RNA–Protein interactions for RNA: ENST00000361575.3

RPL39-201, Transcript of ribosomal protein L39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPL39, Length 401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39-201ENST00000361575 CIB3Q96Q77 187 aaPredicted RBP1.3□□□□□ -2.2
RPL39-201ENST00000361575 AIF1LQ9BQI0 150 aa1.3□□□□□ -2.2
RPL39-201ENST00000361575 MPC1Q9Y5U8 109 aa1.3□□□□□ -2.2
RPL39-201ENST00000361575 LAMA4Q16363 1823 aa1.3□□□□□ -2.2
RPL39-201ENST00000361575 FGD6Q6ZV73 1430 aa1.3□□□□□ -2.2
RPL39-201ENST00000361575 SPTBP11277 2137 aa1.3□□□□□ -2.2
RPL39-201ENST00000361575 TRAV23DV6A0A075B6W5 121 aa1.29□□□□□ -2.2
RPL39-201ENST00000361575 NCR3O14931 201 aa1.29□□□□□ -2.2
RPL39-201ENST00000361575 CD14P08571 375 aa1.29□□□□□ -2.2
RPL39-201ENST00000361575 C5orf17Q8NAS9 161 aa1.29□□□□□ -2.2
RPL39-201ENST00000361575 ARHGEF10O15013 1369 aa1.29□□□□□ -2.2
RPL39-201ENST00000361575 CTTNBP2Q8WZ74 1663 aa1.29□□□□□ -2.2
RPL39-201ENST00000361575 ZNF727A8MUV8 499 aa1.28□□□□□ -2.2
RPL39-201ENST00000361575 PAEPP09466 180 aa1.28□□□□□ -2.2
RPL39-201ENST00000361575 CCDC153Q494R4 210 aa1.28□□□□□ -2.2
RPL39-201ENST00000361575 IZUMO2Q6UXV1 221 aa1.28□□□□□ -2.2
RPL39-201ENST00000361575 LPAR5Q9H1C0 372 aa1.28□□□□□ -2.2
RPL39-201ENST00000361575 SPANXA1Q9NS26 97 aa1.28□□□□□ -2.2
RPL39-201ENST00000361575 WDR97A6NE52 1622 aa1.28□□□□□ -2.2
RPL39-201ENST00000361575 HELZP42694 1942 aaKnown RBP1.28□□□□□ -2.2
RPL39-201ENST00000361575 TMEM189A5PLL7 270 aa1.27□□□□□ -2.21
RPL39-201ENST00000361575 CMPK1P30085 196 aa1.27□□□□□ -2.21
RPL39-201ENST00000361575 SPATA45Q537H7 98 aa1.27□□□□□ -2.21
RPL39-201ENST00000361575 TCTE3Q8IZS6 198 aa1.27□□□□□ -2.21
RPL39-201ENST00000361575 Q8N6K4 173 aa1.27□□□□□ -2.21
RPL39-201ENST00000361575 OTOSQ8NHW6 89 aa1.27□□□□□ -2.21
RPL39-201ENST00000361575 HSPB8Q9UJY1 196 aa1.27□□□□□ -2.21
RPL39-201ENST00000361575 BORCS7-ASMTA0A0B4J1R7 106 aa1.26□□□□□ -2.21
RPL39-201ENST00000361575 A6NN06 94 aa1.26□□□□□ -2.21
RPL39-201ENST00000361575 OR2H2O95918 312 aa1.26□□□□□ -2.21
RPL39-201ENST00000361575 PDE6GP18545 87 aa1.26□□□□□ -2.21
RPL39-201ENST00000361575 HSD17B12Q53GQ0 312 aa1.26□□□□□ -2.21
RPL39-201ENST00000361575 OCIAD2Q56VL3 154 aa1.26□□□□□ -2.21
RPL39-201ENST00000361575 CSAG1Q6PB30 78 aa1.26□□□□□ -2.21
RPL39-201ENST00000361575 LINC00299Q6ZSB3 139 aa1.26□□□□□ -2.21
RPL39-201ENST00000361575 OR10AC1Q8NH08 325 aa1.26□□□□□ -2.21
RPL39-201ENST00000361575 FCGBPQ9Y6R7 5405 aaPredicted RBP1.26□□□□□ -2.21
RPL39-201ENST00000361575 ZDBF2Q9HCK1 2354 aa1.25□□□□□ -2.21
RPL39-201ENST00000361575 FXYD4P59646 89 aa1.25□□□□□ -2.21
RPL39-201ENST00000361575 PSPHP78330 225 aa1.25□□□□□ -2.21
RPL39-201ENST00000361575 QRFPP83859 136 aa1.25□□□□□ -2.21
RPL39-201ENST00000361575 MORN2Q502X0 79 aa1.25□□□□□ -2.21
RPL39-201ENST00000361575 CDK5RAP2Q96SN8 1893 aa1.24□□□□□ -2.21
RPL39-201ENST00000361575 ARHGAP31Q2M1Z3 1444 aa1.24□□□□□ -2.21
RPL39-201ENST00000361575 GTF2A1P52655 376 aaPredicted RBP1.24□□□□□ -2.21
RPL39-201ENST00000361575 SNRPD3P62318 126 aaKnown RBP1.24□□□□□ -2.21
RPL39-201ENST00000361575 TMEM91Q6ZNR0 172 aa1.24□□□□□ -2.21
RPL39-201ENST00000361575 SPANXCQ9NY87 97 aa1.24□□□□□ -2.21
RPL39-201ENST00000361575 GSKIPQ9P0R6 139 aa1.24□□□□□ -2.21
RPL39-201ENST00000361575 DNAJC15Q9Y5T4 150 aa1.24□□□□□ -2.21
RPL39-201ENST00000361575 CEP152O94986 1710 aa1.23□□□□□ -2.21
RPL39-201ENST00000361575 KDM5CP41229 1560 aa1.23□□□□□ -2.21
RPL39-201ENST00000361575 CDC42EP2O14613 210 aa1.23□□□□□ -2.21
RPL39-201ENST00000361575 EDF1O60869 148 aaKnown RBP1.23□□□□□ -2.21
RPL39-201ENST00000361575 IGHV3-30P01768 117 aa1.23□□□□□ -2.21
RPL39-201ENST00000361575 CD3DP04234 171 aa1.23□□□□□ -2.21
RPL39-201ENST00000361575 IGHV3-30-5P0DP03 117 aa1.23□□□□□ -2.21
RPL39-201ENST00000361575 CKS2P33552 79 aa1.23□□□□□ -2.21
RPL39-201ENST00000361575 ETV6P41212 452 aa1.23□□□□□ -2.21
RPL39-201ENST00000361575 CKS1BP61024 79 aa1.23□□□□□ -2.21
RPL39-201ENST00000361575 TCTEX1D1Q8N7M0 179 aa1.23□□□□□ -2.21
RPL39-201ENST00000361575 BANF2Q9H503 90 aa1.23□□□□□ -2.21
RPL39-201ENST00000361575 KIDINS220Q9ULH0 1771 aa1.22□□□□□ -2.21
RPL39-201ENST00000361575 IFITM5A6NNB3 132 aa1.22□□□□□ -2.21
RPL39-201ENST00000361575 DBIP07108 87 aaKnown RBP1.22□□□□□ -2.21
RPL39-201ENST00000361575 DNAJB13P59910 316 aa1.22□□□□□ -2.21
RPL39-201ENST00000361575 PCBD1P61457 104 aa1.22□□□□□ -2.21
RPL39-201ENST00000361575 LSM3P62310 102 aaKnown RBP1.22□□□□□ -2.21
RPL39-201ENST00000361575 ASB16-AS1Q495Z4 193 aa1.22□□□□□ -2.21
RPL39-201ENST00000361575 CCSMST1Q4G0I0 132 aa1.22□□□□□ -2.21
RPL39-201ENST00000361575 OR4S1Q8NGB4 309 aa1.22□□□□□ -2.21
RPL39-201ENST00000361575 KRTAP4-1Q9BYQ7 146 aa1.22□□□□□ -2.21
RPL39-201ENST00000361575 CALML5Q9NZT1 146 aa1.22□□□□□ -2.21
RPL39-201ENST00000361575 METTL1Q9UBP6 276 aaKnown RBP1.22□□□□□ -2.21
RPL39-201ENST00000361575 A0A1W2PPB8 328 aa1.21□□□□□ -2.22
RPL39-201ENST00000361575 A0A1W2PRS3 328 aa1.21□□□□□ -2.22
RPL39-201ENST00000361575 KIR3DP1A8MWS1 328 aa1.21□□□□□ -2.22
RPL39-201ENST00000361575 AKR1D1P51857 326 aa1.21□□□□□ -2.22
RPL39-201ENST00000361575 HIST1H1AQ02539 215 aaPredicted RBP1.21□□□□□ -2.22
RPL39-201ENST00000361575 COMMD3Q9UBI1 195 aa1.21□□□□□ -2.22
RPL39-201ENST00000361575 SYNJ1O43426 1573 aa1.21□□□□□ -2.22
RPL39-201ENST00000361575 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.2□□□□□ -2.22
RPL39-201ENST00000361575 IGHV1-24A0A0C4DH33 117 aa1.2□□□□□ -2.22
RPL39-201ENST00000361575 BBIP1A8MTZ0 92 aa1.2□□□□□ -2.22
RPL39-201ENST00000361575 HLA-DRB4P13762 266 aa1.2□□□□□ -2.22
RPL39-201ENST00000361575 RPL37AP61513 92 aaKnown RBP1.2□□□□□ -2.22
RPL39-201ENST00000361575 C10orf111Q8N326 155 aa1.2□□□□□ -2.22
RPL39-201ENST00000361575 MAFIPQ8WZ33 124 aa1.2□□□□□ -2.22
RPL39-201ENST00000361575 AP1S3Q96PC3 154 aa1.2□□□□□ -2.22
RPL39-201ENST00000361575 SMIM7Q9BQ49 75 aa1.2□□□□□ -2.22
RPL39-201ENST00000361575 HLA-DRB4X5D2U9 266 aa1.2□□□□□ -2.22
RPL39-201ENST00000361575 VIRMAQ69YN4 1812 aaKnown RBP1.19□□□□□ -2.22
RPL39-201ENST00000361575 FHAD1B1AJZ9 1412 aa1.19□□□□□ -2.22
RPL39-201ENST00000361575 HIST1H1BP16401 226 aaKnown RBP1.19□□□□□ -2.22
RPL39-201ENST00000361575 PRB3Q04118 309 aaPredicted RBP1.19□□□□□ -2.22
RPL39-201ENST00000361575 PTPRGP23470 1445 aa1.18□□□□□ -2.22
RPL39-201ENST00000361575 NUPR2A6NF83 97 aa1.18□□□□□ -2.22
RPL39-201ENST00000361575 SULT1C4O75897 302 aa1.18□□□□□ -2.22
RPL39-201ENST00000361575 IGKCP01834 107 aa1.18□□□□□ -2.22
RPL39-201ENST00000361575 LINC00575Q6W349 94 aa1.18□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms