RNA–Protein interactions for RNA: ENST00000372547.5

SNX21-205, Transcript of sorting nexin family member 21, humanhuman

TSL 1 (best)

Gene SNX21, Length 2,794 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX21-205ENST00000372547 TM2D2Q9BX73 214 aa9.31□□□□□ -0.92
SNX21-205ENST00000372547 A0A0G2JNJ9 132 aa9.3□□□□□ -0.92
SNX21-205ENST00000372547 ATP5LO75964 103 aa9.3□□□□□ -0.92
SNX21-205ENST00000372547 THBDP07204 575 aa9.3□□□□□ -0.92
SNX21-205ENST00000372547 CKS1BP61024 79 aa9.3□□□□□ -0.92
SNX21-205ENST00000372547 KLRD1Q13241 179 aa9.3□□□□□ -0.92
SNX21-205ENST00000372547 SCGB2A2Q13296 93 aa9.3□□□□□ -0.92
SNX21-205ENST00000372547 DEFB104AQ8WTQ1 72 aa9.3□□□□□ -0.92
SNX21-205ENST00000372547 CFHR4Q92496 578 aa9.3□□□□□ -0.92
SNX21-205ENST00000372547 ZMAT4Q9H898 229 aa9.3□□□□□ -0.92
SNX21-205ENST00000372547 Q9UFV3 132 aa9.3□□□□□ -0.92
SNX21-205ENST00000372547 CUL9Q8IWT3 2517 aa9.3□□□□□ -0.92
SNX21-205ENST00000372547 NBR2O15453 112 aa9.3□□□□□ -0.92
SNX21-205ENST00000372547 C21orf62Q9NYP8 219 aa9.3□□□□□ -0.92
SNX21-205ENST00000372547 VSTM5A8MXK1 200 aa9.29□□□□□ -0.92
SNX21-205ENST00000372547 Q6ZQT7 251 aa9.29□□□□□ -0.92
SNX21-205ENST00000372547 ZNF575Q86XF7 245 aa9.29□□□□□ -0.92
SNX21-205ENST00000372547 C20orf78Q9BR46 151 aa9.29□□□□□ -0.92
SNX21-205ENST00000372547 RAB1BQ9H0U4 201 aa9.29□□□□□ -0.92
SNX21-205ENST00000372547 SMAD5-AS1Q9Y6J3 95 aa9.29□□□□□ -0.92
SNX21-205ENST00000372547 BSNQ9UPA5 3926 aa9.29□□□□□ -0.92
SNX21-205ENST00000372547 LY6HO94772 140 aa9.29□□□□□ -0.92
SNX21-205ENST00000372547 MUC6Q6W4X9 2439 aa9.29□□□□□ -0.92
SNX21-205ENST00000372547 Q8N8P6 123 aa9.29□□□□□ -0.92
SNX21-205ENST00000372547 FANCD2OSQ96PS1 177 aa9.29□□□□□ -0.92
SNX21-205ENST00000372547 LOC107984156A0A0G2JMH3 177 aa9.28□□□□□ -0.92
SNX21-205ENST00000372547 E7EQL1 145 aa9.28□□□□□ -0.92
SNX21-205ENST00000372547 NDUFS8O00217 210 aa9.28□□□□□ -0.92
SNX21-205ENST00000372547 APOMO95445 188 aa9.28□□□□□ -0.92
SNX21-205ENST00000372547 IGHG4P01861 327 aa9.28□□□□□ -0.92
SNX21-205ENST00000372547 CEACAM3P40198 252 aa9.28□□□□□ -0.92
SNX21-205ENST00000372547 LAGE3Q14657 143 aa9.28□□□□□ -0.92
SNX21-205ENST00000372547 PIP4P1Q86T03 277 aa9.28□□□□□ -0.92
SNX21-205ENST00000372547 ARL17AQ8IVW1 177 aa9.28□□□□□ -0.92
SNX21-205ENST00000372547 ZNF418Q8TF45 676 aaPredicted RBP9.28□□□□□ -0.92
SNX21-205ENST00000372547 KAAG1Q9UBP8 84 aa9.28□□□□□ -0.92
SNX21-205ENST00000372547 SPANXN1Q5VSR9 72 aa9.28□□□□□ -0.92
SNX21-205ENST00000372547 F8W735 103 aaPredicted RBP9.27□□□□□ -0.93
SNX21-205ENST00000372547 TGFAP01135 160 aa9.27□□□□□ -0.93
SNX21-205ENST00000372547 PIFOQ8TCI5 191 aa9.27□□□□□ -0.93
SNX21-205ENST00000372547 MRPL16Q9NX20 251 aaKnown RBP9.27□□□□□ -0.93
SNX21-205ENST00000372547 PGPEP1Q9NXJ5 209 aa9.27□□□□□ -0.93
SNX21-205ENST00000372547 SMPXQ9UHP9 88 aa9.27□□□□□ -0.93
SNX21-205ENST00000372547 OR11H12B2RN74 326 aa9.27□□□□□ -0.93
SNX21-205ENST00000372547 NDPQ00604 133 aa9.27□□□□□ -0.93
SNX21-205ENST00000372547 RRN3P1Q2M238 152 aa9.27□□□□□ -0.93
SNX21-205ENST00000372547 OR11H1Q8NG94 326 aa9.27□□□□□ -0.93
SNX21-205ENST00000372547 OR11H2Q8NH07 326 aa9.27□□□□□ -0.93
SNX21-205ENST00000372547 C11orf21Q9P2W6 132 aa9.27□□□□□ -0.93
SNX21-205ENST00000372547 SPTBN1Q01082 2364 aaKnown RBP9.27□□□□□ -0.93
SNX21-205ENST00000372547 IGKV3D-20A0A0C4DH25 116 aa9.26□□□□□ -0.93
SNX21-205ENST00000372547 SHISA9B4DS77 424 aa9.26□□□□□ -0.93
SNX21-205ENST00000372547 SCGB1A1P11684 91 aa9.26□□□□□ -0.93
SNX21-205ENST00000372547 FAM57AQ8TBR7 257 aa9.26□□□□□ -0.93
SNX21-205ENST00000372547 NBASA2RRP1 2371 aa9.26□□□□□ -0.93
SNX21-205ENST00000372547 A0A087WX48 190 aa9.26□□□□□ -0.93
SNX21-205ENST00000372547 PSMB2P49721 201 aa9.26□□□□□ -0.93
SNX21-205ENST00000372547 SCGB1D4Q6XE38 83 aa9.26□□□□□ -0.93
SNX21-205ENST00000372547 SYT8Q8NBV8 401 aa9.26□□□□□ -0.93
SNX21-205ENST00000372547 HIF1ANQ9NWT6 349 aa9.26□□□□□ -0.93
SNX21-205ENST00000372547 IGLV11-55A0A075B6I3 123 aa9.25□□□□□ -0.93
SNX21-205ENST00000372547 HOXA3O43365 443 aaPredicted RBP9.25□□□□□ -0.93
SNX21-205ENST00000372547 PTH2Q96A98 100 aa9.25□□□□□ -0.93
SNX21-205ENST00000372547 VKORC1Q9BQB6 163 aa9.25□□□□□ -0.93
SNX21-205ENST00000372547 SPATA25Q9BR10 227 aa9.25□□□□□ -0.93
SNX21-205ENST00000372547 TRAV26-1A0A087WT03 109 aa9.25□□□□□ -0.93
SNX21-205ENST00000372547 CTSGP08311 255 aa9.25□□□□□ -0.93
SNX21-205ENST00000372547 GLMPQ8WWB7 406 aa9.25□□□□□ -0.93
SNX21-205ENST00000372547 DPM3Q9P2X0 92 aa9.25□□□□□ -0.93
SNX21-205ENST00000372547 IGLV2-18A0A075B6J9 118 aa9.24□□□□□ -0.93
SNX21-205ENST00000372547 H3BVH4 76 aa9.24□□□□□ -0.93
SNX21-205ENST00000372547 SRSF9Q13242 221 aaKnown RBP eCLIP9.24□□□□□ -0.93
SNX21-205ENST00000372547 C5orf64Q2M2E5 130 aa9.24□□□□□ -0.93
SNX21-205ENST00000372547 LINC01549A6NIU2 74 aa9.24□□□□□ -0.93
SNX21-205ENST00000372547 HLA-DRB4P13762 266 aa9.24□□□□□ -0.93
SNX21-205ENST00000372547 SRSF1Q07955 248 aaKnown RBP eCLIP9.24□□□□□ -0.93
SNX21-205ENST00000372547 PSMG4Q5JS54 123 aa9.24□□□□□ -0.93
SNX21-205ENST00000372547 SCGB3A1Q96QR1 104 aa9.24□□□□□ -0.93
SNX21-205ENST00000372547 HLA-DRB4X5D2U9 266 aa9.24□□□□□ -0.93
SNX21-205ENST00000372547 SPTA1P02549 2419 aa9.24□□□□□ -0.93
SNX21-205ENST00000372547 MYMXA0A1B0GTQ4 84 aa9.24□□□□□ -0.93
SNX21-205ENST00000372547 M0R381 172 aa9.24□□□□□ -0.93
SNX21-205ENST00000372547 EMP1P54849 157 aa9.24□□□□□ -0.93
SNX21-205ENST00000372547 ZNF502Q8TBZ5 544 aa9.24□□□□□ -0.93
SNX21-205ENST00000372547 RAXQ9Y2V3 346 aa9.24□□□□□ -0.93
SNX21-205ENST00000372547 LY6LH3BQJ8 138 aa9.23□□□□□ -0.93
SNX21-205ENST00000372547 PLNP26678 52 aa9.23□□□□□ -0.93
SNX21-205ENST00000372547 ECSCRQ19T08 205 aa9.23□□□□□ -0.93
SNX21-205ENST00000372547 Q6ZS92 163 aa9.23□□□□□ -0.93
SNX21-205ENST00000372547 NRACQ8N912 160 aa9.23□□□□□ -0.93
SNX21-205ENST00000372547 SRSF8Q9BRL6 282 aaKnown RBP9.23□□□□□ -0.93
SNX21-205ENST00000372547 AGPAT4-IT1Q9H0P7 198 aa9.23□□□□□ -0.93
SNX21-205ENST00000372547 GEMIN7Q9H840 131 aaKnown RBP9.23□□□□□ -0.93
SNX21-205ENST00000372547 H7C1H1 209 aa9.23□□□□□ -0.93
SNX21-205ENST00000372547 LINC01559Q495D7 138 aa9.23□□□□□ -0.93
SNX21-205ENST00000372547 TMEM78Q5T7P6 136 aa9.23□□□□□ -0.93
SNX21-205ENST00000372547 ZFP2Q6ZN57 461 aa9.23□□□□□ -0.93
SNX21-205ENST00000372547 CNFNQ9BYD5 112 aa9.23□□□□□ -0.93
SNX21-205ENST00000372547 PRO0461Q9UI25 63 aa9.23□□□□□ -0.93
SNX21-205ENST00000372547 TRBV7-3A0A075B6L6 115 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms