RNA–Protein interactions for RNA: ENST00000374516.7

PHF1-202, Transcript of PHD finger protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHF1, Length 2,330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-202ENST00000374516 GOSR1O95249 250 aa13.11□□□□□ -0.31
PHF1-202ENST00000374516 RAB37Q96AX2 223 aa13.11□□□□□ -0.31
PHF1-202ENST00000374516 PTPN13Q12923 2485 aa13.11□□□□□ -0.31
PHF1-202ENST00000374516 ANKRD17O75179 2603 aaKnown RBP13.11□□□□□ -0.31
PHF1-202ENST00000374516 ZANQ9Y493 2812 aa13.11□□□□□ -0.31
PHF1-202ENST00000374516 TRAV40A0A0B4J280 105 aa13.11□□□□□ -0.31
PHF1-202ENST00000374516 LINC01548A6NM66 108 aa13.11□□□□□ -0.31
PHF1-202ENST00000374516 GNG7O60262 68 aa13.11□□□□□ -0.31
PHF1-202ENST00000374516 FCGR2BP31994 310 aaPredicted RBP13.11□□□□□ -0.31
PHF1-202ENST00000374516 TMEM219Q86XT9 240 aa13.11□□□□□ -0.31
PHF1-202ENST00000374516 PCP2Q8IVA1 136 aa13.11□□□□□ -0.31
PHF1-202ENST00000374516 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.1□□□□□ -0.312e-43■■■□□ 15
PHF1-202ENST00000374516 NDUFS8O00217 210 aa13.1□□□□□ -0.31
PHF1-202ENST00000374516 PRSS57Q6UWY2 283 aa13.1□□□□□ -0.31
PHF1-202ENST00000374516 NEGR1Q7Z3B1 354 aa13.1□□□□□ -0.31
PHF1-202ENST00000374516 RNF125Q96EQ8 232 aa13.1□□□□□ -0.31
PHF1-202ENST00000374516 IL4P05112 153 aa13.1□□□□□ -0.31
PHF1-202ENST00000374516 ECSCRQ19T08 205 aa13.1□□□□□ -0.31
PHF1-202ENST00000374516 BCL6BQ8N143 479 aaPredicted RBP13.1□□□□□ -0.31
PHF1-202ENST00000374516 SH2D1AO60880 128 aa13.09□□□□□ -0.31
PHF1-202ENST00000374516 NMUP48645 174 aa13.09□□□□□ -0.31
PHF1-202ENST00000374516 A0A1W2PPM0 123 aa13.08□□□□□ -0.31
PHF1-202ENST00000374516 F8W735 103 aaPredicted RBP13.08□□□□□ -0.31
PHF1-202ENST00000374516 ATP6V0E1O15342 81 aa13.08□□□□□ -0.31
PHF1-202ENST00000374516 IGHV4-38-2P0DP08 117 aa13.08□□□□□ -0.31
PHF1-202ENST00000374516 CKS2P33552 79 aa13.08□□□□□ -0.31
PHF1-202ENST00000374516 AAMDCQ9H7C9 122 aa13.08□□□□□ -0.31
PHF1-202ENST00000374516 DKK2Q9UBU2 259 aa13.08□□□□□ -0.31
PHF1-202ENST00000374516 IGHV1-69DA0A0B4J2H0 117 aa13.08□□□□□ -0.32
PHF1-202ENST00000374516 TMEM238C9JI98 176 aa13.08□□□□□ -0.32
PHF1-202ENST00000374516 NPYP01303 97 aa13.08□□□□□ -0.32
PHF1-202ENST00000374516 IGHV1-69P01742 117 aa13.08□□□□□ -0.32
PHF1-202ENST00000374516 MFAP4P55083 255 aa13.08□□□□□ -0.32
PHF1-202ENST00000374516 C21orf62Q9NYP8 219 aa13.08□□□□□ -0.32
PHF1-202ENST00000374516 WI2-2373I1.2A0A1W2PRP0 233 aa13.07□□□□□ -0.32
PHF1-202ENST00000374516 SMKR1H3BMG3 65 aa13.07□□□□□ -0.32
PHF1-202ENST00000374516 SPCS1Q9Y6A9 102 aa13.07□□□□□ -0.32
PHF1-202ENST00000374516 CSPG4Q6UVK1 2322 aa13.07□□□□□ -0.32
PHF1-202ENST00000374516 G3V318 75 aa13.07□□□□□ -0.32
PHF1-202ENST00000374516 PDE6HQ13956 83 aa13.07□□□□□ -0.32
PHF1-202ENST00000374516 OR5A1Q8NGJ0 315 aa13.07□□□□□ -0.32
PHF1-202ENST00000374516 TWIST1Q15672 202 aa13.06□□□□□ -0.32
PHF1-202ENST00000374516 WFDC3Q8IUB2 231 aa13.06□□□□□ -0.32
PHF1-202ENST00000374516 IGHV3-35A0A0C4DH35 117 aa13.06□□□□□ -0.32
PHF1-202ENST00000374516 MSMBP08118 114 aa13.06□□□□□ -0.32
PHF1-202ENST00000374516 COX6B1P14854 86 aa13.06□□□□□ -0.32
PHF1-202ENST00000374516 NPFFR1Q9GZQ6 430 aa13.06□□□□□ -0.32
PHF1-202ENST00000374516 COX8CQ7Z4L0 72 aa13.05□□□□□ -0.32
PHF1-202ENST00000374516 PIFOQ8TCI5 191 aa13.05□□□□□ -0.32
PHF1-202ENST00000374516 IGHV3OR16-8A0A075B7F1 116 aa13.04□□□□□ -0.32
PHF1-202ENST00000374516 SMIM13P0DJ93 91 aa13.04□□□□□ -0.32
PHF1-202ENST00000374516 FABP2P12104 132 aa13.04□□□□□ -0.32
PHF1-202ENST00000374516 C5orf56Q8N8D9 126 aa13.04□□□□□ -0.32
PHF1-202ENST00000374516 PRR25Q96S07 402 aa13.04□□□□□ -0.32
PHF1-202ENST00000374516 HIF1ANQ9NWT6 349 aa13.04□□□□□ -0.32
PHF1-202ENST00000374516 LINC00527Q9UJ94 153 aa13.04□□□□□ -0.32
PHF1-202ENST00000374516 CHD6Q8TD26 2715 aa13.04□□□□□ -0.32
PHF1-202ENST00000374516 IGKV2-40A0A087WW87 121 aaPredicted RBP13.04□□□□□ -0.32
PHF1-202ENST00000374516 IGKV2D-40P01614 121 aaPredicted RBP13.04□□□□□ -0.32
PHF1-202ENST00000374516 C15orf32Q32M92 178 aa13.04□□□□□ -0.32
PHF1-202ENST00000374516 SAMD5Q5TGI4 173 aa13.04□□□□□ -0.32
PHF1-202ENST00000374516 C18orf15Q96N68 181 aa13.04□□□□□ -0.32
PHF1-202ENST00000374516 CTSGP08311 255 aa13.03□□□□□ -0.32
PHF1-202ENST00000374516 LY6EQ16553 131 aa13.03□□□□□ -0.32
PHF1-202ENST00000374516 TM4SF20Q53R12 229 aa13.03□□□□□ -0.32
PHF1-202ENST00000374516 S100A7AQ86SG5 101 aa13.03□□□□□ -0.32
PHF1-202ENST00000374516 ZNF575Q86XF7 245 aa13.03□□□□□ -0.32
PHF1-202ENST00000374516 HHLA3Q9XRX5 114 aa13.03□□□□□ -0.32
PHF1-202ENST00000374516 NAV2Q8IVL1 2488 aa13.03□□□□□ -0.32
PHF1-202ENST00000374516 AVPP01185 164 aa13.02□□□□□ -0.32
PHF1-202ENST00000374516 MAPK1IP1LQ8NDC0 245 aa13.02□□□□□ -0.32
PHF1-202ENST00000374516 FAM110DQ8TAY7 271 aaPredicted RBP13.02□□□□□ -0.32
PHF1-202ENST00000374516 IGKV2D-26A0A0A0MRZ7 120 aa13.02□□□□□ -0.33
PHF1-202ENST00000374516 FBLL1A6NHQ2 334 aaKnown RBP13.02□□□□□ -0.33
PHF1-202ENST00000374516 IGLC6P0CF74 106 aa13.02□□□□□ -0.33
PHF1-202ENST00000374516 ZNF80P51504 273 aaPredicted RBP13.02□□□□□ -0.33
PHF1-202ENST00000374516 ZMAT4Q9H898 229 aa13.02□□□□□ -0.33
PHF1-202ENST00000374516 SMIM17P0DL12 118 aa13.01□□□□□ -0.33
PHF1-202ENST00000374516 PSMG4Q5JS54 123 aa13.01□□□□□ -0.33
PHF1-202ENST00000374516 RNF185Q96GF1 192 aa13.01□□□□□ -0.33
PHF1-202ENST00000374516 ZNF48Q96MX3 618 aaPredicted RBP13.01□□□□□ -0.33
PHF1-202ENST00000374516 MSRB1Q9NZV6 116 aa13.01□□□□□ -0.33
PHF1-202ENST00000374516 NBPF19A0A087WUL8 3843 aa13.01□□□□□ -0.33
PHF1-202ENST00000374516 LINC01546A6NGU7 62 aa13.01□□□□□ -0.33
PHF1-202ENST00000374516 GCSHP23434 173 aa13.01□□□□□ -0.33
PHF1-202ENST00000374516 BMI1P35226 326 aa13.01□□□□□ -0.33
PHF1-202ENST00000374516 LEPP41159 167 aa13.01□□□□□ -0.33
PHF1-202ENST00000374516 KRTAP10-9P60411 292 aa13.01□□□□□ -0.33
PHF1-202ENST00000374516 MAP1LC3AQ9H492 121 aa13.01□□□□□ -0.33
PHF1-202ENST00000374516 HIGD1BQ9P298 99 aa13.01□□□□□ -0.33
PHF1-202ENST00000374516 B4DSR2 109 aa13□□□□□ -0.33
PHF1-202ENST00000374516 GAS8-AS1O95177 125 aa13□□□□□ -0.33
PHF1-202ENST00000374516 CLEC3BP05452 202 aa13□□□□□ -0.33
PHF1-202ENST00000374516 FCER1GP30273 86 aa13□□□□□ -0.33
PHF1-202ENST00000374516 FXYD2P54710 66 aa13□□□□□ -0.33
PHF1-202ENST00000374516 ODF1Q14990 250 aa13□□□□□ -0.33
PHF1-202ENST00000374516 MOB4Q9Y3A3 225 aa13□□□□□ -0.33
PHF1-202ENST00000374516 Q8TAT8 98 aa13□□□□□ -0.33
PHF1-202ENST00000374516 VGLL1Q99990 258 aa13□□□□□ -0.33
PHF1-202ENST00000374516 TTTY13Q9BZ97 58 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms