RNA–Protein interactions for RNA: ENST00000365559.1

RNU4-48P-201, Transcript of RNA, U4 small nuclear 48, pseudogene, humanhuman

BASIC

Gene RNU4-48P, Length 182 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-48P-201ENST00000365559 ARL5CA6NH57 179 aa0.09□□□□□ -2.4
RNU4-48P-201ENST00000365559 BBIP1A8MTZ0 92 aa0.09□□□□□ -2.4
RNU4-48P-201ENST00000365559 TMEM238C9JI98 176 aa0.09□□□□□ -2.4
RNU4-48P-201ENST00000365559 PPP5D1E7EU14 171 aa0.09□□□□□ -2.4
RNU4-48P-201ENST00000365559 H7BYZ3 331 aa0.09□□□□□ -2.4
RNU4-48P-201ENST00000365559 FXYD1O00168 92 aa0.09□□□□□ -2.4
RNU4-48P-201ENST00000365559 PFDN1O60925 122 aa0.09□□□□□ -2.4
RNU4-48P-201ENST00000365559 IGHV3-30P01768 117 aa0.09□□□□□ -2.4
RNU4-48P-201ENST00000365559 SAA1P0DJI8 122 aaPredicted RBP0.09□□□□□ -2.4
RNU4-48P-201ENST00000365559 IGHV3-30-5P0DP03 117 aa0.09□□□□□ -2.4
RNU4-48P-201ENST00000365559 TPT1P13693 172 aaKnown RBP0.09□□□□□ -2.4
RNU4-48P-201ENST00000365559 EVI2AP22794 236 aa0.09□□□□□ -2.4
RNU4-48P-201ENST00000365559 S100A11P31949 105 aa0.09□□□□□ -2.4
RNU4-48P-201ENST00000365559 SDC2P34741 201 aa0.09□□□□□ -2.4
RNU4-48P-201ENST00000365559 MAXP61244 160 aa0.09□□□□□ -2.4
RNU4-48P-201ENST00000365559 SPINK13Q1W4C9 94 aa0.09□□□□□ -2.4
RNU4-48P-201ENST00000365559 GLYATL3Q5SZD4 288 aa0.09□□□□□ -2.4
RNU4-48P-201ENST00000365559 TRIQKQ629K1 86 aa0.09□□□□□ -2.4
RNU4-48P-201ENST00000365559 XAF1Q6GPH4 301 aa0.09□□□□□ -2.4
RNU4-48P-201ENST00000365559 DCUN1D2Q6PH85 259 aa0.09□□□□□ -2.4
RNU4-48P-201ENST00000365559 C3orf62Q6ZUJ4 267 aa0.09□□□□□ -2.4
RNU4-48P-201ENST00000365559 STX12Q86Y82 276 aa0.09□□□□□ -2.4
RNU4-48P-201ENST00000365559 ARL17AQ8IVW1 177 aa0.09□□□□□ -2.4
RNU4-48P-201ENST00000365559 TCTEX1D1Q8N7M0 179 aa0.09□□□□□ -2.4
RNU4-48P-201ENST00000365559 DIRC1Q969H9 104 aa0.09□□□□□ -2.4
RNU4-48P-201ENST00000365559 ISOC1Q96CN7 298 aa0.09□□□□□ -2.4
RNU4-48P-201ENST00000365559 CARD19Q96LW7 228 aa0.09□□□□□ -2.4
RNU4-48P-201ENST00000365559 PRELID3AQ96N28 172 aa0.09□□□□□ -2.4
RNU4-48P-201ENST00000365559 CIB3Q96Q77 187 aaPredicted RBP0.09□□□□□ -2.4
RNU4-48P-201ENST00000365559 LRTM1Q9HBL6 345 aa0.09□□□□□ -2.4
RNU4-48P-201ENST00000365559 NUBP2Q9Y5Y2 271 aa0.09□□□□□ -2.4
RNU4-48P-201ENST00000365559 FGD6Q6ZV73 1430 aa0.09□□□□□ -2.4
RNU4-48P-201ENST00000365559 KIAA1109Q2LD37 5005 aa0.09□□□□□ -2.4
RNU4-48P-201ENST00000365559 CDK12Q9NYV4 1490 aaPredicted RBP0.09□□□□□ -2.4
RNU4-48P-201ENST00000365559 LRP5O75197 1615 aa0.09□□□□□ -2.4
RNU4-48P-201ENST00000365559 CACNA1HO95180 2353 aa0.09□□□□□ -2.4
RNU4-48P-201ENST00000365559 ZFYVE26Q68DK2 2539 aa0.09□□□□□ -2.4
RNU4-48P-201ENST00000365559 ABCA13Q86UQ4 5058 aa0.08□□□□□ -2.4
RNU4-48P-201ENST00000365559 KMT2CQ8NEZ4 4911 aaKnown RBP0.08□□□□□ -2.4
RNU4-48P-201ENST00000365559 IGSF10Q6WRI0 2623 aa0.08□□□□□ -2.4
RNU4-48P-201ENST00000365559 TPRP12270 2363 aaKnown RBP0.08□□□□□ -2.4
RNU4-48P-201ENST00000365559 FAM135BQ49AJ0 1406 aa0.08□□□□□ -2.4
RNU4-48P-201ENST00000365559 F5P12259 2224 aa0.08□□□□□ -2.4
RNU4-48P-201ENST00000365559 A0A1W2PPB8 328 aa0.08□□□□□ -2.4
RNU4-48P-201ENST00000365559 A0A1W2PRS3 328 aa0.08□□□□□ -2.4
RNU4-48P-201ENST00000365559 MAP1LC3B2A6NCE7 125 aa0.08□□□□□ -2.4
RNU4-48P-201ENST00000365559 A6NN06 94 aa0.08□□□□□ -2.4
RNU4-48P-201ENST00000365559 KIR3DP1A8MWS1 328 aa0.08□□□□□ -2.4
RNU4-48P-201ENST00000365559 E5RI56 91 aa0.08□□□□□ -2.4
RNU4-48P-201ENST00000365559 EDF1O60869 148 aaKnown RBP0.08□□□□□ -2.4
RNU4-48P-201ENST00000365559 CD3DP04234 171 aa0.08□□□□□ -2.4
RNU4-48P-201ENST00000365559 GYPBP06028 91 aa0.08□□□□□ -2.4
RNU4-48P-201ENST00000365559 BCL2P10415 239 aa0.08□□□□□ -2.4
RNU4-48P-201ENST00000365559 G0S2P27469 103 aa0.08□□□□□ -2.4
RNU4-48P-201ENST00000365559 CRYBA4P53673 196 aa0.08□□□□□ -2.4
RNU4-48P-201ENST00000365559 CSAG1Q6PB30 78 aa0.08□□□□□ -2.4
RNU4-48P-201ENST00000365559 C10orf99Q6UWK7 81 aa0.08□□□□□ -2.4
RNU4-48P-201ENST00000365559 SPINK6Q6UWN8 80 aa0.08□□□□□ -2.4
RNU4-48P-201ENST00000365559 LINC00305Q7Z4B0 112 aa0.08□□□□□ -2.4
RNU4-48P-201ENST00000365559 TEX29Q8N6K0 151 aa0.08□□□□□ -2.4
RNU4-48P-201ENST00000365559 TMEM229BQ8NBD8 167 aa0.08□□□□□ -2.4
RNU4-48P-201ENST00000365559 CCDC32Q9BV29 185 aa0.08□□□□□ -2.4
RNU4-48P-201ENST00000365559 BOLA2Q9H3K6 86 aa0.08□□□□□ -2.4
RNU4-48P-201ENST00000365559 FKBP11Q9NYL4 201 aa0.08□□□□□ -2.4
RNU4-48P-201ENST00000365559 IL20Q9NYY1 176 aa0.08□□□□□ -2.4
RNU4-48P-201ENST00000365559 MRPL35Q9NZE8 188 aaKnown RBP0.08□□□□□ -2.4
RNU4-48P-201ENST00000365559 LAMTOR2Q9Y2Q5 125 aa0.08□□□□□ -2.4
RNU4-48P-201ENST00000365559 MYH6P13533 1939 aa0.08□□□□□ -2.4
RNU4-48P-201ENST00000365559 MYH8P13535 1937 aa0.08□□□□□ -2.4
RNU4-48P-201ENST00000365559 AKAP11Q9UKA4 1901 aa0.08□□□□□ -2.4
RNU4-48P-201ENST00000365559 KDM6BO15054 1643 aa0.08□□□□□ -2.4
RNU4-48P-201ENST00000365559 ARFGEF1Q9Y6D6 1849 aa0.08□□□□□ -2.4
RNU4-48P-201ENST00000365559 ZNF142P52746 1687 aaPredicted RBP0.08□□□□□ -2.4
RNU4-48P-201ENST00000365559 CACNA1AO00555 2505 aa0.08□□□□□ -2.4
RNU4-48P-201ENST00000365559 NCOR2Q9Y618 2525 aa0.08□□□□□ -2.4
RNU4-48P-201ENST00000365559 CDK5RAP2Q96SN8 1893 aa0.07□□□□□ -2.4
RNU4-48P-201ENST00000365559 MYO7AQ13402 2215 aa0.07□□□□□ -2.4
RNU4-48P-201ENST00000365559 HERC1Q15751 4861 aa0.07□□□□□ -2.4
RNU4-48P-201ENST00000365559 ANKRD17O75179 2603 aaKnown RBP0.07□□□□□ -2.4
RNU4-48P-201ENST00000365559 RYR2Q92736 4967 aa0.07□□□□□ -2.4
RNU4-48P-201ENST00000365559 MYH9P35579 1960 aaKnown RBP0.07□□□□□ -2.4
RNU4-48P-201ENST00000365559 WDR97A6NE52 1622 aa0.07□□□□□ -2.4
RNU4-48P-201ENST00000365559 TRAV13-1A0A0B4J241 112 aa0.07□□□□□ -2.4
RNU4-48P-201ENST00000365559 TMEM30CPA0ZSE6 113 aa0.07□□□□□ -2.4
RNU4-48P-201ENST00000365559 CDC42EP2O14613 210 aa0.07□□□□□ -2.4
RNU4-48P-201ENST00000365559 FAM107AO95990 144 aa0.07□□□□□ -2.4
RNU4-48P-201ENST00000365559 IGF2P01344 180 aa0.07□□□□□ -2.4
RNU4-48P-201ENST00000365559 IL7P13232 177 aa0.07□□□□□ -2.4
RNU4-48P-201ENST00000365559 SRP9P49458 86 aaKnown RBP0.07□□□□□ -2.4
RNU4-48P-201ENST00000365559 GNG10P50151 68 aa0.07□□□□□ -2.4
RNU4-48P-201ENST00000365559 GTF2A1P52655 376 aaPredicted RBP0.07□□□□□ -2.4
RNU4-48P-201ENST00000365559 DNAJB13P59910 316 aa0.07□□□□□ -2.4
RNU4-48P-201ENST00000365559 FXYD3Q14802 87 aa0.07□□□□□ -2.4
RNU4-48P-201ENST00000365559 ZNF56Q15929 161 aa0.07□□□□□ -2.4
RNU4-48P-201ENST00000365559 TMEM78Q5T7P6 136 aa0.07□□□□□ -2.4
RNU4-48P-201ENST00000365559 PPP1R2P3Q6NXS1 205 aa0.07□□□□□ -2.4
RNU4-48P-201ENST00000365559 IZUMO2Q6UXV1 221 aa0.07□□□□□ -2.4
RNU4-48P-201ENST00000365559 C5orf56Q8N8D9 126 aa0.07□□□□□ -2.4
RNU4-48P-201ENST00000365559 OR8J3Q8NGG0 315 aa0.07□□□□□ -2.4
RNU4-48P-201ENST00000365559 OR51A4Q8NGJ6 313 aa0.07□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms