RNA–Protein interactions for RNA: ENST00000345111.3

LINC00943-201, long intergenic non-protein coding RNA 943, humanhuman

TSL 2

Gene LINC00943, Length 2,126 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00943-201ENST00000345111 TMEM105Q8N8V8 129 aa6.2□□□□□ -1.42
LINC00943-201ENST00000345111 AJUBAQ96IF1 538 aa6.2□□□□□ -1.42
LINC00943-201ENST00000345111 DNAJC13O75165 2243 aa6.2□□□□□ -1.42
LINC00943-201ENST00000345111 KNTC1P50748 2209 aa6.2□□□□□ -1.42
LINC00943-201ENST00000345111 IGHV3-72A0A0B4J1Y9 119 aa6.2□□□□□ -1.42
LINC00943-201ENST00000345111 IFITM1P13164 125 aa6.2□□□□□ -1.42
LINC00943-201ENST00000345111 RPL32P62910 135 aaKnown RBP6.2□□□□□ -1.42
LINC00943-201ENST00000345111 ERCC8Q13216 396 aa6.2□□□□□ -1.42
LINC00943-201ENST00000345111 PRR30Q53SZ7 412 aaPredicted RBP6.2□□□□□ -1.42
LINC00943-201ENST00000345111 SHISA2Q6UWI4 295 aa6.2□□□□□ -1.42
LINC00943-201ENST00000345111 SCGB1D4Q6XE38 83 aa6.2□□□□□ -1.42
LINC00943-201ENST00000345111 TDHQ8IZJ6 230 aa6.2□□□□□ -1.42
LINC00943-201ENST00000345111 C10orf126Q8N4M7 172 aa6.2□□□□□ -1.42
LINC00943-201ENST00000345111 SCGB3A1Q96QR1 104 aa6.2□□□□□ -1.42
LINC00943-201ENST00000345111 SMIM2Q9BVW6 85 aa6.2□□□□□ -1.42
LINC00943-201ENST00000345111 SIT1Q9Y3P8 196 aa6.2□□□□□ -1.42
LINC00943-201ENST00000345111 COL27A1Q8IZC6 1860 aaPredicted RBP6.2□□□□□ -1.42
LINC00943-201ENST00000345111 PRR14LQ5THK1 2151 aa6.19□□□□□ -1.42
LINC00943-201ENST00000345111 EFNA4P52798 201 aa6.19□□□□□ -1.42
LINC00943-201ENST00000345111 TTC32Q5I0X7 151 aa6.19□□□□□ -1.42
LINC00943-201ENST00000345111 PAPPA-AS1Q5QFB9 102 aa6.19□□□□□ -1.42
LINC00943-201ENST00000345111 Q8TAT8 98 aa6.19□□□□□ -1.42
LINC00943-201ENST00000345111 SLC50A1Q9BRV3 221 aa6.19□□□□□ -1.42
LINC00943-201ENST00000345111 ZNF576Q9H609 170 aa6.19□□□□□ -1.42
LINC00943-201ENST00000345111 IGHV1-3A0A0C4DH29 117 aa6.19□□□□□ -1.42
LINC00943-201ENST00000345111 PATE3B3GLJ2 98 aa6.19□□□□□ -1.42
LINC00943-201ENST00000345111 HLA-DMBP28068 263 aa6.19□□□□□ -1.42
LINC00943-201ENST00000345111 LOXP28300 417 aaPredicted RBP6.19□□□□□ -1.42
LINC00943-201ENST00000345111 MFAP4P55083 255 aa6.19□□□□□ -1.42
LINC00943-201ENST00000345111 HERV-K104P63124 156 aa6.19□□□□□ -1.42
LINC00943-201ENST00000345111 MRPL23Q16540 153 aaKnown RBP6.19□□□□□ -1.42
LINC00943-201ENST00000345111 NUP37Q8NFH4 326 aa6.19□□□□□ -1.42
LINC00943-201ENST00000345111 KAAG1Q9UBP8 84 aa6.19□□□□□ -1.42
LINC00943-201ENST00000345111 MBD3L4A6NDZ8 208 aaPredicted RBP6.18□□□□□ -1.42
LINC00943-201ENST00000345111 MBD3L3A6NE82 208 aaPredicted RBP6.18□□□□□ -1.42
LINC00943-201ENST00000345111 MBD3L5A6NJ08 208 aaPredicted RBP6.18□□□□□ -1.42
LINC00943-201ENST00000345111 TMEM178BH3BS89 294 aa6.18□□□□□ -1.42
LINC00943-201ENST00000345111 SLC25A20O43772 301 aa6.18□□□□□ -1.42
LINC00943-201ENST00000345111 IGLV1-47P01700 117 aa6.18□□□□□ -1.42
LINC00943-201ENST00000345111 TRGV3P03979 118 aa6.18□□□□□ -1.42
LINC00943-201ENST00000345111 HERVK_113P61574 105 aa6.18□□□□□ -1.42
LINC00943-201ENST00000345111 GFRALQ6UXV0 394 aa6.18□□□□□ -1.42
LINC00943-201ENST00000345111 MBD3L2Q8NHZ7 208 aaPredicted RBP6.18□□□□□ -1.42
LINC00943-201ENST00000345111 IGFBPL1Q8WX77 278 aa6.18□□□□□ -1.42
LINC00943-201ENST00000345111 KIR2DL4Q99706 377 aa6.18□□□□□ -1.42
LINC00943-201ENST00000345111 RAI1Q7Z5J4 1906 aaPredicted RBP6.18□□□□□ -1.42
LINC00943-201ENST00000345111 NAV3Q8IVL0 2385 aa6.18□□□□□ -1.42
LINC00943-201ENST00000345111 IGKV3D-20A0A0C4DH25 116 aa6.17□□□□□ -1.42
LINC00943-201ENST00000345111 A0A0J9YY99 117 aa6.17□□□□□ -1.42
LINC00943-201ENST00000345111 LINC01548A6NM66 108 aa6.17□□□□□ -1.42
LINC00943-201ENST00000345111 SCGB2A1O75556 95 aa6.17□□□□□ -1.42
LINC00943-201ENST00000345111 CFC1BP0CG36 223 aa6.17□□□□□ -1.42
LINC00943-201ENST00000345111 CFC1P0CG37 223 aa6.17□□□□□ -1.42
LINC00943-201ENST00000345111 P0DMU3 169 aa6.17□□□□□ -1.42
LINC00943-201ENST00000345111 FAM231AP0DMU4 169 aa6.17□□□□□ -1.42
LINC00943-201ENST00000345111 FAM231CP0DMU5 169 aa6.17□□□□□ -1.42
LINC00943-201ENST00000345111 PRB4P10163 310 aaPredicted RBP6.17□□□□□ -1.42
LINC00943-201ENST00000345111 RPL13AP40429 203 aaKnown RBP6.17□□□□□ -1.42
LINC00943-201ENST00000345111 BAALCQ8WXS3 180 aa6.17□□□□□ -1.42
LINC00943-201ENST00000345111 CFHR4Q92496 578 aa6.17□□□□□ -1.42
LINC00943-201ENST00000345111 PLEKHB2Q96CS7 222 aa6.17□□□□□ -1.42
LINC00943-201ENST00000345111 VKORC1Q9BQB6 163 aa6.17□□□□□ -1.42
LINC00943-201ENST00000345111 PRO1854Q9UHT4 67 aa6.17□□□□□ -1.42
LINC00943-201ENST00000345111 SDK1Q7Z5N4 2213 aa6.17□□□□□ -1.42
LINC00943-201ENST00000345111 TRAV8-2A0A0B4J237 113 aa6.17□□□□□ -1.42
LINC00943-201ENST00000345111 IGHV7-4-1A0A0J9YVY3 117 aa6.17□□□□□ -1.42
LINC00943-201ENST00000345111 A0A1W2PNU3 283 aaPredicted RBP6.17□□□□□ -1.42
LINC00943-201ENST00000345111 C17orf100A8MU93 164 aa6.17□□□□□ -1.42
LINC00943-201ENST00000345111 CCDC179H3BU77 68 aa6.17□□□□□ -1.42
LINC00943-201ENST00000345111 H3BVH4 76 aa6.17□□□□□ -1.42
LINC00943-201ENST00000345111 CNIH1O95406 144 aa6.17□□□□□ -1.42
LINC00943-201ENST00000345111 IGHV3-30P01768 117 aa6.17□□□□□ -1.42
LINC00943-201ENST00000345111 IGHV3-30-5P0DP03 117 aa6.17□□□□□ -1.42
LINC00943-201ENST00000345111 SLC25A29Q8N8R3 303 aa6.17□□□□□ -1.42
LINC00943-201ENST00000345111 RASL10AQ92737 203 aa6.17□□□□□ -1.42
LINC00943-201ENST00000345111 TNFRSF18Q9Y5U5 241 aa6.17□□□□□ -1.42
LINC00943-201ENST00000345111 SMAD5-AS1Q9Y6J3 95 aa6.17□□□□□ -1.42
LINC00943-201ENST00000345111 CFAP54Q96N23 3096 aa6.17□□□□□ -1.42
LINC00943-201ENST00000345111 BUB1B-PAK6H3BSN5 160 aa6.16□□□□□ -1.42
LINC00943-201ENST00000345111 ZNF883P0CG24 379 aa6.16□□□□□ -1.42
LINC00943-201ENST00000345111 CCL8P80075 99 aa6.16□□□□□ -1.42
LINC00943-201ENST00000345111 DYNAPQ8N1N2 210 aa6.16□□□□□ -1.42
LINC00943-201ENST00000345111 SMIM20Q8N5G0 67 aa6.16□□□□□ -1.42
LINC00943-201ENST00000345111 OR10J6PQ8NGY7 276 aa6.16□□□□□ -1.42
LINC00943-201ENST00000345111 IGLV11-55A0A075B6I3 123 aa6.16□□□□□ -1.42
LINC00943-201ENST00000345111 TRAV4A0A0B4J268 109 aa6.16□□□□□ -1.42
LINC00943-201ENST00000345111 M0R381 172 aa6.16□□□□□ -1.42
LINC00943-201ENST00000345111 ARL3P36405 182 aa6.16□□□□□ -1.42
LINC00943-201ENST00000345111 SUMO2P61956 95 aaKnown RBP6.16□□□□□ -1.42
LINC00943-201ENST00000345111 LYPD2Q6UXB3 125 aa6.16□□□□□ -1.42
LINC00943-201ENST00000345111 RNF152Q8N8N0 203 aa6.16□□□□□ -1.42
LINC00943-201ENST00000345111 MAFAQ8NHW3 353 aaPredicted RBP6.16□□□□□ -1.42
LINC00943-201ENST00000345111 MRPL53Q96EL3 112 aaKnown RBP6.16□□□□□ -1.42
LINC00943-201ENST00000345111 TIMD4Q96H15 378 aa6.16□□□□□ -1.42
LINC00943-201ENST00000345111 TMEM126AQ9H061 195 aa6.16□□□□□ -1.42
LINC00943-201ENST00000345111 HIF1ANQ9NWT6 349 aa6.16□□□□□ -1.42
LINC00943-201ENST00000345111 MDFICQ9P1T7 246 aa6.16□□□□□ -1.42
LINC00943-201ENST00000345111 ONECUT1Q9UBC0 465 aa6.16□□□□□ -1.42
LINC00943-201ENST00000345111 CTSZQ9UBR2 303 aa6.16□□□□□ -1.42
LINC00943-201ENST00000345111 MYO15AQ9UKN7 3530 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms