RNA–Protein interactions for RNA: ENST00000372067.7

VEGFA-205, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 3,535 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-205ENST00000372067 OR5A1Q8NGJ0 315 aa13.3□□□□□ -0.28
VEGFA-205ENST00000372067 SIGLEC15Q6ZMC9 328 aa13.3□□□□□ -0.28
VEGFA-205ENST00000372067 H3BUX3 64 aa13.3□□□□□ -0.28
VEGFA-205ENST00000372067 CTSGP08311 255 aa13.3□□□□□ -0.28
VEGFA-205ENST00000372067 RIGQ13278 110 aa13.3□□□□□ -0.28
VEGFA-205ENST00000372067 WFDC2Q14508 124 aa13.29□□□□□ -0.28
VEGFA-205ENST00000372067 SH2D6Q7Z4S9 175 aa13.29□□□□□ -0.28
VEGFA-205ENST00000372067 MRPL16Q9NX20 251 aaKnown RBP13.29□□□□□ -0.28
VEGFA-205ENST00000372067 TNFRSF18Q9Y5U5 241 aa13.29□□□□□ -0.28
VEGFA-205ENST00000372067 A0A1B0GW15 77 aa13.29□□□□□ -0.28
VEGFA-205ENST00000372067 ID1P41134 155 aa13.29□□□□□ -0.28
VEGFA-205ENST00000372067 METTL26Q96S19 204 aa13.29□□□□□ -0.28
VEGFA-205ENST00000372067 KLF12Q9Y4X4 402 aa13.29□□□□□ -0.28
VEGFA-205ENST00000372067 FAM110DQ8TAY7 271 aaPredicted RBP13.29□□□□□ -0.28
VEGFA-205ENST00000372067 ZNF462Q96JM2 2506 aa13.28□□□□□ -0.28
VEGFA-205ENST00000372067 IGHV4-30-2A0A087WSY4 118 aa13.28□□□□□ -0.28
VEGFA-205ENST00000372067 ZNF138P52744 262 aa13.28□□□□□ -0.28
VEGFA-205ENST00000372067 BOD1L2Q8IYS8 172 aa13.28□□□□□ -0.28
VEGFA-205ENST00000372067 RNF182Q8N6D2 247 aa13.28□□□□□ -0.28
VEGFA-205ENST00000372067 GTSF1Q8WW33 167 aa13.28□□□□□ -0.28
VEGFA-205ENST00000372067 TRAV41A0A0B4J266 112 aa13.28□□□□□ -0.28
VEGFA-205ENST00000372067 A0A1B0GUT8 65 aa13.28□□□□□ -0.28
VEGFA-205ENST00000372067 IGHV4-38-2P0DP08 117 aa13.28□□□□□ -0.28
VEGFA-205ENST00000372067 DCHS2Q6V1P9 2916 aa13.28□□□□□ -0.28
VEGFA-205ENST00000372067 CENPEQ02224 2701 aa13.27□□□□□ -0.28
VEGFA-205ENST00000372067 IGHV1-69DA0A0B4J2H0 117 aa13.27□□□□□ -0.28
VEGFA-205ENST00000372067 LOC389332A0A1B0GUA5 103 aa13.27□□□□□ -0.28
VEGFA-205ENST00000372067 IGHV1-69P01742 117 aa13.27□□□□□ -0.28
VEGFA-205ENST00000372067 SMIM20Q8N5G0 67 aa13.27□□□□□ -0.28
VEGFA-205ENST00000372067 MOB4Q9Y3A3 225 aa13.27□□□□□ -0.28
VEGFA-205ENST00000372067 WI2-2373I1.2A0A1W2PRP0 233 aa13.27□□□□□ -0.28
VEGFA-205ENST00000372067 ARMS2P0C7Q2 107 aa13.27□□□□□ -0.28
VEGFA-205ENST00000372067 FGF6P10767 208 aa13.27□□□□□ -0.28
VEGFA-205ENST00000372067 USP9XQ93008 2570 aaPredicted RBP13.27□□□□□ -0.29
VEGFA-205ENST00000372067 ERCC8Q13216 396 aa13.27□□□□□ -0.29
VEGFA-205ENST00000372067 LCNL1Q6ZST4 164 aa13.27□□□□□ -0.29
VEGFA-205ENST00000372067 COL12A1Q99715 3063 aa13.27□□□□□ -0.29
VEGFA-205ENST00000372067 COX8AP10176 69 aa13.26□□□□□ -0.29
VEGFA-205ENST00000372067 HRNRQ86YZ3 2850 aaPredicted RBP13.26□□□□□ -0.29
VEGFA-205ENST00000372067 PTPN13Q12923 2485 aa13.26□□□□□ -0.29
VEGFA-205ENST00000372067 B5MCH6 92 aa13.26□□□□□ -0.29
VEGFA-205ENST00000372067 Q8N6K4 173 aa13.26□□□□□ -0.29
VEGFA-205ENST00000372067 PRSS3P2Q8NHM4 247 aa13.26□□□□□ -0.29
VEGFA-205ENST00000372067 PPIFP30405 207 aaKnown RBP13.26□□□□□ -0.29
VEGFA-205ENST00000372067 RPL32P62910 135 aaKnown RBP13.26□□□□□ -0.29
VEGFA-205ENST00000372067 ZNF492Q9P255 531 aa13.26□□□□□ -0.29
VEGFA-205ENST00000372067 ERG28Q9UKR5 140 aa13.26□□□□□ -0.29
VEGFA-205ENST00000372067 IGHV1-24A0A0C4DH33 117 aa13.25□□□□□ -0.29
VEGFA-205ENST00000372067 EGR2P11161 476 aaPredicted RBP13.25□□□□□ -0.29
VEGFA-205ENST00000372067 MLST8Q9BVC4 326 aa13.25□□□□□ -0.29
VEGFA-205ENST00000372067 DOPEY1Q5JWR5 2465 aa13.25□□□□□ -0.29
VEGFA-205ENST00000372067 ZNF418Q8TF45 676 aaPredicted RBP13.25□□□□□ -0.29
VEGFA-205ENST00000372067 LYPD1Q8N2G4 141 aa13.25□□□□□ -0.29
VEGFA-205ENST00000372067 C16orf92Q96LL3 132 aa13.25□□□□□ -0.29
VEGFA-205ENST00000372067 VGLL1Q99990 258 aa13.25□□□□□ -0.29
VEGFA-205ENST00000372067 C20orf78Q9BR46 151 aa13.25□□□□□ -0.29
VEGFA-205ENST00000372067 TLN2Q9Y4G6 2542 aa13.24□□□□□ -0.29
VEGFA-205ENST00000372067 ASH1LQ9NR48 2969 aaKnown RBP13.24□□□□□ -0.29
VEGFA-205ENST00000372067 ARL3P36405 182 aa13.24□□□□□ -0.29
VEGFA-205ENST00000372067 TWIST1Q15672 202 aa13.24□□□□□ -0.29
VEGFA-205ENST00000372067 FA2HQ7L5A8 372 aa13.24□□□□□ -0.29
VEGFA-205ENST00000372067 ATP5L2Q7Z4Y8 100 aa13.24□□□□□ -0.29
VEGFA-205ENST00000372067 NAV2Q8IVL1 2488 aa13.24□□□□□ -0.29
VEGFA-205ENST00000372067 TMEM75Q8N9X5 138 aa13.24□□□□□ -0.29
VEGFA-205ENST00000372067 SH2D1AO60880 128 aa13.23□□□□□ -0.29
VEGFA-205ENST00000372067 COX6B1P14854 86 aa13.23□□□□□ -0.29
VEGFA-205ENST00000372067 EBI3Q14213 229 aa13.23□□□□□ -0.29
VEGFA-205ENST00000372067 TCTAP57738 103 aa13.23□□□□□ -0.29
VEGFA-205ENST00000372067 FHL3Q13643 280 aa13.23□□□□□ -0.29
VEGFA-205ENST00000372067 KLF5Q13887 457 aaPredicted RBP13.23□□□□□ -0.29
VEGFA-205ENST00000372067 ETDBQ3ZM63 59 aa13.23□□□□□ -0.29
VEGFA-205ENST00000372067 MT-ATP8P03928 68 aa13.23□□□□□ -0.29
VEGFA-205ENST00000372067 FAM162BQ5T6X4 162 aa13.23□□□□□ -0.29
VEGFA-205ENST00000372067 RASL11AQ6T310 242 aa13.23□□□□□ -0.29
VEGFA-205ENST00000372067 MTURNQ8N3F0 131 aa13.23□□□□□ -0.29
VEGFA-205ENST00000372067 C19orf71A6NCJ1 209 aa13.22□□□□□ -0.29
VEGFA-205ENST00000372067 ZNF502Q8TBZ5 544 aa13.22□□□□□ -0.29
VEGFA-205ENST00000372067 EPG5Q9HCE0 2579 aa13.22□□□□□ -0.29
VEGFA-205ENST00000372067 F8W735 103 aaPredicted RBP13.22□□□□□ -0.29
VEGFA-205ENST00000372067 TGFAP01135 160 aa13.22□□□□□ -0.29
VEGFA-205ENST00000372067 MSMBP08118 114 aa13.22□□□□□ -0.29
VEGFA-205ENST00000372067 LYZL1Q6UWQ5 148 aa13.22□□□□□ -0.29
VEGFA-205ENST00000372067 WFDC3Q8IUB2 231 aa13.22□□□□□ -0.29
VEGFA-205ENST00000372067 C5orf56Q8N8D9 126 aa13.22□□□□□ -0.29
VEGFA-205ENST00000372067 C10orf105Q8TEF2 133 aa13.22□□□□□ -0.29
VEGFA-205ENST00000372067 CDIP1Q9H305 208 aa13.22□□□□□ -0.29
VEGFA-205ENST00000372067 A6NDN8 102 aa13.22□□□□□ -0.29
VEGFA-205ENST00000372067 PDE6HQ13956 83 aa13.22□□□□□ -0.29
VEGFA-205ENST00000372067 C8orf86Q6ZUL3 223 aa13.21□□□□□ -0.29
VEGFA-205ENST00000372067 IGLV2-11P01706 119 aa13.21□□□□□ -0.29
VEGFA-205ENST00000372067 PAX8Q06710 450 aa13.21□□□□□ -0.29
VEGFA-205ENST00000372067 TMEM78Q5T7P6 136 aa13.21□□□□□ -0.29
VEGFA-205ENST00000372067 SAMD5Q5TGI4 173 aa13.21□□□□□ -0.29
VEGFA-205ENST00000372067 CCDC168Q8NDH2 2452 aa13.21□□□□□ -0.29
VEGFA-205ENST00000372067 ABCA12Q86UK0 2595 aa13.21□□□□□ -0.3
VEGFA-205ENST00000372067 TMEM213A2RRL7 107 aa13.21□□□□□ -0.3
VEGFA-205ENST00000372067 FABP2P12104 132 aa13.21□□□□□ -0.3
VEGFA-205ENST00000372067 OVOL3O00110 214 aa13.2□□□□□ -0.3
VEGFA-205ENST00000372067 APOHP02749 345 aaPredicted RBP13.2□□□□□ -0.3
VEGFA-205ENST00000372067 BLCAPP62952 87 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms