RNA–Protein interactions for RNA: ENST00000359785.9

PTPN22-201, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PTPN22, Length 3,654 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-201ENST00000359785 ABCA7Q8IZY2 2146 aa3.43□□□□□ -1.86
PTPN22-201ENST00000359785 ZNF808Q8N4W9 903 aaPredicted RBP3.43□□□□□ -1.86
PTPN22-201ENST00000359785 BUB3O43684 328 aa3.43□□□□□ -1.86
PTPN22-201ENST00000359785 IL4P05112 153 aa3.43□□□□□ -1.86
PTPN22-201ENST00000359785 EGR2P11161 476 aaPredicted RBP3.43□□□□□ -1.86
PTPN22-201ENST00000359785 RPL7P18124 248 aaKnown RBP3.43□□□□□ -1.86
PTPN22-201ENST00000359785 GNG5P63218 68 aa3.43□□□□□ -1.86
PTPN22-201ENST00000359785 SMAD5-AS1Q9Y6J3 95 aa3.43□□□□□ -1.86
PTPN22-201ENST00000359785 TMEM223A0PJW6 202 aa3.43□□□□□ -1.86
PTPN22-201ENST00000359785 M0R1W7 72 aa3.43□□□□□ -1.86
PTPN22-201ENST00000359785 LST1O00453 97 aa3.43□□□□□ -1.86
PTPN22-201ENST00000359785 UQCRQO14949 82 aa3.43□□□□□ -1.86
PTPN22-201ENST00000359785 TCL1BO95988 128 aa3.43□□□□□ -1.86
PTPN22-201ENST00000359785 TIMM21Q9BVV7 248 aa3.43□□□□□ -1.86
PTPN22-201ENST00000359785 TECTAO75443 2155 aa3.42□□□□□ -1.86
PTPN22-201ENST00000359785 TSHBP01222 138 aa3.42□□□□□ -1.86
PTPN22-201ENST00000359785 ATXN8Q156A1 80 aa3.42□□□□□ -1.86
PTPN22-201ENST00000359785 MSMPQ1L6U9 139 aa3.42□□□□□ -1.86
PTPN22-201ENST00000359785 RSPO4Q2I0M5 234 aaPredicted RBP3.42□□□□□ -1.86
PTPN22-201ENST00000359785 LINC00696Q6ZRV3 163 aa3.42□□□□□ -1.86
PTPN22-201ENST00000359785 TEX29Q8N6K0 151 aa3.42□□□□□ -1.86
PTPN22-201ENST00000359785 MRAPQ8TCY5 172 aa3.42□□□□□ -1.86
PTPN22-201ENST00000359785 IGHG2P01859 326 aa3.42□□□□□ -1.86
PTPN22-201ENST00000359785 CSN3P07498 182 aa3.42□□□□□ -1.86
PTPN22-201ENST00000359785 PPIFP30405 207 aaKnown RBP3.42□□□□□ -1.86
PTPN22-201ENST00000359785 ZC2HC1BQ5TFG8 222 aa3.42□□□□□ -1.86
PTPN22-201ENST00000359785 HES3Q5TGS1 186 aa3.42□□□□□ -1.86
PTPN22-201ENST00000359785 ANKRD29Q8N6D5 301 aa3.42□□□□□ -1.86
PTPN22-201ENST00000359785 THAP3Q8WTV1 239 aaPredicted RBP3.42□□□□□ -1.86
PTPN22-201ENST00000359785 RNF125Q96EQ8 232 aa3.42□□□□□ -1.86
PTPN22-201ENST00000359785 MSRB2Q9Y3D2 182 aa3.42□□□□□ -1.86
PTPN22-201ENST00000359785 PI4KAP42356 2102 aa3.42□□□□□ -1.86
PTPN22-201ENST00000359785 TRAV17A0A0B4J275 112 aa3.42□□□□□ -1.86
PTPN22-201ENST00000359785 TRACP01848 142 aa3.42□□□□□ -1.86
PTPN22-201ENST00000359785 RPL27AP46776 148 aaKnown RBP3.42□□□□□ -1.86
PTPN22-201ENST00000359785 TMEM258P61165 79 aa3.42□□□□□ -1.86
PTPN22-201ENST00000359785 MRPS36P82909 103 aaKnown RBP3.42□□□□□ -1.86
PTPN22-201ENST00000359785 SHISA2Q6UWI4 295 aa3.42□□□□□ -1.86
PTPN22-201ENST00000359785 PRO1854Q9UHT4 67 aa3.42□□□□□ -1.86
PTPN22-201ENST00000359785 HSPB6O14558 160 aa3.41□□□□□ -1.86
PTPN22-201ENST00000359785 SCGB2A1O75556 95 aa3.41□□□□□ -1.86
PTPN22-201ENST00000359785 IGHV1-46P01743 117 aa3.41□□□□□ -1.86
PTPN22-201ENST00000359785 ASPHD1Q5U4P2 390 aa3.41□□□□□ -1.86
PTPN22-201ENST00000359785 ATP5EP2Q5VTU8 51 aa3.41□□□□□ -1.86
PTPN22-201ENST00000359785 RUSC1-AS1Q66K80 236 aa3.41□□□□□ -1.86
PTPN22-201ENST00000359785 SRSF12Q8WXF0 261 aaKnown RBP3.41□□□□□ -1.86
PTPN22-201ENST00000359785 PRADC1Q9BSG0 188 aa3.41□□□□□ -1.86
PTPN22-201ENST00000359785 C21orf62Q9NYP8 219 aa3.41□□□□□ -1.86
PTPN22-201ENST00000359785 MRPL35Q9NZE8 188 aaKnown RBP3.41□□□□□ -1.86
PTPN22-201ENST00000359785 GNG12Q9UBI6 72 aa3.41□□□□□ -1.86
PTPN22-201ENST00000359785 CHD9Q3L8U1 2897 aa3.41□□□□□ -1.86
PTPN22-201ENST00000359785 IGKV3D-20A0A0C4DH25 116 aa3.41□□□□□ -1.86
PTPN22-201ENST00000359785 PF4P02776 101 aa3.41□□□□□ -1.86
PTPN22-201ENST00000359785 IGHV1-8P0DP01 117 aa3.41□□□□□ -1.86
PTPN22-201ENST00000359785 LEPP41159 167 aa3.41□□□□□ -1.86
PTPN22-201ENST00000359785 ZNF138P52744 262 aa3.41□□□□□ -1.86
PTPN22-201ENST00000359785 ETDBQ3ZM63 59 aa3.41□□□□□ -1.86
PTPN22-201ENST00000359785 FBXL19-AS1Q494R0 122 aa3.41□□□□□ -1.86
PTPN22-201ENST00000359785 LINC00643Q86TS7 51 aa3.41□□□□□ -1.86
PTPN22-201ENST00000359785 GTSCR1Q86UQ5 136 aa3.41□□□□□ -1.86
PTPN22-201ENST00000359785 C3orf22Q8N5N4 141 aa3.41□□□□□ -1.86
PTPN22-201ENST00000359785 FAM104AQ969W3 186 aa3.41□□□□□ -1.86
PTPN22-201ENST00000359785 PLEKHB2Q96CS7 222 aa3.41□□□□□ -1.86
PTPN22-201ENST00000359785 TIMD4Q96H15 378 aa3.41□□□□□ -1.86
PTPN22-201ENST00000359785 SGK494Q96LW2 274 aa3.41□□□□□ -1.86
PTPN22-201ENST00000359785 C9orf85Q96MD7 179 aa3.41□□□□□ -1.86
PTPN22-201ENST00000359785 FANCD2OSQ96PS1 177 aa3.41□□□□□ -1.86
PTPN22-201ENST00000359785 ANAPC13Q9BS18 74 aa3.41□□□□□ -1.86
PTPN22-201ENST00000359785 C22orf24Q9Y442 160 aa3.41□□□□□ -1.86
PTPN22-201ENST00000359785 A0A1W2PNU3 283 aaPredicted RBP3.41□□□□□ -1.86
PTPN22-201ENST00000359785 KLLNB2CW77 178 aa3.41□□□□□ -1.86
PTPN22-201ENST00000359785 TMEM178BH3BS89 294 aa3.41□□□□□ -1.86
PTPN22-201ENST00000359785 CAMPP49913 170 aa3.41□□□□□ -1.86
PTPN22-201ENST00000359785 INSL3P51460 131 aa3.41□□□□□ -1.86
PTPN22-201ENST00000359785 MINOS1Q5TGZ0 78 aa3.41□□□□□ -1.86
PTPN22-201ENST00000359785 FAM53AQ6NSI3 398 aaPredicted RBP3.41□□□□□ -1.86
PTPN22-201ENST00000359785 HINT2Q9BX68 163 aa3.41□□□□□ -1.86
PTPN22-201ENST00000359785 NHP2Q9NX24 153 aaKnown RBP3.41□□□□□ -1.86
PTPN22-201ENST00000359785 MINOS1-NBL1R4GNA1 71 aa3.41□□□□□ -1.86
PTPN22-201ENST00000359785 TRAV8-2A0A0B4J237 113 aa3.4□□□□□ -1.86
PTPN22-201ENST00000359785 CLPSL1A2RUU4 121 aa3.4□□□□□ -1.86
PTPN22-201ENST00000359785 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa3.4□□□□□ -1.86
PTPN22-201ENST00000359785 RBMXL3Q8N7X1 1067 aaKnown RBP3.4□□□□□ -1.86
PTPN22-201ENST00000359785 FAM110DQ8TAY7 271 aaPredicted RBP3.4□□□□□ -1.86
PTPN22-201ENST00000359785 OVOL2Q9BRP0 275 aa3.4□□□□□ -1.86
PTPN22-201ENST00000359785 CSDC2Q9Y534 153 aaKnown RBP3.4□□□□□ -1.86
PTPN22-201ENST00000359785 TRGV5A0A0B4J1U4 118 aa3.4□□□□□ -1.87
PTPN22-201ENST00000359785 TRAV2A0A0B4J234 112 aa3.4□□□□□ -1.87
PTPN22-201ENST00000359785 TRAV25A0A0B4J276 109 aa3.4□□□□□ -1.87
PTPN22-201ENST00000359785 CKS2P33552 79 aa3.4□□□□□ -1.87
PTPN22-201ENST00000359785 ZNF80P51504 273 aaPredicted RBP3.4□□□□□ -1.87
PTPN22-201ENST00000359785 LINC01620Q4KN68 170 aa3.4□□□□□ -1.87
PTPN22-201ENST00000359785 ZNF318Q5VUA4 2279 aa3.4□□□□□ -1.87
PTPN22-201ENST00000359785 BUB1B-PAK6H3BSN5 160 aa3.4□□□□□ -1.87
PTPN22-201ENST00000359785 SLC25A20O43772 301 aa3.4□□□□□ -1.87
PTPN22-201ENST00000359785 SCGB1C2P0DMR2 95 aa3.4□□□□□ -1.87
PTPN22-201ENST00000359785 HERVK_113P61574 105 aa3.4□□□□□ -1.87
PTPN22-201ENST00000359785 PMVKQ15126 192 aa3.4□□□□□ -1.87
PTPN22-201ENST00000359785 LINC01561Q8N1V8 128 aa3.4□□□□□ -1.87
PTPN22-201ENST00000359785 DPH3P1Q9H4G8 78 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 123.8 ms