RNA–Protein interactions for RNA: ENST00000349124.2

PTP4A3-202, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 1 (best) BASIC

Gene PTP4A3, Length 2,710 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-202ENST00000349124 JMJD8Q96S16 334 aa13.89□□□□□ -0.19
PTP4A3-202ENST00000349124 A1L4Q6 167 aa13.89□□□□□ -0.19
PTP4A3-202ENST00000349124 GOSR1O95249 250 aa13.89□□□□□ -0.19
PTP4A3-202ENST00000349124 KLRB1Q12918 225 aa13.89□□□□□ -0.19
PTP4A3-202ENST00000349124 LINC01559Q495D7 138 aa13.89□□□□□ -0.19
PTP4A3-202ENST00000349124 CNFNQ9BYD5 112 aa13.89□□□□□ -0.19
PTP4A3-202ENST00000349124 BPESC1Q9GZL8 116 aa13.89□□□□□ -0.19
PTP4A3-202ENST00000349124 FBLL1A6NHQ2 334 aaKnown RBP13.88□□□□□ -0.19
PTP4A3-202ENST00000349124 PRSS1P07477 247 aa13.88□□□□□ -0.19
PTP4A3-202ENST00000349124 ADAMTSL5Q6ZMM2 481 aa13.88□□□□□ -0.19
PTP4A3-202ENST00000349124 PEF1Q9UBV8 284 aaKnown RBP13.88□□□□□ -0.19
PTP4A3-202ENST00000349124 GAGE12BA1L429 117 aa13.88□□□□□ -0.19
PTP4A3-202ENST00000349124 SCGB2A1O75556 95 aa13.88□□□□□ -0.19
PTP4A3-202ENST00000349124 UBE2E1P51965 193 aa13.88□□□□□ -0.19
PTP4A3-202ENST00000349124 OR1N2Q8NGR9 330 aa13.88□□□□□ -0.19
PTP4A3-202ENST00000349124 TMEM158Q8WZ71 300 aa13.88□□□□□ -0.19
PTP4A3-202ENST00000349124 H3BUT2 72 aa13.87□□□□□ -0.19
PTP4A3-202ENST00000349124 KIR3DS1Q14943 382 aa13.87□□□□□ -0.19
PTP4A3-202ENST00000349124 C8orf86Q6ZUL3 223 aa13.87□□□□□ -0.19
PTP4A3-202ENST00000349124 DPF1Q92782 380 aa13.87□□□□□ -0.19
PTP4A3-202ENST00000349124 HHLA3Q9XRX5 114 aa13.87□□□□□ -0.19
PTP4A3-202ENST00000349124 CENPVL3A0A0U1RRI6 287 aa13.86□□□□□ -0.19
PTP4A3-202ENST00000349124 CDKN1BP46527 198 aa13.86□□□□□ -0.19
PTP4A3-202ENST00000349124 SEC11AP67812 179 aa13.86□□□□□ -0.19
PTP4A3-202ENST00000349124 ODF1Q14990 250 aa13.86□□□□□ -0.19
PTP4A3-202ENST00000349124 UFC1Q9Y3C8 167 aa13.86□□□□□ -0.19
PTP4A3-202ENST00000349124 FCER1GP30273 86 aa13.86□□□□□ -0.19
PTP4A3-202ENST00000349124 OCIAD2Q56VL3 154 aa13.86□□□□□ -0.19
PTP4A3-202ENST00000349124 PRSS47A8MTI9 375 aa13.85□□□□□ -0.19
PTP4A3-202ENST00000349124 K7EMI3 77 aa13.85□□□□□ -0.19
PTP4A3-202ENST00000349124 LMO4P61968 165 aa13.85□□□□□ -0.19
PTP4A3-202ENST00000349124 PRR9Q5T870 116 aa13.85□□□□□ -0.19
PTP4A3-202ENST00000349124 IGHV7-4-1A0A0J9YVY3 117 aa13.85□□□□□ -0.19
PTP4A3-202ENST00000349124 GTSCR1Q86UQ5 136 aa13.85□□□□□ -0.19
PTP4A3-202ENST00000349124 FOXC2Q99958 501 aa13.85□□□□□ -0.19
PTP4A3-202ENST00000349124 GAGE10A6NGK3 116 aa13.84□□□□□ -0.19
PTP4A3-202ENST00000349124 PPBPP02775 128 aa13.84□□□□□ -0.19
PTP4A3-202ENST00000349124 SRSF2Q01130 221 aaKnown RBP13.84□□□□□ -0.19
PTP4A3-202ENST00000349124 TMEM78Q5T7P6 136 aa13.84□□□□□ -0.19
PTP4A3-202ENST00000349124 OR2K2Q8NGT1 345 aa13.84□□□□□ -0.19
PTP4A3-202ENST00000349124 IGLV2-18A0A075B6J9 118 aa13.84□□□□□ -0.19
PTP4A3-202ENST00000349124 TRBV12-3P01733 135 aa13.84□□□□□ -0.19
PTP4A3-202ENST00000349124 C20orf173Q96LM9 149 aa13.84□□□□□ -0.19
PTP4A3-202ENST00000349124 METTL26Q96S19 204 aa13.84□□□□□ -0.19
PTP4A3-202ENST00000349124 C9orf118A6NHY6 69 aa13.83□□□□□ -0.2
PTP4A3-202ENST00000349124 SAP30O75446 220 aa13.83□□□□□ -0.2
PTP4A3-202ENST00000349124 LY6DQ14210 128 aa13.83□□□□□ -0.2
PTP4A3-202ENST00000349124 EEF1AKMT3Q96AZ1 226 aa13.83□□□□□ -0.2
PTP4A3-202ENST00000349124 SLC50A1Q9BRV3 221 aa13.83□□□□□ -0.2
PTP4A3-202ENST00000349124 NXT2Q9NPJ8 142 aaKnown RBP13.83□□□□□ -0.2
PTP4A3-202ENST00000349124 CELSR2Q9HCU4 2923 aa13.83□□□□□ -0.2
PTP4A3-202ENST00000349124 RBAKDNA6NC62 111 aa13.82□□□□□ -0.2
PTP4A3-202ENST00000349124 NPFFO15130 113 aa13.82□□□□□ -0.2
PTP4A3-202ENST00000349124 SMIM17P0DL12 118 aa13.82□□□□□ -0.2
PTP4A3-202ENST00000349124 HSD52Q0P140 79 aa13.82□□□□□ -0.2
PTP4A3-202ENST00000349124 UNQ9165/PRO28630Q6UXU0 137 aa13.82□□□□□ -0.2
PTP4A3-202ENST00000349124 BRD3OSQ6XYD6 125 aa13.82□□□□□ -0.2
PTP4A3-202ENST00000349124 C5orf56Q8N8D9 126 aa13.82□□□□□ -0.2
PTP4A3-202ENST00000349124 TMEM160Q9NX00 188 aa13.82□□□□□ -0.2
PTP4A3-202ENST00000349124 H3BRM9 83 aa13.82□□□□□ -0.2
PTP4A3-202ENST00000349124 OR9G4Q8NGQ1 327 aa13.82□□□□□ -0.2
PTP4A3-202ENST00000349124 TRAV40A0A0B4J280 105 aa13.81□□□□□ -0.2
PTP4A3-202ENST00000349124 TMEM8BA6NDV4 472 aa13.81□□□□□ -0.2
PTP4A3-202ENST00000349124 LINC01546A6NGU7 62 aa13.81□□□□□ -0.2
PTP4A3-202ENST00000349124 H3BVH4 76 aa13.81□□□□□ -0.2
PTP4A3-202ENST00000349124 EFNA4P52798 201 aa13.81□□□□□ -0.2
PTP4A3-202ENST00000349124 NRACQ8N912 160 aa13.81□□□□□ -0.2
PTP4A3-202ENST00000349124 C16orf92Q96LL3 132 aa13.81□□□□□ -0.2
PTP4A3-202ENST00000349124 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.81□□□□□ -0.29e-7■■■□□ 16.3
PTP4A3-202ENST00000349124 ITPR1Q14643 2758 aa13.81□□□□□ -0.2
PTP4A3-202ENST00000349124 A0A0G2JLM5 398 aa13.81□□□□□ -0.2
PTP4A3-202ENST00000349124 SPANXN1Q5VSR9 72 aa13.81□□□□□ -0.2
PTP4A3-202ENST00000349124 ZMAT4Q9H898 229 aa13.81□□□□□ -0.2
PTP4A3-202ENST00000349124 IGKV3-7A0A075B6H7 116 aa13.8□□□□□ -0.2
PTP4A3-202ENST00000349124 A6NDN8 102 aa13.8□□□□□ -0.2
PTP4A3-202ENST00000349124 RAB9AP51151 201 aa13.8□□□□□ -0.2
PTP4A3-202ENST00000349124 FXYD2P54710 66 aa13.8□□□□□ -0.2
PTP4A3-202ENST00000349124 ATP5G2Q06055 141 aa13.8□□□□□ -0.2
PTP4A3-202ENST00000349124 ZC2HC1BQ5TFG8 222 aa13.8□□□□□ -0.2
PTP4A3-202ENST00000349124 Q8N8P6 123 aa13.8□□□□□ -0.2
PTP4A3-202ENST00000349124 SVIPQ8NHG7 77 aa13.8□□□□□ -0.2
PTP4A3-202ENST00000349124 AP1S3Q96PC3 154 aa13.8□□□□□ -0.2
PTP4A3-202ENST00000349124 GCSHP23434 173 aa13.8□□□□□ -0.2
PTP4A3-202ENST00000349124 VPS25Q9BRG1 176 aa13.8□□□□□ -0.2
PTP4A3-202ENST00000349124 MRPL35Q9NZE8 188 aaKnown RBP13.8□□□□□ -0.2
PTP4A3-202ENST00000349124 C19orf84I3L1E1 186 aa13.79□□□□□ -0.2
PTP4A3-202ENST00000349124 IGKCP01834 107 aa13.79□□□□□ -0.2
PTP4A3-202ENST00000349124 UFSP1Q6NVU6 142 aa13.79□□□□□ -0.2
PTP4A3-202ENST00000349124 S100A7P31151 101 aa13.79□□□□□ -0.2
PTP4A3-202ENST00000349124 OR4X2Q8NGF9 303 aa13.79□□□□□ -0.2
PTP4A3-202ENST00000349124 U3KQE9 123 aa13.79□□□□□ -0.2
PTP4A3-202ENST00000349124 TRBV7-1A0A0A6YYK4 115 aa13.78□□□□□ -0.2
PTP4A3-202ENST00000349124 K7ERJ3 54 aa13.78□□□□□ -0.2
PTP4A3-202ENST00000349124 SIVA1O15304 175 aa13.78□□□□□ -0.2
PTP4A3-202ENST00000349124 LCNL1Q6ZST4 164 aa13.78□□□□□ -0.2
PTP4A3-202ENST00000349124 CRYBG3Q68DQ2 2970 aa13.78□□□□□ -0.2
PTP4A3-202ENST00000349124 C9orf47Q6ZRZ4 202 aa13.78□□□□□ -0.2
PTP4A3-202ENST00000349124 MAPKAPK5-AS1Q8N8E1 139 aa13.78□□□□□ -0.2
PTP4A3-202ENST00000349124 PIFOQ8TCI5 191 aa13.78□□□□□ -0.2
PTP4A3-202ENST00000349124 KLK15Q9H2R5 256 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms