206ENST00000376724 SOCS3O14543 225 aa9.79□□□□□ -0.84
TRIM40-206ENST00000376724 SLURP1P55000 103 aa9.79□□□□□ -0.84
TRIM40-206ENST00000376724 SCGB2A2Q13296 93 aa9.79□□□□□ -0.84
TRIM40-206ENST00000376724 KIAA1644Q3SXP7 199 aa9.79□□□□□ -0.84
TRIM40-206ENST00000376724 TPPP3Q9BW30 176 aa9.79□□□□□ -0.84
TRIM40-206ENST00000376724 NOTCH2Q04721 2471 aa9.79□□□□□ -0.84
TRIM40-206ENST00000376724 GRIFINA4D1Z8 144 aa9.78□□□□□ -0.84
TRIM40-206ENST00000376724 TFPI2P48307 235 aa9.78□□□□□ -0.84
TRIM40-206ENST00000376724 OR11H1Q8NG94 326 aa9.78□□□□□ -0.84
TRIM40-206ENST00000376724 GFRA4Q9GZZ7 299 aa9.78□□□□□ -0.84
TRIM40-206ENST00000376724 CLEC5AQ9NY25 188 aa9.78□□□□□ -0.84
TRIM40-206ENST00000376724 TMEM189A5PLL7 270 aa9.78□□□□□ -0.84
TRIM40-206ENST00000376724 ZNF138P52744 262 aa9.78□□□□□ -0.84
TRIM40-206ENST00000376724 RBPMS2Q6ZRY4 209 aaKnown RBP9.78□□□□□ -0.84
TRIM40-206ENST00000376724 ZNF418Q8TF45 676 aaPredicted RBP9.78□□□□□ -0.84
TRIM40-206ENST00000376724 MIEN1Q9BRT3 115 aa9.78□□□□□ -0.84
TRIM40-206ENST00000376724 A0A1B0GUS0 222 aa9.77□□□□□ -0.85
TRIM40-206ENST00000376724 MT-ND6P03923 174 aa9.77□□□□□ -0.85
TRIM40-206ENST00000376724 BMI1P35226 326 aa9.77□□□□□ -0.85
TRIM40-206ENST00000376724 COX19Q49B96 90 aa9.77□□□□□ -0.85
TRIM40-206ENST00000376724 GDF5OSQ5U4N7 250 aa9.77□□□□□ -0.85
TRIM40-206ENST00000376724 KLHL30-AS1Q8NEE0 82 aa9.77□□□□□ -0.85
TRIM40-206ENST00000376724 DPF1Q92782 380 aa9.77□□□□□ -0.85
TRIM40-206ENST00000376724 C20orf144Q9BQM9 153 aa9.77□□□□□ -0.85
TRIM40-206ENST00000376724 SSBP4Q9BWG4 385 aaPredicted RBP9.77□□□□□ -0.85
TRIM40-206ENST00000376724 F6UB75 175 aa9.77□□□□□ -0.85
TRIM40-206ENST00000376724 LINC01619G3V211 115 aa9.77□□□□□ -0.85
TRIM40-206ENST00000376724 LGALS9O00182 355 aa9.77□□□□□ -0.85
TRIM40-206ENST00000376724 HLA-DQA1P01909 254 aa9.77□□□□□ -0.85
TRIM40-206ENST00000376724 RNASE1P07998 156 aaKnown RBP9.77□□□□□ -0.85
TRIM40-206ENST00000376724 C9orf47Q6ZRZ4 202 aa9.77□□□□□ -0.85
TRIM40-206ENST00000376724 COX8CQ7Z4L0 72 aa9.77□□□□□ -0.85
TRIM40-206ENST00000376724 C4orf3Q8WVX3 66 aa9.77□□□□□ -0.85
TRIM40-206ENST00000376724 TMEM160Q9NX00 188 aa9.77□□□□□ -0.85
TRIM40-206ENST00000376724 A0A1W2PRX2 142 aa9.76□□□□□ -0.85
TRIM40-206ENST00000376724 FAM231BA6NCW3 169 aa9.76□□□□□ -0.85
TRIM40-206ENST00000376724 J3KRW8 73 aa9.76□□□□□ -0.85
TRIM40-206ENST00000376724 HAX1O00165 279 aa9.76□□□□□ -0.85
TRIM40-206ENST00000376724 APCSP02743 223 aa9.76□□□□□ -0.85
TRIM40-206ENST00000376724 ORM1P02763 201 aa9.76□□□□□ -0.85
TRIM40-206ENST00000376724 SLAQ13239 276 aa9.76□□□□□ -0.85
TRIM40-206ENST00000376724 KLF5Q13887 457 aaPredicted RBP9.76□□□□□ -0.85
TRIM40-206ENST00000376724 ATP5L2Q7Z4Y8 100 aa9.76□□□□□ -0.85
TRIM40-206ENST00000376724 OR10J6PQ8NGY7 276 aa9.76□□□□□ -0.85
TRIM40-206ENST00000376724 WIPF2Q8TF74 440 aaPredicted RBP9.76□□□□□ -0.85
TRIM40-206ENST00000376724 MTORP42345 2549 aa9.75□□□□□ -0.85
TRIM40-206ENST00000376724 C2orf70A6NJV1 201 aa9.75□□□□□ -0.85
TRIM40-206ENST00000376724 FABP5P3A8MUU1 101 aa9.75□□□□□ -0.85
TRIM40-206ENST00000376724 TCF21O43680 179 aa9.75□□□□□ -0.85
TRIM40-206ENST00000376724 CRISP2P16562 243 aa9.75□□□□□ -0.85
TRIM40-206ENST00000376724 HBBP68871 147 aa9.75□□□□□ -0.85
TRIM40-206ENST00000376724 HIST1H1AQ02539 215 aaPredicted RBP9.75□□□□□ -0.85
TRIM40-206ENST00000376724 RASL11AQ6T310 242 aa9.75□□□□□ -0.85
TRIM40-206ENST00000376724 OR1N2Q8NGR9 330 aa9.75□□□□□ -0.85
TRIM40-206ENST00000376724 MS4A6AQ9H2W1 248 aa9.75□□□□□ -0.85
TRIM40-206ENST00000376724 A0A1B0GXF2 115 aa9.75□□□□□ -0.85
TRIM40-206ENST00000376724 OVOL1O14753 267 aa9.75□□□□□ -0.85
TRIM40-206ENST00000376724 ID1P41134 155 aa9.75□□□□□ -0.85
TRIM40-206ENST00000376724 HILS1P60008 231 aa9.75□□□□□ -0.85
TRIM40-206ENST00000376724 DCANP1Q8TF63 244 aa9.75□□□□□ -0.85
TRIM40-206ENST00000376724 ARMS2P0C7Q2 107 aa9.74□□□□□ -0.85
TRIM40-206ENST00000376724 CD28P10747 220 aa9.74□□□□□ -0.85
TRIM40-206ENST00000376724 FOXA3P55318 350 aaPredicted RBP9.74□□□□□ -0.85
TRIM40-206ENST00000376724 COL5A1-AS1Q5SY13 56 aa9.74□□□□□ -0.85
TRIM40-206ENST00000376724 TMEM256Q8N2U0 113 aa9.74□□□□□ -0.85
TRIM40-206ENST00000376724 LINC01006Q8NI28 216 aa9.74□□□□□ -0.85
TRIM40-206ENST00000376724 HIVEP2P31629 2446 aa9.74□□□□□ -0.85
TRIM40-206ENST00000376724 NF1P21359 2839 aa9.74□□□□□ -0.85
TRIM40-206ENST00000376724 MUC21A0A0G2JKD1 596 aa9.73□□□□□ -0.85
TRIM40-206ENST00000376724 MUC21A0A140T8X8 626 aa9.73□□□□□ -0.85
TRIM40-206ENST00000376724 M0QZ24 198 aa9.73□□□□□ -0.85
TRIM40-206ENST00000376724 RBX1P62877 108 aa9.73□□□□□ -0.85
TRIM40-206ENST00000376724 MUC21Q5SSG8 566 aa9.73□□□□□ -0.85
TRIM40-206ENST00000376724 TEX43Q6ZNM6 134 aa9.73□□□□□ -0.85
TRIM40-206ENST00000376724 LINC00477Q96M19 166 aa9.73□□□□□ -0.85
TRIM40-206ENST00000376724 OTOGQ6ZRI0 2925 aa9.73□□□□□ -0.85
TRIM40-206ENST00000376724 A0A1B0GUT8 65 aa9.73□□□□□ -0.85
TRIM40-206ENST00000376724 ZNF688P0C7X2 276 aa9.73□□□□□ -0.85
TRIM40-206ENST00000376724 SRIP30626 198 aa9.73□□□□□ -0.85
TRIM40-206ENST00000376724 LYZL1Q6UWQ5 148 aa9.73□□□□□ -0.85
TRIM40-206ENST00000376724 ADAMTSL5Q6ZMM2 481 aa9.73□□□□□ -0.85
TRIM40-206ENST00000376724 Q6ZQT7 251 aa9.73□□□□□ -0.85
TRIM40-206ENST00000376724 OR8A1Q8NGG7 326 aa9.73□□□□□ -0.85
TRIM40-206ENST00000376724 DLX4Q92988 240 aaPredicted RBP9.73□□□□□ -0.85
TRIM40-206ENST00000376724 INAFM1C9JVW0 142 aa9.72□□□□□ -0.85
TRIM40-206ENST00000376724 F2Z2F3 143 aa9.72□□□□□ -0.85
TRIM40-206ENST00000376724 PSMG4Q5JS54 123 aa9.72□□□□□ -0.85
TRIM40-206ENST00000376724 BAGE3Q86Y29 109 aa9.72□□□□□ -0.85
TRIM40-206ENST00000376724 BORCS7Q96B45 105 aa9.72□□□□□ -0.85
TRIM40-206ENST00000376724 NUPR1O60356 82 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms