RNA–Protein interactions for RNA: ENST00000342075.8

PMS1-201, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2

Gene PMS1, Length 3,012 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-201ENST00000342075 ZFP30Q9Y2G7 519 aa10.24□□□□□ -0.77
PMS1-201ENST00000342075 RNASE4P34096 147 aaKnown RBP10.24□□□□□ -0.77
PMS1-201ENST00000342075 TCL1AP56279 114 aa10.24□□□□□ -0.77
PMS1-201ENST00000342075 SAMD13Q5VXD3 122 aa10.24□□□□□ -0.77
PMS1-201ENST00000342075 ARL6IP6Q8N6S5 226 aa10.24□□□□□ -0.77
PMS1-201ENST00000342075 FAM19A4Q96LR4 140 aa10.24□□□□□ -0.77
PMS1-201ENST00000342075 SH2D1AO60880 128 aa10.23□□□□□ -0.77
PMS1-201ENST00000342075 HLA-DRB4P13762 266 aa10.23□□□□□ -0.77
PMS1-201ENST00000342075 PRR31Q5SQ13 230 aa10.23□□□□□ -0.77
PMS1-201ENST00000342075 V9GYV3 84 aa10.23□□□□□ -0.77
PMS1-201ENST00000342075 HLA-DRB4X5D2U9 266 aa10.23□□□□□ -0.77
PMS1-201ENST00000342075 TRBV6-1A0A0K0K1D8 114 aa10.23□□□□□ -0.77
PMS1-201ENST00000342075 S100A9P06702 114 aaKnown RBP10.23□□□□□ -0.77
PMS1-201ENST00000342075 RPL35AP18077 110 aaKnown RBP10.23□□□□□ -0.77
PMS1-201ENST00000342075 LINC00477Q96M19 166 aa10.23□□□□□ -0.77
PMS1-201ENST00000342075 LY96Q9Y6Y9 160 aa10.23□□□□□ -0.77
PMS1-201ENST00000342075 C19orf71A6NCJ1 209 aa10.23□□□□□ -0.77
PMS1-201ENST00000342075 RHEBQ15382 184 aa10.23□□□□□ -0.77
PMS1-201ENST00000342075 OR10G8Q8NGN5 311 aa10.23□□□□□ -0.77
PMS1-201ENST00000342075 PRB2P02812 416 aaPredicted RBP10.22□□□□□ -0.77
PMS1-201ENST00000342075 RBMY1A1P0DJD3 496 aaKnown RBP10.22□□□□□ -0.77
PMS1-201ENST00000342075 RBMY1CP0DJD4 496 aa10.22□□□□□ -0.77
PMS1-201ENST00000342075 INSL3P51460 131 aa10.22□□□□□ -0.77
PMS1-201ENST00000342075 FAM3BP58499 235 aaPredicted RBP10.22□□□□□ -0.77
PMS1-201ENST00000342075 RBMY1FQ15415 496 aaKnown RBP10.22□□□□□ -0.77
PMS1-201ENST00000342075 MUC21Q5SSG8 566 aa10.22□□□□□ -0.77
PMS1-201ENST00000342075 NDFIP1Q9BT67 221 aa10.22□□□□□ -0.77
PMS1-201ENST00000342075 TRAV12-3A0A0B4J271 114 aa10.22□□□□□ -0.77
PMS1-201ENST00000342075 ZNF705GA8MUZ8 300 aaPredicted RBP10.22□□□□□ -0.77
PMS1-201ENST00000342075 SPRY2O43597 315 aa10.22□□□□□ -0.77
PMS1-201ENST00000342075 GPX1P07203 203 aa10.22□□□□□ -0.77
PMS1-201ENST00000342075 SMUG1Q53HV7 270 aa10.22□□□□□ -0.77
PMS1-201ENST00000342075 SAPCD1Q5SSQ6 148 aa10.22□□□□□ -0.77
PMS1-201ENST00000342075 ZNF575Q86XF7 245 aa10.22□□□□□ -0.77
PMS1-201ENST00000342075 OR2K2Q8NGT1 345 aa10.22□□□□□ -0.77
PMS1-201ENST00000342075 PPP1R14DQ9NXH3 145 aa10.22□□□□□ -0.77
PMS1-201ENST00000342075 NAGKQ9UJ70 344 aa10.22□□□□□ -0.77
PMS1-201ENST00000342075 GFI1BQ5VTD9 330 aa10.21□□□□□ -0.77
PMS1-201ENST00000342075 H7BYZ3 331 aa10.21□□□□□ -0.78
PMS1-201ENST00000342075 SPINK4O60575 86 aa10.21□□□□□ -0.78
PMS1-201ENST00000342075 SSTP61278 116 aa10.21□□□□□ -0.78
PMS1-201ENST00000342075 MUC21A0A0G2JKD1 596 aa10.2□□□□□ -0.78
PMS1-201ENST00000342075 MUC21A0A140T8X8 626 aa10.2□□□□□ -0.78
PMS1-201ENST00000342075 MT-ND4LP03901 98 aa10.2□□□□□ -0.78
PMS1-201ENST00000342075 FRMD6-AS1P0C7T7 363 aa10.2□□□□□ -0.78
PMS1-201ENST00000342075 FAM162BQ5T6X4 162 aa10.2□□□□□ -0.78
PMS1-201ENST00000342075 STHQ8IWL8 128 aa10.2□□□□□ -0.78
PMS1-201ENST00000342075 GRIFINA4D1Z8 144 aa10.2□□□□□ -0.78
PMS1-201ENST00000342075 CRXO43186 299 aaPredicted RBP10.2□□□□□ -0.78
PMS1-201ENST00000342075 MCRIP2Q9BUT9 160 aaKnown RBP10.2□□□□□ -0.78
PMS1-201ENST00000342075 XCL2Q9UBD3 114 aa10.2□□□□□ -0.78
PMS1-201ENST00000342075 P01737 135 aa10.2□□□□□ -0.78
PMS1-201ENST00000342075 GTSCR1Q86UQ5 136 aa10.2□□□□□ -0.78
PMS1-201ENST00000342075 Q8N1Y9 231 aa10.2□□□□□ -0.78
PMS1-201ENST00000342075 KLLNB2CW77 178 aa10.19□□□□□ -0.78
PMS1-201ENST00000342075 OR2D3Q8NGH3 330 aa10.19□□□□□ -0.78
PMS1-201ENST00000342075 IGKV3D-20A0A0C4DH25 116 aa10.19□□□□□ -0.78
PMS1-201ENST00000342075 B4DEV8 164 aa10.19□□□□□ -0.78
PMS1-201ENST00000342075 ORM1P02763 201 aa10.19□□□□□ -0.78
PMS1-201ENST00000342075 PFN1P07737 140 aaKnown RBP10.19□□□□□ -0.78
PMS1-201ENST00000342075 TRPT1Q86TN4 253 aaKnown RBP10.19□□□□□ -0.78
PMS1-201ENST00000342075 DAZAP1Q96EP5 407 aaKnown RBP10.19□□□□□ -0.78
PMS1-201ENST00000342075 SMIM12Q96EX1 92 aa10.19□□□□□ -0.78
PMS1-201ENST00000342075 TGIF2-C20orf24A0A0A6YYL0 155 aa10.18□□□□□ -0.78
PMS1-201ENST00000342075 GATCO43716 136 aaKnown RBP10.18□□□□□ -0.78
PMS1-201ENST00000342075 HTN1P15515 57 aa10.18□□□□□ -0.78
PMS1-201ENST00000342075 CRISP2P16562 243 aa10.18□□□□□ -0.78
PMS1-201ENST00000342075 CDKN1BP46527 198 aa10.18□□□□□ -0.78
PMS1-201ENST00000342075 GTSF1Q8WW33 167 aa10.18□□□□□ -0.78
PMS1-201ENST00000342075 RPP21Q9H633 154 aaKnown RBP10.18□□□□□ -0.78
PMS1-201ENST00000342075 OSTCQ9NRP0 149 aa10.18□□□□□ -0.78
PMS1-201ENST00000342075 WIPF1O43516 503 aa10.18□□□□□ -0.78
PMS1-201ENST00000342075 COX8CQ7Z4L0 72 aa10.18□□□□□ -0.78
PMS1-201ENST00000342075 C15orf54Q8N8G6 183 aa10.18□□□□□ -0.78
PMS1-201ENST00000342075 TPPP3Q9BW30 176 aa10.18□□□□□ -0.78
PMS1-201ENST00000342075 TP53TG3Q9ULZ0 132 aa10.18□□□□□ -0.78
PMS1-201ENST00000342075 A0A087WWC5 75 aa10.17□□□□□ -0.78
PMS1-201ENST00000342075 DUSP14O95147 198 aaKnown RBP10.17□□□□□ -0.78
PMS1-201ENST00000342075 CXCL1P09341 107 aa10.17□□□□□ -0.78
PMS1-201ENST00000342075 GIG44P09565 113 aaPredicted RBP10.17□□□□□ -0.78
PMS1-201ENST00000342075 SRD5A3Q9H8P0 318 aa10.17□□□□□ -0.78
PMS1-201ENST00000342075 FAM231DQ6ZW35 169 aa10.17□□□□□ -0.78
PMS1-201ENST00000342075 A0A1W2PPQ1 181 aa10.17□□□□□ -0.78
PMS1-201ENST00000342075 FABP5P3A8MUU1 101 aa10.17□□□□□ -0.78
PMS1-201ENST00000342075 NEU1Q99519 415 aa10.17□□□□□ -0.78
PMS1-201ENST00000342075 FBLL1A6NHQ2 334 aaKnown RBP10.16□□□□□ -0.78
PMS1-201ENST00000342075 ELOBQ15370 118 aa10.16□□□□□ -0.78
PMS1-201ENST00000342075 ANAPC16Q96DE5 110 aa10.16□□□□□ -0.78
PMS1-201ENST00000342075 TENM3Q9P273 2699 aa10.16□□□□□ -0.78
PMS1-201ENST00000342075 IGHV3OR16-12A0A075B7B8 117 aa10.16□□□□□ -0.78
PMS1-201ENST00000342075 C7orf71A4D174 169 aa10.16□□□□□ -0.78
PMS1-201ENST00000342075 A8MTW9 85 aa10.16□□□□□ -0.78
PMS1-201ENST00000342075 GNRH2O43555 120 aa10.16□□□□□ -0.78
PMS1-201ENST00000342075 ZNF324O75467 553 aaPredicted RBP10.16□□□□□ -0.78
PMS1-201ENST00000342075 ANXA2RQ3ZCQ2 193 aa10.16□□□□□ -0.78
PMS1-201ENST00000342075 TIMM8BQ9Y5J9 83 aaPredicted RBP10.16□□□□□ -0.78
PMS1-201ENST00000342075 LENEPQ9Y5L5 61 aa10.16□□□□□ -0.78
PMS1-201ENST00000342075 YPEL4Q96NS1 127 aa10.15□□□□□ -0.78
PMS1-201ENST00000342075 SMCO4Q9NRQ5 59 aa10.15□□□□□ -0.78
PMS1-201ENST00000342075 TMEM189A5PLL7 270 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms