RNA–Protein interactions for RNA: ENST00000370828.3

GPC4-201, Transcript of glypican 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC4, Length 4,960 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4-201ENST00000370828 GTF3C1Q12789 2109 aa10.15□□□□□ -0.78
GPC4-201ENST00000370828 SRRM4A7MD48 611 aaKnown RBP10.15□□□□□ -0.78
GPC4-201ENST00000370828 TIMM21Q9BVV7 248 aa10.15□□□□□ -0.78
GPC4-201ENST00000370828 Q0VFX4 171 aa10.15□□□□□ -0.78
GPC4-201ENST00000370828 C8orf31Q8N9H6 132 aa10.15□□□□□ -0.78
GPC4-201ENST00000370828 UBL5Q9BZL1 73 aa10.15□□□□□ -0.78
GPC4-201ENST00000370828 ZSWIM8A7E2V4 1837 aa10.15□□□□□ -0.78
GPC4-201ENST00000370828 USF3Q68DE3 2245 aa10.15□□□□□ -0.79
GPC4-201ENST00000370828 IL17RELQ6ZVW7 336 aa10.14□□□□□ -0.79
GPC4-201ENST00000370828 DTX2Q86UW9 622 aa10.14□□□□□ -0.79
GPC4-201ENST00000370828 C11orf1Q9H5F2 150 aa10.14□□□□□ -0.79
GPC4-201ENST00000370828 TINCRA0A1B0GVN0 87 aa10.14□□□□□ -0.79
GPC4-201ENST00000370828 NEGR1Q7Z3B1 354 aa10.14□□□□□ -0.79
GPC4-201ENST00000370828 OVOL1O14753 267 aa10.14□□□□□ -0.79
GPC4-201ENST00000370828 LTAP01374 205 aa10.14□□□□□ -0.79
GPC4-201ENST00000370828 C2orf70A6NJV1 201 aa10.13□□□□□ -0.79
GPC4-201ENST00000370828 CXCL5P42830 114 aa10.13□□□□□ -0.79
GPC4-201ENST00000370828 LINC00158P58513 81 aa10.13□□□□□ -0.79
GPC4-201ENST00000370828 PDE6HQ13956 83 aa10.13□□□□□ -0.79
GPC4-201ENST00000370828 PRR25Q96S07 402 aa10.13□□□□□ -0.79
GPC4-201ENST00000370828 CARD19Q96LW7 228 aa10.13□□□□□ -0.79
GPC4-201ENST00000370828 CACNA1BQ00975 2339 aa10.13□□□□□ -0.79
GPC4-201ENST00000370828 LINC01587Q99440 93 aa10.13□□□□□ -0.79
GPC4-201ENST00000370828 PAX8Q06710 450 aa10.12□□□□□ -0.79
GPC4-201ENST00000370828 VPREB3Q9UKI3 123 aa10.12□□□□□ -0.79
GPC4-201ENST00000370828 NDUFC2-KCTD14E9PQ53 114 aa10.12□□□□□ -0.79
GPC4-201ENST00000370828 C15orf65H3BRN8 121 aa10.12□□□□□ -0.79
GPC4-201ENST00000370828 RS1O15537 224 aa10.12□□□□□ -0.79
GPC4-201ENST00000370828 GATA1P15976 413 aaPredicted RBP10.12□□□□□ -0.79
GPC4-201ENST00000370828 Q6ZR03 302 aa10.12□□□□□ -0.79
GPC4-201ENST00000370828 A0A087WX48 190 aa10.12□□□□□ -0.79
GPC4-201ENST00000370828 CRPP02741 224 aa10.12□□□□□ -0.79
GPC4-201ENST00000370828 PLXNA4Q9HCM2 1894 aa10.12□□□□□ -0.79
GPC4-201ENST00000370828 NEU4Q8WWR8 484 aaPredicted RBP10.12□□□□□ -0.79
GPC4-201ENST00000370828 C17orf77Q96MU5 243 aa10.12□□□□□ -0.79
GPC4-201ENST00000370828 TANC1Q9C0D5 1861 aa10.11□□□□□ -0.79
GPC4-201ENST00000370828 HRCT1Q6UXD1 115 aa10.11□□□□□ -0.79
GPC4-201ENST00000370828 FGF23Q9GZV9 251 aaPredicted RBP10.11□□□□□ -0.79
GPC4-201ENST00000370828 TPSG1Q9NRR2 321 aa10.11□□□□□ -0.79
GPC4-201ENST00000370828 GPR179Q6PRD1 2367 aa10.11□□□□□ -0.79
GPC4-201ENST00000370828 ODF3L1Q8IXM7 274 aa10.11□□□□□ -0.79
GPC4-201ENST00000370828 IGF2BP2-AS1Q96M15 143 aa10.11□□□□□ -0.79
GPC4-201ENST00000370828 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.11□□□□□ -0.79
GPC4-201ENST00000370828 TP53TG3Q9ULZ0 132 aa10.11□□□□□ -0.79
GPC4-201ENST00000370828 IGHG2P01859 326 aa10.11□□□□□ -0.79
GPC4-201ENST00000370828 ITLN2Q8WWU7 325 aaPredicted RBP10.11□□□□□ -0.79
GPC4-201ENST00000370828 GTSF1Q8WW33 167 aa10.1□□□□□ -0.79
GPC4-201ENST00000370828 NLRC5Q86WI3 1866 aa10.1□□□□□ -0.79
GPC4-201ENST00000370828 PAX4O43316 350 aa10.1□□□□□ -0.79
GPC4-201ENST00000370828 C17orf58Q2M2W7 97 aa10.1□□□□□ -0.79
GPC4-201ENST00000370828 CHCHD5Q9BSY4 110 aa10.1□□□□□ -0.79
GPC4-201ENST00000370828 SMIM2Q9BVW6 85 aa10.1□□□□□ -0.79
GPC4-201ENST00000370828 PCNX1Q96RV3 2341 aa10.1□□□□□ -0.79
GPC4-201ENST00000370828 A0A0B4J2C4 111 aa10.1□□□□□ -0.79
GPC4-201ENST00000370828 FAM236DA0A1B0GTK5 79 aa10.1□□□□□ -0.79
GPC4-201ENST00000370828 CCDC179H3BU77 68 aa10.1□□□□□ -0.79
GPC4-201ENST00000370828 FAM236CP0DP71 79 aa10.1□□□□□ -0.79
GPC4-201ENST00000370828 LTBRP36941 435 aa10.1□□□□□ -0.79
GPC4-201ENST00000370828 CTRLP40313 264 aa10.1□□□□□ -0.79
GPC4-201ENST00000370828 LYPD2Q6UXB3 125 aa10.1□□□□□ -0.79
GPC4-201ENST00000370828 ZGRF1Q86YA3 2104 aa10.1□□□□□ -0.79
GPC4-201ENST00000370828 RNASE6Q93091 150 aaKnown RBP10.09□□□□□ -0.79
GPC4-201ENST00000370828 LY6G5BQ8NDX9 201 aa10.09□□□□□ -0.79
GPC4-201ENST00000370828 PROK2Q9HC23 129 aa10.09□□□□□ -0.79
GPC4-201ENST00000370828 WDR90Q96KV7 1748 aa10.09□□□□□ -0.79
GPC4-201ENST00000370828 TMEM178BH3BS89 294 aa10.09□□□□□ -0.79
GPC4-201ENST00000370828 TNRC6AQ8NDV7 1962 aaKnown RBP10.09□□□□□ -0.79
GPC4-201ENST00000370828 C9orf139Q6ZV77 190 aa10.08□□□□□ -0.8
GPC4-201ENST00000370828 PRIMA1Q86XR5 153 aa10.08□□□□□ -0.8
GPC4-201ENST00000370828 WFDC11Q8NEX6 87 aa10.08□□□□□ -0.8
GPC4-201ENST00000370828 PHLDA1Q8WV24 401 aaPredicted RBP10.08□□□□□ -0.8
GPC4-201ENST00000370828 NRGNQ92686 78 aa10.08□□□□□ -0.8
GPC4-201ENST00000370828 LINC00477Q96M19 166 aa10.08□□□□□ -0.8
GPC4-201ENST00000370828 BUB1B-PAK6H3BSN5 160 aa10.08□□□□□ -0.8
GPC4-201ENST00000370828 J3QQQ9 107 aa10.08□□□□□ -0.8
GPC4-201ENST00000370828 OXLD1Q5BKU9 147 aa10.08□□□□□ -0.8
GPC4-201ENST00000370828 ADARB2-AS1A8MUL3 147 aa10.08□□□□□ -0.8
GPC4-201ENST00000370828 CFC1BP0CG36 223 aa10.08□□□□□ -0.8
GPC4-201ENST00000370828 CFC1P0CG37 223 aa10.08□□□□□ -0.8
GPC4-201ENST00000370828 LINC00694P0DN24 101 aa10.07□□□□□ -0.8
GPC4-201ENST00000370828 DTX1Q86Y01 620 aa10.07□□□□□ -0.8
GPC4-201ENST00000370828 TMEM105Q8N8V8 129 aa10.07□□□□□ -0.8
GPC4-201ENST00000370828 TMEM14CQ9P0S9 112 aa10.07□□□□□ -0.8
GPC4-201ENST00000370828 EGR2P11161 476 aaPredicted RBP10.07□□□□□ -0.8
GPC4-201ENST00000370828 RNF114Q9Y508 228 aa10.07□□□□□ -0.8
GPC4-201ENST00000370828 Q71RC1 249 aaPredicted RBP10.07□□□□□ -0.8
GPC4-201ENST00000370828 DIAPH2-AS1Q14236 149 aa10.06□□□□□ -0.8
GPC4-201ENST00000370828 THAP8Q8NA92 274 aa10.06□□□□□ -0.8
GPC4-201ENST00000370828 C1orf159Q96HA4 380 aa10.06□□□□□ -0.8
GPC4-201ENST00000370828 MSRB1Q9NZV6 116 aa10.06□□□□□ -0.8
GPC4-201ENST00000370828 HIGD1BQ9P298 99 aa10.06□□□□□ -0.8
GPC4-201ENST00000370828 KLHL30-AS1Q8NEE0 82 aa10.06□□□□□ -0.8
GPC4-201ENST00000370828 H3BRN7 92 aa10.06□□□□□ -0.8
GPC4-201ENST00000370828 FAM19A5Q7Z5A7 132 aaPredicted RBP10.06□□□□□ -0.8
GPC4-201ENST00000370828 TRGV11A0A075B6L2 103 aa10.05□□□□□ -0.8
GPC4-201ENST00000370828 TRGV2A0A075B6R0 118 aa10.05□□□□□ -0.8
GPC4-201ENST00000370828 SDHAF1A6NFY7 115 aa10.05□□□□□ -0.8
GPC4-201ENST00000370828 LEPROTO15243 131 aa10.05□□□□□ -0.8
GPC4-201ENST00000370828 CRLF1O75462 422 aa10.05□□□□□ -0.8
GPC4-201ENST00000370828 RASL10AQ92737 203 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms