RNA–Protein interactions for RNA: ENST00000366481.3

TRIM58-201, Transcript of tripartite motif containing 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM58, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM58-201ENST00000366481 ZNF493Q6ZR52 646 aa15.37■□□□□ 0.05
TRIM58-201ENST00000366481 KLK15Q9H2R5 256 aa15.37■□□□□ 0.05
TRIM58-201ENST00000366481 TIMM23O14925 209 aa15.36■□□□□ 0.05
TRIM58-201ENST00000366481 ZNF418Q8TF45 676 aaPredicted RBP15.36■□□□□ 0.05
TRIM58-201ENST00000366481 BUB1B-PAK6H3BSN5 160 aa15.36■□□□□ 0.05
TRIM58-201ENST00000366481 WI2-2373I1.2A0A1W2PRP0 233 aa15.36■□□□□ 0.05
TRIM58-201ENST00000366481 TEX22C9J3V5 150 aa15.36■□□□□ 0.05
TRIM58-201ENST00000366481 MYOZ3Q8TDC0 251 aa15.36■□□□□ 0.05
TRIM58-201ENST00000366481 MRPL35Q9NZE8 188 aaKnown RBP15.36■□□□□ 0.05
TRIM58-201ENST00000366481 TMEM14CQ9P0S9 112 aa15.36■□□□□ 0.05
TRIM58-201ENST00000366481 EGR2P11161 476 aaPredicted RBP15.35■□□□□ 0.05
TRIM58-201ENST00000366481 RNF125Q96EQ8 232 aa15.35■□□□□ 0.05
TRIM58-201ENST00000366481 LINC00311Q8N616 119 aa15.35■□□□□ 0.05
TRIM58-201ENST00000366481 SYT8Q8NBV8 401 aa15.35■□□□□ 0.05
TRIM58-201ENST00000366481 NCBP2LA6PVI3 153 aaKnown RBP15.34■□□□□ 0.05
TRIM58-201ENST00000366481 E9PLD3 99 aa15.34■□□□□ 0.05
TRIM58-201ENST00000366481 SHANK2-AS3Q9BTD1 123 aa15.34■□□□□ 0.05
TRIM58-201ENST00000366481 HHLA3Q9XRX5 114 aa15.34■□□□□ 0.05
TRIM58-201ENST00000366481 CYSLTR1Q9Y271 337 aa15.34■□□□□ 0.05
TRIM58-201ENST00000366481 UFC1Q9Y3C8 167 aa15.34■□□□□ 0.05
TRIM58-201ENST00000366481 OVOL3O00110 214 aa15.34■□□□□ 0.05
TRIM58-201ENST00000366481 TNFRSF6BO95407 300 aa15.34■□□□□ 0.05
TRIM58-201ENST00000366481 IGKV1-17P01599 117 aa15.34■□□□□ 0.05
TRIM58-201ENST00000366481 SPINK8P0C7L1 97 aa15.34■□□□□ 0.05
TRIM58-201ENST00000366481 MAPKAPK5-AS1Q8N8E1 139 aa15.34■□□□□ 0.05
TRIM58-201ENST00000366481 IGLV1-47P01700 117 aa15.34■□□□□ 0.05
TRIM58-201ENST00000366481 SVIPQ8NHG7 77 aa15.34■□□□□ 0.05
TRIM58-201ENST00000366481 HIGD1BQ9P298 99 aa15.34■□□□□ 0.05
TRIM58-201ENST00000366481 USP9YO00507 2555 aaPredicted RBP15.33■□□□□ 0.05
TRIM58-201ENST00000366481 CD3EP07766 207 aa15.33■□□□□ 0.04
TRIM58-201ENST00000366481 MRPL16Q9NX20 251 aaKnown RBP15.33■□□□□ 0.04
TRIM58-201ENST00000366481 CDSNQ15517 529 aa15.33■□□□□ 0.04
TRIM58-201ENST00000366481 MRAP2Q96G30 205 aa15.33■□□□□ 0.04
TRIM58-201ENST00000366481 SMPXQ9UHP9 88 aa15.32■□□□□ 0.04
TRIM58-201ENST00000366481 U3KQK5 164 aa15.32■□□□□ 0.04
TRIM58-201ENST00000366481 TGFAP01135 160 aa15.32■□□□□ 0.04
TRIM58-201ENST00000366481 PSMB2P49721 201 aa15.31■□□□□ 0.04
TRIM58-201ENST00000366481 PHLDA1Q8WV24 401 aaPredicted RBP15.31■□□□□ 0.04
TRIM58-201ENST00000366481 CSPG4Q6UVK1 2322 aa15.31■□□□□ 0.04
TRIM58-201ENST00000366481 CRYBG3Q68DQ2 2970 aa15.31■□□□□ 0.04
TRIM58-201ENST00000366481 IGF2-ASQ6U949 168 aa15.31■□□□□ 0.04
TRIM58-201ENST00000366481 NXT2Q9NPJ8 142 aaKnown RBP15.31■□□□□ 0.04
TRIM58-201ENST00000366481 SPATA25Q9BR10 227 aa15.3■□□□□ 0.04
TRIM58-201ENST00000366481 ATP5LO75964 103 aa15.3■□□□□ 0.04
TRIM58-201ENST00000366481 NBL1P41271 181 aa15.3■□□□□ 0.04
TRIM58-201ENST00000366481 TM2D2Q9BX73 214 aa15.3■□□□□ 0.04
TRIM58-201ENST00000366481 H3BVH4 76 aa15.3■□□□□ 0.04
TRIM58-201ENST00000366481 CRYGBP07316 175 aa15.3■□□□□ 0.04
TRIM58-201ENST00000366481 SCGB1D4Q6XE38 83 aa15.3■□□□□ 0.04
TRIM58-201ENST00000366481 PGPEP1Q9NXJ5 209 aa15.3■□□□□ 0.04
TRIM58-201ENST00000366481 I3L2K1 104 aa15.29■□□□□ 0.04
TRIM58-201ENST00000366481 LY6DQ14210 128 aa15.29■□□□□ 0.04
TRIM58-201ENST00000366481 KAAG1Q9UBP8 84 aa15.29■□□□□ 0.04
TRIM58-201ENST00000366481 LRRK2Q5S007 2527 aa15.29■□□□□ 0.04
TRIM58-201ENST00000366481 VPS13CQ709C8 3753 aa15.29■□□□□ 0.04
TRIM58-201ENST00000366481 SRSF9Q13242 221 aaKnown RBP eCLIP15.29■□□□□ 0.04
TRIM58-201ENST00000366481 RRN3P1Q2M238 152 aa15.29■□□□□ 0.04
TRIM58-201ENST00000366481 ZNF672Q499Z4 452 aaPredicted RBP15.29■□□□□ 0.04
TRIM58-201ENST00000366481 EPG5Q9HCE0 2579 aa15.28■□□□□ 0.04
TRIM58-201ENST00000366481 HLA-DMBP28068 263 aa15.28■□□□□ 0.04
TRIM58-201ENST00000366481 ZNF491Q8N8L2 437 aa15.28■□□□□ 0.04
TRIM58-201ENST00000366481 GATD1Q8NB37 220 aa15.28■□□□□ 0.04
TRIM58-201ENST00000366481 PRR25Q96S07 402 aa15.28■□□□□ 0.04
TRIM58-201ENST00000366481 TRAV26-2A0A0B4J265 109 aa15.28■□□□□ 0.04
TRIM58-201ENST00000366481 OR11H12B2RN74 326 aa15.28■□□□□ 0.04
TRIM58-201ENST00000366481 H3BRN7 92 aa15.28■□□□□ 0.04
TRIM58-201ENST00000366481 HOXA3O43365 443 aaPredicted RBP15.28■□□□□ 0.04
TRIM58-201ENST00000366481 ZNF80P51504 273 aaPredicted RBP15.28■□□□□ 0.04
TRIM58-201ENST00000366481 EFNA4P52798 201 aa15.28■□□□□ 0.04
TRIM58-201ENST00000366481 OR11H1Q8NG94 326 aa15.28■□□□□ 0.04
TRIM58-201ENST00000366481 OR11H2Q8NH07 326 aa15.28■□□□□ 0.04
TRIM58-201ENST00000366481 TLN2Q9Y4G6 2542 aa15.28■□□□□ 0.04
TRIM58-201ENST00000366481 FLNCQ14315 2725 aa15.28■□□□□ 0.04
TRIM58-201ENST00000366481 K7EIM0 57 aa15.28■□□□□ 0.04
TRIM58-201ENST00000366481 CCL21O00585 134 aa15.28■□□□□ 0.04
TRIM58-201ENST00000366481 HOXB4P17483 251 aaPredicted RBP15.28■□□□□ 0.04
TRIM58-201ENST00000366481 LYPD1Q8N2G4 141 aa15.28■□□□□ 0.04
TRIM58-201ENST00000366481 GLMPQ8WWB7 406 aa15.28■□□□□ 0.04
TRIM58-201ENST00000366481 PTH2Q96A98 100 aa15.26■□□□□ 0.03
TRIM58-201ENST00000366481 IGHV3OR16-13A0A075B7E8 117 aa15.26■□□□□ 0.03
TRIM58-201ENST00000366481 IGHV3-74A0A0B4J1X5 117 aa15.26■□□□□ 0.03
TRIM58-201ENST00000366481 B9A039 149 aa15.26■□□□□ 0.03
TRIM58-201ENST00000366481 PSMG4Q5JS54 123 aa15.26■□□□□ 0.03
TRIM58-201ENST00000366481 ZNF502Q8TBZ5 544 aa15.26■□□□□ 0.03
TRIM58-201ENST00000366481 TRBV6-1A0A0K0K1D8 114 aa15.25■□□□□ 0.03
TRIM58-201ENST00000366481 C8orf86Q6ZUL3 223 aa15.25■□□□□ 0.03
TRIM58-201ENST00000366481 UTP20O75691 2785 aaKnown RBP15.25■□□□□ 0.03
TRIM58-201ENST00000366481 MT-ATP8P03928 68 aa15.25■□□□□ 0.03
TRIM58-201ENST00000366481 PAX8Q06710 450 aa15.25■□□□□ 0.03
TRIM58-201ENST00000366481 ERCC8Q13216 396 aa15.25■□□□□ 0.03
TRIM58-201ENST00000366481 DTX2Q86UW9 622 aa15.24■□□□□ 0.03
TRIM58-201ENST00000366481 C8orf31Q8N9H6 132 aa15.24■□□□□ 0.03
TRIM58-201ENST00000366481 FOXI1Q12951 378 aa15.24■□□□□ 0.03
TRIM58-201ENST00000366481 RNF185Q96GF1 192 aa15.23■□□□□ 0.03
TRIM58-201ENST00000366481 VKORC1Q9BQB6 163 aa15.23■□□□□ 0.03
TRIM58-201ENST00000366481 IGHV3-66A0A0C4DH42 116 aa15.23■□□□□ 0.03
TRIM58-201ENST00000366481 LINC01549A6NIU2 74 aa15.23■□□□□ 0.03
TRIM58-201ENST00000366481 NDPQ00604 133 aa15.23■□□□□ 0.03
TRIM58-201ENST00000366481 TCTEX1D4Q5JR98 221 aa15.23■□□□□ 0.03
TRIM58-201ENST00000366481 PVRIGQ6DKI7 326 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms