RNA–Protein interactions for RNA: ENST00000368297.5

LMNA-203, Transcript of lamin A/C, humanhuman

TSL 2 BASIC

Gene LMNA, Length 1,679 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-203ENST00000368297 NAT8BQ9UHF3 227 aa11.91□□□□□ -0.5
LMNA-203ENST00000368297 NDUFA6P56556 154 aa11.91□□□□□ -0.5
LMNA-203ENST00000368297 C9orf66Q5T8R8 295 aa11.91□□□□□ -0.5
LMNA-203ENST00000368297 WDR73Q6P4I2 378 aa11.91□□□□□ -0.5
LMNA-203ENST00000368297 OR2K2Q8NGT1 345 aa11.91□□□□□ -0.5
LMNA-203ENST00000368297 SPATA3Q8NHX4 192 aa11.91□□□□□ -0.5
LMNA-203ENST00000368297 NDFIP1Q9BT67 221 aa11.91□□□□□ -0.5
LMNA-203ENST00000368297 UBE2CO00762 179 aa11.9□□□□□ -0.5
LMNA-203ENST00000368297 PHOX2AO14813 284 aa11.9□□□□□ -0.5
LMNA-203ENST00000368297 TCL1AP56279 114 aa11.9□□□□□ -0.5
LMNA-203ENST00000368297 S100A12P80511 92 aa11.9□□□□□ -0.5
LMNA-203ENST00000368297 FABP9Q0Z7S8 132 aa11.9□□□□□ -0.5
LMNA-203ENST00000368297 C12orf57Q99622 126 aa11.9□□□□□ -0.5
LMNA-203ENST00000368297 S100A8P05109 93 aa11.89□□□□□ -0.51
LMNA-203ENST00000368297 ERCC8Q13216 396 aa11.89□□□□□ -0.51
LMNA-203ENST00000368297 OR10J6PQ8NGY7 276 aa11.89□□□□□ -0.51
LMNA-203ENST00000368297 VGLL1Q99990 258 aa11.89□□□□□ -0.51
LMNA-203ENST00000368297 MCRIP2Q9BUT9 160 aaKnown RBP11.89□□□□□ -0.51
LMNA-203ENST00000368297 GFRA4Q9GZZ7 299 aa11.89□□□□□ -0.51
LMNA-203ENST00000368297 FAM231BA6NCW3 169 aa11.88□□□□□ -0.51
LMNA-203ENST00000368297 CA1P00915 261 aaPredicted RBP11.88□□□□□ -0.51
LMNA-203ENST00000368297 MT-ND6P03923 174 aa11.88□□□□□ -0.51
LMNA-203ENST00000368297 ZNF705DP0CH99 300 aaPredicted RBP11.88□□□□□ -0.51
LMNA-203ENST00000368297 ZNF705BP0CI00 300 aaPredicted RBP11.88□□□□□ -0.51
LMNA-203ENST00000368297 INSL3P51460 131 aa11.88□□□□□ -0.51
LMNA-203ENST00000368297 DEFB1P60022 68 aa11.88□□□□□ -0.51
LMNA-203ENST00000368297 RASL11AQ6T310 242 aa11.88□□□□□ -0.51
LMNA-203ENST00000368297 LINC00322Q6ZN03 302 aaPredicted RBP11.88□□□□□ -0.51
LMNA-203ENST00000368297 ZC2HC1AQ96GY0 325 aa11.88□□□□□ -0.51
LMNA-203ENST00000368297 GNB1LQ9BYB4 327 aa11.88□□□□□ -0.51
LMNA-203ENST00000368297 NPIPB6E9PJ23 425 aa11.87□□□□□ -0.51
LMNA-203ENST00000368297 F6UB75 175 aa11.87□□□□□ -0.51
LMNA-203ENST00000368297 HIST1H1AQ02539 215 aaPredicted RBP11.87□□□□□ -0.51
LMNA-203ENST00000368297 TMEM78Q5T7P6 136 aa11.87□□□□□ -0.51
LMNA-203ENST00000368297 COX8CQ7Z4L0 72 aa11.87□□□□□ -0.51
LMNA-203ENST00000368297 PRR25Q96S07 402 aa11.87□□□□□ -0.51
LMNA-203ENST00000368297 ASCL2Q99929 193 aa11.87□□□□□ -0.51
LMNA-203ENST00000368297 SMIM6P0DI80 62 aa11.87□□□□□ -0.51
LMNA-203ENST00000368297 DEFB131AP59861 70 aa11.87□□□□□ -0.51
LMNA-203ENST00000368297 OR8A1Q8NGG7 326 aa11.87□□□□□ -0.51
LMNA-203ENST00000368297 OR2D3Q8NGH3 330 aa11.87□□□□□ -0.51
LMNA-203ENST00000368297 Q8TAT8 98 aa11.87□□□□□ -0.51
LMNA-203ENST00000368297 NEU1Q99519 415 aa11.87□□□□□ -0.51
LMNA-203ENST00000368297 ZNF256Q9Y2P7 627 aaPredicted RBP11.87□□□□□ -0.51
LMNA-203ENST00000368297 SPINK4O60575 86 aa11.86□□□□□ -0.51
LMNA-203ENST00000368297 HOXA5P20719 270 aa11.86□□□□□ -0.51
LMNA-203ENST00000368297 FAM162BQ5T6X4 162 aa11.86□□□□□ -0.51
LMNA-203ENST00000368297 EBLN2Q6P2I7 272 aa11.86□□□□□ -0.51
LMNA-203ENST00000368297 ATP5L2Q7Z4Y8 100 aa11.86□□□□□ -0.51
LMNA-203ENST00000368297 WFDC9Q8NEX5 89 aa11.86□□□□□ -0.51
LMNA-203ENST00000368297 NUP35Q8NFH5 326 aa11.86□□□□□ -0.51
LMNA-203ENST00000368297 AGPAT4-IT1Q9H0P7 198 aa11.86□□□□□ -0.51
LMNA-203ENST00000368297 MAP6D1Q9H9H5 199 aa11.86□□□□□ -0.51
LMNA-203ENST00000368297 XKRY2A2RUG3 117 aa11.85□□□□□ -0.51
LMNA-203ENST00000368297 HIGD1CA8MV81 97 aa11.85□□□□□ -0.51
LMNA-203ENST00000368297 SNURFLB1AK76 121 aa11.85□□□□□ -0.51
LMNA-203ENST00000368297 C9orf47Q6ZRZ4 202 aa11.85□□□□□ -0.51
LMNA-203ENST00000368297 C8orf49Q96NF6 230 aa11.85□□□□□ -0.51
LMNA-203ENST00000368297 MDFIQ99750 246 aa11.85□□□□□ -0.51
LMNA-203ENST00000368297 MRPL18Q9H0U6 180 aaKnown RBP11.85□□□□□ -0.51
LMNA-203ENST00000368297 HLA-DQA1P01909 254 aa11.84□□□□□ -0.51
LMNA-203ENST00000368297 IGLL1P15814 213 aa11.84□□□□□ -0.51
LMNA-203ENST00000368297 ZNF138P52744 262 aa11.84□□□□□ -0.51
LMNA-203ENST00000368297 RAB4BP61018 213 aa11.84□□□□□ -0.51
LMNA-203ENST00000368297 MRPL54Q6P161 138 aaKnown RBP11.84□□□□□ -0.51
LMNA-203ENST00000368297 GDF5OSQ5U4N7 250 aa11.84□□□□□ -0.51
LMNA-203ENST00000368297 FOXI2Q6ZQN5 318 aa11.84□□□□□ -0.51
LMNA-203ENST00000368297 LINC00477Q96M19 166 aa11.84□□□□□ -0.51
LMNA-203ENST00000368297 A0A0J9YX75 114 aa11.83□□□□□ -0.52
LMNA-203ENST00000368297 PCP4L1A6NKN8 68 aa11.83□□□□□ -0.52
LMNA-203ENST00000368297 KNCNA6PVL3 124 aa11.83□□□□□ -0.52
LMNA-203ENST00000368297 OR11H12B2RN74 326 aa11.83□□□□□ -0.52
LMNA-203ENST00000368297 DUSP14O95147 198 aaKnown RBP11.83□□□□□ -0.52
LMNA-203ENST00000368297 CMC4P56277 68 aaPredicted RBP11.83□□□□□ -0.52
LMNA-203ENST00000368297 Q6AWC8 147 aa11.83□□□□□ -0.52
LMNA-203ENST00000368297 TMEM136Q6ZRR5 245 aa11.83□□□□□ -0.52
LMNA-203ENST00000368297 GPR61Q9BZJ8 451 aa11.83□□□□□ -0.52
LMNA-203ENST00000368297 PPP1R14DQ9NXH3 145 aa11.83□□□□□ -0.52
LMNA-203ENST00000368297 TMEM189A5PLL7 270 aa11.82□□□□□ -0.52
LMNA-203ENST00000368297 CRIP1P50238 77 aa11.82□□□□□ -0.52
LMNA-203ENST00000368297 FOXA3P55318 350 aaPredicted RBP11.82□□□□□ -0.52
LMNA-203ENST00000368297 RPS20P60866 119 aaKnown RBP11.82□□□□□ -0.52
LMNA-203ENST00000368297 CTAG1AP78358 180 aa11.82□□□□□ -0.52
LMNA-203ENST00000368297 BEAN1Q3B7T3 259 aa11.82□□□□□ -0.52
LMNA-203ENST00000368297 ODF3L2Q3SX64 289 aa11.82□□□□□ -0.52
LMNA-203ENST00000368297 APRG1Q8IVJ8 170 aa11.82□□□□□ -0.52
LMNA-203ENST00000368297 FABP5P3A8MUU1 101 aa11.81□□□□□ -0.52
LMNA-203ENST00000368297 SH2D1AO60880 128 aa11.81□□□□□ -0.52
LMNA-203ENST00000368297 IGKV3-20P01619 116 aa11.81□□□□□ -0.52
LMNA-203ENST00000368297 ZNF124Q15973 351 aa11.81□□□□□ -0.52
LMNA-203ENST00000368297 PGLYRP4Q96LB8 373 aa11.81□□□□□ -0.52
LMNA-203ENST00000368297 LENEPQ9Y5L5 61 aa11.81□□□□□ -0.52
LMNA-203ENST00000368297 STAB1Q9NY15 2570 aa11.81□□□□□ -0.52
LMNA-203ENST00000368297 S100A2P29034 98 aa11.81□□□□□ -0.52
LMNA-203ENST00000368297 COA6Q5JTJ3 125 aaKnown RBP11.81□□□□□ -0.52
LMNA-203ENST00000368297 GTSF1Q8WW33 167 aa11.81□□□□□ -0.52
LMNA-203ENST00000368297 BORCS7Q96B45 105 aa11.81□□□□□ -0.52
LMNA-203ENST00000368297 APCSP02743 223 aa11.8□□□□□ -0.52
LMNA-203ENST00000368297 CD7P09564 240 aa11.8□□□□□ -0.52
LMNA-203ENST00000368297 RIPPLY3P57055 190 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms