RNA–Protein interactions for RNA: ENST00000366766.6

CDC42BPA-203, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,610 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-203ENST00000366766 TRAV12-3A0A0B4J271 114 aa9.62□□□□□ -0.87
CDC42BPA-203ENST00000366766 COL8A2P25067 703 aa9.62□□□□□ -0.87
CDC42BPA-203ENST00000366766 BPESC1Q9GZL8 116 aa9.62□□□□□ -0.87
CDC42BPA-203ENST00000366766 JPT2Q9H910 190 aa9.62□□□□□ -0.87
CDC42BPA-203ENST00000366766 MUC22E2RYF6 1773 aaPredicted RBP9.62□□□□□ -0.87
CDC42BPA-203ENST00000366766 TRGV1A0A0A0MS02 117 aa9.62□□□□□ -0.87
CDC42BPA-203ENST00000366766 F8VRH5 84 aa9.62□□□□□ -0.87
CDC42BPA-203ENST00000366766 SPANXCQ9NY87 97 aa9.62□□□□□ -0.87
CDC42BPA-203ENST00000366766 IGFL2Q6UWQ7 119 aa9.62□□□□□ -0.87
CDC42BPA-203ENST00000366766 ZNF493Q6ZR52 646 aa9.62□□□□□ -0.87
CDC42BPA-203ENST00000366766 C8orf86Q6ZUL3 223 aa9.62□□□□□ -0.87
CDC42BPA-203ENST00000366766 LYPD6Q86Y78 171 aa9.61□□□□□ -0.87
CDC42BPA-203ENST00000366766 CDKN1BP46527 198 aa9.61□□□□□ -0.87
CDC42BPA-203ENST00000366766 CYYR1Q96J86 154 aa9.61□□□□□ -0.87
CDC42BPA-203ENST00000366766 A6NNC1 897 aa9.61□□□□□ -0.87
CDC42BPA-203ENST00000366766 SLAQ13239 276 aa9.61□□□□□ -0.87
CDC42BPA-203ENST00000366766 C9orf118A6NHY6 69 aa9.61□□□□□ -0.87
CDC42BPA-203ENST00000366766 ATP6V0E1O15342 81 aa9.61□□□□□ -0.87
CDC42BPA-203ENST00000366766 ABCA12Q86UK0 2595 aa9.61□□□□□ -0.87
CDC42BPA-203ENST00000366766 C2orf82Q6UX34 121 aa9.61□□□□□ -0.87
CDC42BPA-203ENST00000366766 KLF2Q9Y5W3 355 aaPredicted RBP9.61□□□□□ -0.87
CDC42BPA-203ENST00000366766 LINC00158P58513 81 aa9.61□□□□□ -0.87
CDC42BPA-203ENST00000366766 PRRC2CQ9Y520 2896 aaKnown RBP9.61□□□□□ -0.87
CDC42BPA-203ENST00000366766 VGLL1Q99990 258 aa9.6□□□□□ -0.87
CDC42BPA-203ENST00000366766 SMIM2Q9BVW6 85 aa9.6□□□□□ -0.87
CDC42BPA-203ENST00000366766 USP9YO00507 2555 aaPredicted RBP9.6□□□□□ -0.87
CDC42BPA-203ENST00000366766 SAP30O75446 220 aa9.6□□□□□ -0.87
CDC42BPA-203ENST00000366766 SS18Q15532 418 aa9.6□□□□□ -0.87
CDC42BPA-203ENST00000366766 RHOHQ15669 191 aa9.6□□□□□ -0.87
CDC42BPA-203ENST00000366766 C2orf66Q6UXQ4 117 aa9.6□□□□□ -0.87
CDC42BPA-203ENST00000366766 LINC00479Q96M42 142 aa9.6□□□□□ -0.87
CDC42BPA-203ENST00000366766 HLA-DRB4P13762 266 aa9.6□□□□□ -0.87
CDC42BPA-203ENST00000366766 HLA-DRB4X5D2U9 266 aa9.6□□□□□ -0.87
CDC42BPA-203ENST00000366766 Q6ZWC4 215 aa9.6□□□□□ -0.87
CDC42BPA-203ENST00000366766 AGRNO00468 2067 aa9.59□□□□□ -0.87
CDC42BPA-203ENST00000366766 IGLC7A0M8Q6 106 aa9.59□□□□□ -0.87
CDC42BPA-203ENST00000366766 UNQ6494/PRO21346Q6UXR6 183 aa9.59□□□□□ -0.87
CDC42BPA-203ENST00000366766 KLHL30-AS1Q8NEE0 82 aa9.59□□□□□ -0.87
CDC42BPA-203ENST00000366766 HAPLN4Q86UW8 402 aa9.59□□□□□ -0.87
CDC42BPA-203ENST00000366766 NDPQ00604 133 aa9.59□□□□□ -0.87
CDC42BPA-203ENST00000366766 TMEM95Q3KNT9 176 aa9.59□□□□□ -0.87
CDC42BPA-203ENST00000366766 MRPL51Q4U2R6 128 aaKnown RBP9.59□□□□□ -0.87
CDC42BPA-203ENST00000366766 FAM215AQ9Y5M1 114 aa9.59□□□□□ -0.87
CDC42BPA-203ENST00000366766 ZNF134P52741 427 aa9.59□□□□□ -0.87
CDC42BPA-203ENST00000366766 ZNF524Q96C55 264 aa9.59□□□□□ -0.87
CDC42BPA-203ENST00000366766 SPXQ9BT56 116 aa9.59□□□□□ -0.87
CDC42BPA-203ENST00000366766 PRB3Q04118 309 aaPredicted RBP9.59□□□□□ -0.87
CDC42BPA-203ENST00000366766 OVOL3O00110 214 aa9.59□□□□□ -0.87
CDC42BPA-203ENST00000366766 SSBP2P81877 361 aaPredicted RBP9.59□□□□□ -0.87
CDC42BPA-203ENST00000366766 PAX4O43316 350 aa9.58□□□□□ -0.88
CDC42BPA-203ENST00000366766 LY6DQ14210 128 aa9.58□□□□□ -0.88
CDC42BPA-203ENST00000366766 ELANEP08246 267 aa9.58□□□□□ -0.88
CDC42BPA-203ENST00000366766 CST9LQ9H4G1 147 aa9.58□□□□□ -0.88
CDC42BPA-203ENST00000366766 PRIMA1Q86XR5 153 aa9.58□□□□□ -0.88
CDC42BPA-203ENST00000366766 PPDPFLQ8WWR9 84 aa9.58□□□□□ -0.88
CDC42BPA-203ENST00000366766 A0A1W2PRX2 142 aa9.58□□□□□ -0.88
CDC42BPA-203ENST00000366766 KLF12Q9Y4X4 402 aa9.58□□□□□ -0.88
CDC42BPA-203ENST00000366766 IGHV1OR15-1A0A075B7D0 117 aa9.58□□□□□ -0.88
CDC42BPA-203ENST00000366766 CD33P20138 364 aa9.58□□□□□ -0.88
CDC42BPA-203ENST00000366766 FN1P02751 2386 aaKnown RBP9.58□□□□□ -0.88
CDC42BPA-203ENST00000366766 LINC00205P59089 165 aa9.57□□□□□ -0.88
CDC42BPA-203ENST00000366766 TP53TG1Q9Y2A0 90 aa9.57□□□□□ -0.88
CDC42BPA-203ENST00000366766 KIR2DL5BA0A0G2JN68 375 aa9.57□□□□□ -0.88
CDC42BPA-203ENST00000366766 KIR2DL5BA0A0G2JPC4 375 aa9.57□□□□□ -0.88
CDC42BPA-203ENST00000366766 KIR2DL5AQ8N109 375 aa9.57□□□□□ -0.88
CDC42BPA-203ENST00000366766 OCIAD2Q56VL3 154 aa9.57□□□□□ -0.88
CDC42BPA-203ENST00000366766 SNHG12Q9BXW3 62 aa9.57□□□□□ -0.88
CDC42BPA-203ENST00000366766 C6orf226Q5I0X4 101 aa9.57□□□□□ -0.88
CDC42BPA-203ENST00000366766 PTPRBP23467 1997 aa9.57□□□□□ -0.88
CDC42BPA-203ENST00000366766 SIGLEC8Q9NYZ4 499 aa9.57□□□□□ -0.88
CDC42BPA-203ENST00000366766 ZC2HC1AQ96GY0 325 aa9.57□□□□□ -0.88
CDC42BPA-203ENST00000366766 SDHAF1A6NFY7 115 aa9.57□□□□□ -0.88
CDC42BPA-203ENST00000366766 ZNF503-AS2A6NEH8 195 aa9.56□□□□□ -0.88
CDC42BPA-203ENST00000366766 NPBQ8NG41 125 aa9.56□□□□□ -0.88
CDC42BPA-203ENST00000366766 C1orf159Q96HA4 380 aa9.56□□□□□ -0.88
CDC42BPA-203ENST00000366766 H3BMM0 161 aa9.56□□□□□ -0.88
CDC42BPA-203ENST00000366766 SRD5A1P18405 259 aa9.56□□□□□ -0.88
CDC42BPA-203ENST00000366766 DMRTC2Q8IXT2 367 aaPredicted RBP9.56□□□□□ -0.88
CDC42BPA-203ENST00000366766 HLA-DMBP28068 263 aa9.56□□□□□ -0.88
CDC42BPA-203ENST00000366766 BRD3OSQ6XYD6 125 aa9.56□□□□□ -0.88
CDC42BPA-203ENST00000366766 C11orf53Q8IXP5 236 aa9.56□□□□□ -0.88
CDC42BPA-203ENST00000366766 C5orf24Q7Z6I8 188 aa9.56□□□□□ -0.88
CDC42BPA-203ENST00000366766 ZNF48Q96MX3 618 aaPredicted RBP9.56□□□□□ -0.88
CDC42BPA-203ENST00000366766 LINC01619G3V211 115 aa9.55□□□□□ -0.88
CDC42BPA-203ENST00000366766 PTPRSQ13332 1948 aa9.55□□□□□ -0.88
CDC42BPA-203ENST00000366766 TRBV25-1A0A075B6N4 114 aa9.55□□□□□ -0.88
CDC42BPA-203ENST00000366766 IGHV7-4-1A0A0J9YVY3 117 aa9.55□□□□□ -0.88
CDC42BPA-203ENST00000366766 DPH3Q96FX2 82 aa9.55□□□□□ -0.88
CDC42BPA-203ENST00000366766 FOXE3Q13461 319 aa9.55□□□□□ -0.88
CDC42BPA-203ENST00000366766 NBL1P41271 181 aa9.55□□□□□ -0.88
CDC42BPA-203ENST00000366766 PRSS57Q6UWY2 283 aa9.55□□□□□ -0.88
CDC42BPA-203ENST00000366766 COL4A3Q01955 1670 aa9.55□□□□□ -0.88
CDC42BPA-203ENST00000366766 CR1LQ2VPA4 569 aa9.55□□□□□ -0.88
CDC42BPA-203ENST00000366766 WIPF3A6NGB9 483 aa9.55□□□□□ -0.88
CDC42BPA-203ENST00000366766 LCNL1Q6ZST4 164 aa9.55□□□□□ -0.88
CDC42BPA-203ENST00000366766 ZNF491Q8N8L2 437 aa9.55□□□□□ -0.88
CDC42BPA-203ENST00000366766 K7EP34 96 aa9.54□□□□□ -0.88
CDC42BPA-203ENST00000366766 ADAMTSL5Q6ZMM2 481 aa9.54□□□□□ -0.88
CDC42BPA-203ENST00000366766 FOXI2Q6ZQN5 318 aa9.54□□□□□ -0.88
CDC42BPA-203ENST00000366766 MLANAQ16655 118 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms