RNA–Protein interactions for RNA: ENST00000372857.7

PABPC4-202, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

TSL 1 (best) BASIC

Gene PABPC4, Length 3,048 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-202ENST00000372857 GFRALQ6UXV0 394 aa12.33□□□□□ -0.44
PABPC4-202ENST00000372857 C3orf36Q3SXR2 165 aa12.33□□□□□ -0.44
PABPC4-202ENST00000372857 HIST1H4GQ99525 98 aa12.33□□□□□ -0.44
PABPC4-202ENST00000372857 SPATA25Q9BR10 227 aa12.33□□□□□ -0.44
PABPC4-202ENST00000372857 FOXC1Q12948 553 aa12.32□□□□□ -0.44
PABPC4-202ENST00000372857 RPEQ96AT9 228 aa12.32□□□□□ -0.44
PABPC4-202ENST00000372857 FAM57AQ8TBR7 257 aa12.32□□□□□ -0.44
PABPC4-202ENST00000372857 BUB1B-PAK6H3BSN5 160 aa12.32□□□□□ -0.44
PABPC4-202ENST00000372857 TNFRSF13BO14836 293 aaPredicted RBP12.32□□□□□ -0.44
PABPC4-202ENST00000372857 NUP37Q8NFH4 326 aa12.32□□□□□ -0.44
PABPC4-202ENST00000372857 MRAP2Q96G30 205 aa12.32□□□□□ -0.44
PABPC4-202ENST00000372857 NXT2Q9NPJ8 142 aaKnown RBP12.32□□□□□ -0.44
PABPC4-202ENST00000372857 SHISA9B4DS77 424 aa12.31□□□□□ -0.44
PABPC4-202ENST00000372857 NDUFA3O95167 84 aa12.31□□□□□ -0.44
PABPC4-202ENST00000372857 IGLV1-47P01700 117 aa12.31□□□□□ -0.44
PABPC4-202ENST00000372857 THBDP07204 575 aa12.31□□□□□ -0.44
PABPC4-202ENST00000372857 GAGE13Q4V321 117 aa12.31□□□□□ -0.44
PABPC4-202ENST00000372857 LY6HO94772 140 aa12.31□□□□□ -0.44
PABPC4-202ENST00000372857 PDE6HQ13956 83 aa12.31□□□□□ -0.44
PABPC4-202ENST00000372857 IGHV3-35A0A0C4DH35 117 aa12.3□□□□□ -0.44
PABPC4-202ENST00000372857 ERCC8Q13216 396 aa12.3□□□□□ -0.44
PABPC4-202ENST00000372857 TCTEX1D4Q5JR98 221 aa12.3□□□□□ -0.44
PABPC4-202ENST00000372857 TRAV26-2A0A0B4J265 109 aa12.3□□□□□ -0.44
PABPC4-202ENST00000372857 ATP5LO75964 103 aa12.29□□□□□ -0.44
PABPC4-202ENST00000372857 HERV-K104P63124 156 aa12.29□□□□□ -0.44
PABPC4-202ENST00000372857 IGFL3Q6UXB1 125 aa12.29□□□□□ -0.44
PABPC4-202ENST00000372857 DTX2Q86UW9 622 aa12.29□□□□□ -0.44
PABPC4-202ENST00000372857 TTC9CQ8N5M4 171 aa12.29□□□□□ -0.44
PABPC4-202ENST00000372857 DYNLRB1Q9NP97 96 aa12.29□□□□□ -0.44
PABPC4-202ENST00000372857 C20orf78Q9BR46 151 aa12.29□□□□□ -0.44
PABPC4-202ENST00000372857 A0A1B0GWB2 263 aa12.29□□□□□ -0.44
PABPC4-202ENST00000372857 TRGV3P03979 118 aa12.29□□□□□ -0.44
PABPC4-202ENST00000372857 GATA3P23771 443 aa12.29□□□□□ -0.44
PABPC4-202ENST00000372857 EFNA4P52798 201 aa12.29□□□□□ -0.44
PABPC4-202ENST00000372857 ASCL5Q7RTU5 278 aa12.29□□□□□ -0.44
PABPC4-202ENST00000372857 TIMM23O14925 209 aa12.28□□□□□ -0.44
PABPC4-202ENST00000372857 GRNP28799 593 aaKnown RBP12.28□□□□□ -0.44
PABPC4-202ENST00000372857 RRN3P1Q2M238 152 aa12.28□□□□□ -0.44
PABPC4-202ENST00000372857 SFTA2Q6UW10 78 aa12.28□□□□□ -0.44
PABPC4-202ENST00000372857 Q8NA96 180 aa12.28□□□□□ -0.44
PABPC4-202ENST00000372857 LINC01560Q8TB33 94 aa12.28□□□□□ -0.44
PABPC4-202ENST00000372857 PRO0461Q9UI25 63 aa12.28□□□□□ -0.44
PABPC4-202ENST00000372857 LINC01546A6NGU7 62 aa12.27□□□□□ -0.44
PABPC4-202ENST00000372857 PSMG4Q5JS54 123 aa12.27□□□□□ -0.44
PABPC4-202ENST00000372857 IGHG4P01861 327 aa12.27□□□□□ -0.45
PABPC4-202ENST00000372857 SRSF1Q07955 248 aaKnown RBP eCLIP12.27□□□□□ -0.452e-6■□□□□ 9.9
PABPC4-202ENST00000372857 Q8N8P6 123 aa12.27□□□□□ -0.45
PABPC4-202ENST00000372857 MYOZ3Q8TDC0 251 aa12.27□□□□□ -0.45
PABPC4-202ENST00000372857 DYNAPQ8N1N2 210 aa12.26□□□□□ -0.45
PABPC4-202ENST00000372857 MRPL16Q9NX20 251 aaKnown RBP12.26□□□□□ -0.45
PABPC4-202ENST00000372857 CYSLTR1Q9Y271 337 aa12.26□□□□□ -0.45
PABPC4-202ENST00000372857 UFC1Q9Y3C8 167 aa12.26□□□□□ -0.45
PABPC4-202ENST00000372857 SMAD5-AS1Q9Y6J3 95 aa12.26□□□□□ -0.45
PABPC4-202ENST00000372857 IGLV2-18A0A075B6J9 118 aa12.26□□□□□ -0.45
PABPC4-202ENST00000372857 FABP5P3A8MUU1 101 aa12.26□□□□□ -0.45
PABPC4-202ENST00000372857 PRAC2D3DTV9 90 aa12.26□□□□□ -0.45
PABPC4-202ENST00000372857 APOMO95445 188 aa12.26□□□□□ -0.45
PABPC4-202ENST00000372857 COX8CQ7Z4L0 72 aa12.26□□□□□ -0.45
PABPC4-202ENST00000372857 TMEM190Q8WZ59 177 aa12.26□□□□□ -0.45
PABPC4-202ENST00000372857 KLK15Q9H2R5 256 aa12.26□□□□□ -0.45
PABPC4-202ENST00000372857 FAM90A27PA6NNH2 459 aa12.25□□□□□ -0.45
PABPC4-202ENST00000372857 NCBP2LA6PVI3 153 aaKnown RBP12.25□□□□□ -0.45
PABPC4-202ENST00000372857 RPL7P18124 248 aaKnown RBP12.25□□□□□ -0.45
PABPC4-202ENST00000372857 ZNF502Q8TBZ5 544 aa12.25□□□□□ -0.45
PABPC4-202ENST00000372857 CFHR4Q92496 578 aa12.25□□□□□ -0.45
PABPC4-202ENST00000372857 RNASE6Q93091 150 aaKnown RBP12.25□□□□□ -0.45
PABPC4-202ENST00000372857 CELSR1Q9NYQ6 3014 aa12.25□□□□□ -0.45
PABPC4-202ENST00000372857 MFAP4P55083 255 aa12.25□□□□□ -0.45
PABPC4-202ENST00000372857 RNF182Q8N6D2 247 aa12.25□□□□□ -0.45
PABPC4-202ENST00000372857 RAB1BQ9H0U4 201 aa12.25□□□□□ -0.45
PABPC4-202ENST00000372857 KAAG1Q9UBP8 84 aa12.25□□□□□ -0.45
PABPC4-202ENST00000372857 HRNRQ86YZ3 2850 aaPredicted RBP12.25□□□□□ -0.45
PABPC4-202ENST00000372857 F8W735 103 aaPredicted RBP12.24□□□□□ -0.45
PABPC4-202ENST00000372857 IL17RELQ6ZVW7 336 aa12.24□□□□□ -0.45
PABPC4-202ENST00000372857 LAGE3Q14657 143 aa12.24□□□□□ -0.45
PABPC4-202ENST00000372857 FANCD2OSQ96PS1 177 aa12.24□□□□□ -0.45
PABPC4-202ENST00000372857 CNFNQ9BYD5 112 aa12.24□□□□□ -0.45
PABPC4-202ENST00000372857 ZFHX3Q15911 3703 aa12.24□□□□□ -0.45
PABPC4-202ENST00000372857 TRBV7-3A0A075B6L6 115 aa12.24□□□□□ -0.45
PABPC4-202ENST00000372857 A0A087WX48 190 aa12.24□□□□□ -0.45
PABPC4-202ENST00000372857 E7EQL1 145 aa12.24□□□□□ -0.45
PABPC4-202ENST00000372857 CLEC3BP05452 202 aa12.24□□□□□ -0.45
PABPC4-202ENST00000372857 HES1Q14469 280 aa12.24□□□□□ -0.45
PABPC4-202ENST00000372857 TAL2Q16559 108 aa12.24□□□□□ -0.45
PABPC4-202ENST00000372857 C5orf64Q2M2E5 130 aa12.24□□□□□ -0.45
PABPC4-202ENST00000372857 PSMG3-AS1Q96PY0 264 aa12.24□□□□□ -0.45
PABPC4-202ENST00000372857 PGPEP1Q9NXJ5 209 aa12.24□□□□□ -0.45
PABPC4-202ENST00000372857 SPG11Q96JI7 2443 aa12.23□□□□□ -0.45
PABPC4-202ENST00000372857 SYT8Q8NBV8 401 aa12.23□□□□□ -0.45
PABPC4-202ENST00000372857 SPINK8P0C7L1 97 aa12.23□□□□□ -0.45
PABPC4-202ENST00000372857 NBR2O15453 112 aa12.22□□□□□ -0.45
PABPC4-202ENST00000372857 HLA-DRB4P13762 266 aa12.22□□□□□ -0.45
PABPC4-202ENST00000372857 MORN3Q6PF18 240 aaPredicted RBP12.22□□□□□ -0.45
PABPC4-202ENST00000372857 C21orf62Q9NYP8 219 aa12.22□□□□□ -0.45
PABPC4-202ENST00000372857 C11orf21Q9P2W6 132 aa12.22□□□□□ -0.45
PABPC4-202ENST00000372857 ONECUT1Q9UBC0 465 aa12.22□□□□□ -0.45
PABPC4-202ENST00000372857 HLA-DRB4X5D2U9 266 aa12.22□□□□□ -0.45
PABPC4-202ENST00000372857 IGHV3-66A0A0C4DH42 116 aa12.22□□□□□ -0.45
PABPC4-202ENST00000372857 Q6ZQT7 251 aa12.22□□□□□ -0.45
PABPC4-202ENST00000372857 IGKV3D-20A0A0C4DH25 116 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms