RNA–Protein interactions for RNA: ENST00000366896.5

PRKN-204, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 2,514 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-204ENST00000366896 C1orf122Q6ZSJ8 110 aa11.42□□□□□ -0.58
PRKN-204ENST00000366896 TEX48A0A1B0GUV7 120 aa11.42□□□□□ -0.58
PRKN-204ENST00000366896 SCGB2A1O75556 95 aa11.42□□□□□ -0.58
PRKN-204ENST00000366896 NPYP01303 97 aa11.42□□□□□ -0.58
PRKN-204ENST00000366896 RPL7P18124 248 aaKnown RBP11.42□□□□□ -0.58
PRKN-204ENST00000366896 HES1Q14469 280 aa11.42□□□□□ -0.58
PRKN-204ENST00000366896 TM4SF20Q53R12 229 aa11.42□□□□□ -0.58
PRKN-204ENST00000366896 TIMD4Q96H15 378 aa11.42□□□□□ -0.58
PRKN-204ENST00000366896 TMSB15BA0A087X1C1 80 aa11.41□□□□□ -0.58
PRKN-204ENST00000366896 IGHV3-23P01764 117 aa11.41□□□□□ -0.58
PRKN-204ENST00000366896 FXYD2P54710 66 aa11.41□□□□□ -0.58
PRKN-204ENST00000366896 NDPQ00604 133 aa11.41□□□□□ -0.58
PRKN-204ENST00000366896 EBI3Q14213 229 aa11.41□□□□□ -0.58
PRKN-204ENST00000366896 PSMG4Q5JS54 123 aa11.41□□□□□ -0.58
PRKN-204ENST00000366896 CCDC144NLQ6NUI1 221 aa11.41□□□□□ -0.58
PRKN-204ENST00000366896 SPG11Q96JI7 2443 aa11.41□□□□□ -0.58
PRKN-204ENST00000366896 RPL24P83731 157 aaKnown RBP11.41□□□□□ -0.58
PRKN-204ENST00000366896 C21orf62Q9NYP8 219 aa11.41□□□□□ -0.58
PRKN-204ENST00000366896 PTPN13Q12923 2485 aa11.41□□□□□ -0.58
PRKN-204ENST00000366896 SCGB1A1P11684 91 aa11.4□□□□□ -0.58
PRKN-204ENST00000366896 GCSHP23434 173 aa11.4□□□□□ -0.58
PRKN-204ENST00000366896 CKS2P33552 79 aa11.4□□□□□ -0.58
PRKN-204ENST00000366896 Q8N6K4 173 aa11.4□□□□□ -0.58
PRKN-204ENST00000366896 ARPC1AQ92747 370 aa11.4□□□□□ -0.58
PRKN-204ENST00000366896 ZMAT4Q9H898 229 aa11.4□□□□□ -0.58
PRKN-204ENST00000366896 CELSR2Q9HCU4 2923 aa11.4□□□□□ -0.58
PRKN-204ENST00000366896 SH2D1AO60880 128 aa11.4□□□□□ -0.59
PRKN-204ENST00000366896 PHLDA1Q8WV24 401 aaPredicted RBP11.4□□□□□ -0.59
PRKN-204ENST00000366896 VGLL1Q99990 258 aa11.4□□□□□ -0.59
PRKN-204ENST00000366896 NBPF19A0A087WUL8 3843 aa11.39□□□□□ -0.59
PRKN-204ENST00000366896 IGKV2-40A0A087WW87 121 aaPredicted RBP11.39□□□□□ -0.59
PRKN-204ENST00000366896 IGKV2D-26A0A0A0MRZ7 120 aa11.39□□□□□ -0.59
PRKN-204ENST00000366896 SMKR1H3BMG3 65 aa11.39□□□□□ -0.59
PRKN-204ENST00000366896 IGKV2D-40P01614 121 aaPredicted RBP11.39□□□□□ -0.59
PRKN-204ENST00000366896 KLK9Q2XQG4 91 aa11.39□□□□□ -0.59
PRKN-204ENST00000366896 DYNAPQ8N1N2 210 aa11.39□□□□□ -0.59
PRKN-204ENST00000366896 KLK9Q9UKQ9 250 aa11.39□□□□□ -0.59
PRKN-204ENST00000366896 HHLA3Q9XRX5 114 aa11.39□□□□□ -0.59
PRKN-204ENST00000366896 BMI1P35226 326 aa11.39□□□□□ -0.59
PRKN-204ENST00000366896 ATP5J2P56134 94 aa11.39□□□□□ -0.59
PRKN-204ENST00000366896 MINOS1Q5TGZ0 78 aa11.39□□□□□ -0.59
PRKN-204ENST00000366896 WFDC3Q8IUB2 231 aa11.39□□□□□ -0.59
PRKN-204ENST00000366896 PRR25Q96S07 402 aa11.39□□□□□ -0.59
PRKN-204ENST00000366896 CHAC1Q9BUX1 264 aa11.39□□□□□ -0.59
PRKN-204ENST00000366896 MINOS1-NBL1R4GNA1 71 aa11.39□□□□□ -0.59
PRKN-204ENST00000366896 LINC01546A6NGU7 62 aa11.38□□□□□ -0.59
PRKN-204ENST00000366896 ODF1Q14990 250 aa11.38□□□□□ -0.59
PRKN-204ENST00000366896 C18orf15Q96N68 181 aa11.38□□□□□ -0.59
PRKN-204ENST00000366896 AZU1P20160 251 aa11.38□□□□□ -0.59
PRKN-204ENST00000366896 CENPEQ02224 2701 aa11.37□□□□□ -0.59
PRKN-204ENST00000366896 IGFL4Q6B9Z1 124 aa11.37□□□□□ -0.59
PRKN-204ENST00000366896 CNFNQ9BYD5 112 aa11.37□□□□□ -0.59
PRKN-204ENST00000366896 K7ERJ3 54 aa11.37□□□□□ -0.59
PRKN-204ENST00000366896 IGLC6P0CF74 106 aa11.37□□□□□ -0.59
PRKN-204ENST00000366896 Q8TAT8 98 aa11.37□□□□□ -0.59
PRKN-204ENST00000366896 SIGMAR1Q99720 223 aa11.37□□□□□ -0.59
PRKN-204ENST00000366896 TM2D2Q9BX73 214 aa11.37□□□□□ -0.59
PRKN-204ENST00000366896 TTTY13Q9BZ97 58 aa11.37□□□□□ -0.59
PRKN-204ENST00000366896 SVEP1Q4LDE5 3571 aa11.36□□□□□ -0.59
PRKN-204ENST00000366896 IGHV3OR16-8A0A075B7F1 116 aa11.36□□□□□ -0.59
PRKN-204ENST00000366896 NCBP2LA6PVI3 153 aaKnown RBP11.36□□□□□ -0.59
PRKN-204ENST00000366896 TWIST1Q15672 202 aa11.36□□□□□ -0.59
PRKN-204ENST00000366896 TRBV25-1A0A075B6N4 114 aa11.36□□□□□ -0.59
PRKN-204ENST00000366896 CTSGP08311 255 aa11.36□□□□□ -0.59
PRKN-204ENST00000366896 HLA-DMBP28068 263 aa11.36□□□□□ -0.59
PRKN-204ENST00000366896 RAB9AP51151 201 aa11.36□□□□□ -0.59
PRKN-204ENST00000366896 GTSF1LQ9H1H1 148 aa11.36□□□□□ -0.59
PRKN-204ENST00000366896 MAP1LC3AQ9H492 121 aa11.36□□□□□ -0.59
PRKN-204ENST00000366896 ABCA12Q86UK0 2595 aa11.35□□□□□ -0.59
PRKN-204ENST00000366896 EGR2P11161 476 aaPredicted RBP11.35□□□□□ -0.59
PRKN-204ENST00000366896 EVI2AP22794 236 aa11.35□□□□□ -0.59
PRKN-204ENST00000366896 FCER1GP30273 86 aa11.35□□□□□ -0.59
PRKN-204ENST00000366896 FOXI2Q6ZQN5 318 aa11.35□□□□□ -0.59
PRKN-204ENST00000366896 BPESC1Q9GZL8 116 aa11.35□□□□□ -0.59
PRKN-204ENST00000366896 BEX4Q9NWD9 120 aaPredicted RBP11.35□□□□□ -0.59
PRKN-204ENST00000366896 SMPXQ9UHP9 88 aa11.35□□□□□ -0.59
PRKN-204ENST00000366896 E9PLD3 99 aa11.35□□□□□ -0.59
PRKN-204ENST00000366896 NDUFS8O00217 210 aa11.35□□□□□ -0.59
PRKN-204ENST00000366896 IGKCP01834 107 aa11.35□□□□□ -0.59
PRKN-204ENST00000366896 ZNF80P51504 273 aaPredicted RBP11.35□□□□□ -0.59
PRKN-204ENST00000366896 CD300EQ496F6 205 aaPredicted RBP11.35□□□□□ -0.59
PRKN-204ENST00000366896 VMO1Q7Z5L0 202 aa11.35□□□□□ -0.59
PRKN-204ENST00000366896 CEND1Q8N111 149 aa11.35□□□□□ -0.59
PRKN-204ENST00000366896 RNF185Q96GF1 192 aa11.35□□□□□ -0.59
PRKN-204ENST00000366896 SPANXB1Q9NS25 103 aaPredicted RBP11.35□□□□□ -0.59
PRKN-204ENST00000366896 IGHV3-35A0A0C4DH35 117 aa11.34□□□□□ -0.59
PRKN-204ENST00000366896 F8W1H4 67 aa11.34□□□□□ -0.59
PRKN-204ENST00000366896 IGHG4P01861 327 aa11.34□□□□□ -0.59
PRKN-204ENST00000366896 HLA-DRB4P13762 266 aa11.34□□□□□ -0.59
PRKN-204ENST00000366896 LEPP41159 167 aa11.34□□□□□ -0.59
PRKN-204ENST00000366896 C10orf105Q8TEF2 133 aa11.34□□□□□ -0.59
PRKN-204ENST00000366896 NHP2Q9NX24 153 aaKnown RBP11.34□□□□□ -0.59
PRKN-204ENST00000366896 SMAD5-AS1Q9Y6J3 95 aa11.34□□□□□ -0.59
PRKN-204ENST00000366896 HLA-DRB4X5D2U9 266 aa11.34□□□□□ -0.59
PRKN-204ENST00000366896 DEFB113Q30KQ7 82 aa11.34□□□□□ -0.59
PRKN-204ENST00000366896 TSSC4Q9Y5U2 329 aaPredicted RBP11.34□□□□□ -0.59
PRKN-204ENST00000366896 POLQO75417 2590 aa11.34□□□□□ -0.59
PRKN-204ENST00000366896 ASH1LQ9NR48 2969 aaKnown RBP11.33□□□□□ -0.6
PRKN-204ENST00000366896 RBAKDNA6NC62 111 aa11.33□□□□□ -0.6
PRKN-204ENST00000366896 GAGE12HA6NDE8 117 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms