RNA–Protein interactions for RNA: ENST00000340552.4

LIMK2-203, Transcript of LIM domain kinase 2, humanhuman

TSL 1 (best) BASIC

Gene LIMK2, Length 2,789 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-203ENST00000340552 MRPL35Q9NZE8 188 aaKnown RBP12□□□□□ -0.49
LIMK2-203ENST00000340552 HOXA3O43365 443 aaPredicted RBP12□□□□□ -0.49
LIMK2-203ENST00000340552 CCL17Q92583 94 aa12□□□□□ -0.49
LIMK2-203ENST00000340552 KIR2DL4Q99706 377 aa12□□□□□ -0.49
LIMK2-203ENST00000340552 MRPL20Q9BYC9 149 aaKnown RBP12□□□□□ -0.49
LIMK2-203ENST00000340552 ZFP2Q6ZN57 461 aa11.99□□□□□ -0.49
LIMK2-203ENST00000340552 TEN1Q86WV5 123 aa11.99□□□□□ -0.49
LIMK2-203ENST00000340552 CACNA1AO00555 2505 aa11.99□□□□□ -0.49
LIMK2-203ENST00000340552 CCDC179H3BU77 68 aa11.99□□□□□ -0.49
LIMK2-203ENST00000340552 MAP1LC3AQ9H492 121 aa11.99□□□□□ -0.49
LIMK2-203ENST00000340552 LINC01546A6NGU7 62 aa11.98□□□□□ -0.49
LIMK2-203ENST00000340552 TMEM178BH3BS89 294 aa11.98□□□□□ -0.49
LIMK2-203ENST00000340552 IL4P05112 153 aa11.98□□□□□ -0.49
LIMK2-203ENST00000340552 HCP5Q6MZN7 132 aa11.98□□□□□ -0.49
LIMK2-203ENST00000340552 RAB9BQ9NP90 201 aa11.98□□□□□ -0.49
LIMK2-203ENST00000340552 HIGD1AQ9Y241 93 aa11.98□□□□□ -0.49
LIMK2-203ENST00000340552 A0A1W2PPI3 338 aa11.97□□□□□ -0.49
LIMK2-203ENST00000340552 B9A039 149 aa11.97□□□□□ -0.49
LIMK2-203ENST00000340552 ATP5LO75964 103 aa11.97□□□□□ -0.49
LIMK2-203ENST00000340552 ZNF688P0C7X2 276 aa11.97□□□□□ -0.49
LIMK2-203ENST00000340552 LYZP61626 148 aa11.97□□□□□ -0.49
LIMK2-203ENST00000340552 C1orf122Q6ZSJ8 110 aa11.97□□□□□ -0.49
LIMK2-203ENST00000340552 TMEM133Q9H2Q1 129 aa11.97□□□□□ -0.49
LIMK2-203ENST00000340552 HIVEP3Q5T1R4 2406 aa11.97□□□□□ -0.49
LIMK2-203ENST00000340552 SPTBN1Q01082 2364 aaKnown RBP11.97□□□□□ -0.49
LIMK2-203ENST00000340552 LOC107984156A0A0G2JMH3 177 aa11.96□□□□□ -0.49
LIMK2-203ENST00000340552 LINC01549A6NIU2 74 aa11.96□□□□□ -0.49
LIMK2-203ENST00000340552 ARL17AQ8IVW1 177 aa11.96□□□□□ -0.49
LIMK2-203ENST00000340552 OR10X1Q8NGY0 326 aa11.96□□□□□ -0.49
LIMK2-203ENST00000340552 TMEM167AQ8TBQ9 72 aa11.96□□□□□ -0.49
LIMK2-203ENST00000340552 AJUBAQ96IF1 538 aa11.96□□□□□ -0.49
LIMK2-203ENST00000340552 SLC25A39Q9BZJ4 359 aaPredicted RBP11.96□□□□□ -0.49
LIMK2-203ENST00000340552 TRBV20-1A0A075B6N2 111 aa11.96□□□□□ -0.49
LIMK2-203ENST00000340552 SRD5A1P18405 259 aa11.96□□□□□ -0.49
LIMK2-203ENST00000340552 RNF185Q96GF1 192 aa11.96□□□□□ -0.49
LIMK2-203ENST00000340552 TMEM14CQ9P0S9 112 aa11.96□□□□□ -0.49
LIMK2-203ENST00000340552 SH2D1AO60880 128 aa11.96□□□□□ -0.5
LIMK2-203ENST00000340552 RPEQ96AT9 228 aa11.96□□□□□ -0.5
LIMK2-203ENST00000340552 MSRB1Q9NZV6 116 aa11.96□□□□□ -0.5
LIMK2-203ENST00000340552 ITPR1Q14643 2758 aa11.95□□□□□ -0.5
LIMK2-203ENST00000340552 GAGE12JA6NER3 117 aa11.95□□□□□ -0.5
LIMK2-203ENST00000340552 M0R3E3 92 aa11.95□□□□□ -0.5
LIMK2-203ENST00000340552 RHODO00212 210 aa11.95□□□□□ -0.5
LIMK2-203ENST00000340552 GAGE7O76087 117 aa11.95□□□□□ -0.5
LIMK2-203ENST00000340552 GAGE12FP0CL80 117 aa11.95□□□□□ -0.5
LIMK2-203ENST00000340552 GAGE12GP0CL81 117 aa11.95□□□□□ -0.5
LIMK2-203ENST00000340552 GAGE12IP0CL82 117 aa11.95□□□□□ -0.5
LIMK2-203ENST00000340552 NDUFV3P56181 108 aaKnown RBP11.95□□□□□ -0.5
LIMK2-203ENST00000340552 GAGE4Q13068 117 aa11.95□□□□□ -0.5
LIMK2-203ENST00000340552 TPSG1Q9NRR2 321 aa11.95□□□□□ -0.5
LIMK2-203ENST00000340552 TNFRSF18Q9Y5U5 241 aa11.95□□□□□ -0.5
LIMK2-203ENST00000340552 TRBV19A0A075B6N1 114 aa11.95□□□□□ -0.5
LIMK2-203ENST00000340552 APELAP0DMC3 54 aa11.95□□□□□ -0.5
LIMK2-203ENST00000340552 SIGLEC15Q6ZMC9 328 aa11.95□□□□□ -0.5
LIMK2-203ENST00000340552 ZNF833PQ6ZTB9 187 aa11.95□□□□□ -0.5
LIMK2-203ENST00000340552 RPUSD1Q9UJJ7 312 aaKnown RBP11.95□□□□□ -0.5
LIMK2-203ENST00000340552 NCBP2LA6PVI3 153 aaKnown RBP11.94□□□□□ -0.5
LIMK2-203ENST00000340552 LINC01619G3V211 115 aa11.94□□□□□ -0.5
LIMK2-203ENST00000340552 NDUFA3O95167 84 aa11.94□□□□□ -0.5
LIMK2-203ENST00000340552 GATA1P15976 413 aaPredicted RBP11.94□□□□□ -0.5
LIMK2-203ENST00000340552 VCX2Q9H322 139 aa11.94□□□□□ -0.5
LIMK2-203ENST00000340552 PKD1L2Q7Z442 2459 aa11.94□□□□□ -0.5
LIMK2-203ENST00000340552 FABP5P3A8MUU1 101 aa11.94□□□□□ -0.5
LIMK2-203ENST00000340552 TNFRSF6BO95407 300 aa11.94□□□□□ -0.5
LIMK2-203ENST00000340552 HIF1ANQ9NWT6 349 aa11.94□□□□□ -0.5
LIMK2-203ENST00000340552 UBE2D3P61077 147 aa11.93□□□□□ -0.5
LIMK2-203ENST00000340552 UBE2D2P62837 147 aa11.93□□□□□ -0.5
LIMK2-203ENST00000340552 ZNF672Q499Z4 452 aaPredicted RBP11.93□□□□□ -0.5
LIMK2-203ENST00000340552 LYPD2Q6UXB3 125 aa11.93□□□□□ -0.5
LIMK2-203ENST00000340552 LINC00574Q9H8X3 128 aa11.93□□□□□ -0.5
LIMK2-203ENST00000340552 NXT2Q9NPJ8 142 aaKnown RBP11.93□□□□□ -0.5
LIMK2-203ENST00000340552 FCN3O75636 299 aa11.93□□□□□ -0.5
LIMK2-203ENST00000340552 ANKRD29Q8N6D5 301 aa11.93□□□□□ -0.5
LIMK2-203ENST00000340552 MYMXA0A1B0GTQ4 84 aa11.92□□□□□ -0.5
LIMK2-203ENST00000340552 FBXL15Q9H469 300 aa11.92□□□□□ -0.5
LIMK2-203ENST00000340552 IGLV2-23P01705 113 aa11.92□□□□□ -0.5
LIMK2-203ENST00000340552 LOXP28300 417 aaPredicted RBP11.92□□□□□ -0.5
LIMK2-203ENST00000340552 A0A087WX48 190 aa11.91□□□□□ -0.5
LIMK2-203ENST00000340552 NDUFB3O43676 98 aa11.91□□□□□ -0.5
LIMK2-203ENST00000340552 TCL1BO95988 128 aa11.91□□□□□ -0.5
LIMK2-203ENST00000340552 LINC01559Q495D7 138 aa11.91□□□□□ -0.5
LIMK2-203ENST00000340552 RAX2Q96IS3 184 aa11.91□□□□□ -0.5
LIMK2-203ENST00000340552 TRAV4A0A0B4J268 109 aa11.91□□□□□ -0.5
LIMK2-203ENST00000340552 CLEC3BP05452 202 aa11.91□□□□□ -0.5
LIMK2-203ENST00000340552 LGALS1P09382 135 aaKnown RBP11.91□□□□□ -0.5
LIMK2-203ENST00000340552 EGR2P11161 476 aaPredicted RBP11.91□□□□□ -0.5
LIMK2-203ENST00000340552 PRTN3P24158 256 aa11.91□□□□□ -0.5
LIMK2-203ENST00000340552 TMEM30BQ3MIR4 351 aa11.91□□□□□ -0.5
LIMK2-203ENST00000340552 SBSPONQ8IVN8 264 aa11.91□□□□□ -0.5
LIMK2-203ENST00000340552 CTSZQ9UBR2 303 aa11.91□□□□□ -0.5
LIMK2-203ENST00000340552 TMEM262E9PQX1 116 aa11.9□□□□□ -0.5
LIMK2-203ENST00000340552 H3BVH4 76 aa11.9□□□□□ -0.5
LIMK2-203ENST00000340552 CRLF1O75462 422 aa11.9□□□□□ -0.5
LIMK2-203ENST00000340552 CCL3L1P16619 93 aa11.9□□□□□ -0.5
LIMK2-203ENST00000340552 UBE2D1P51668 147 aa11.9□□□□□ -0.5
LIMK2-203ENST00000340552 GAGE2BQ13066 116 aa11.9□□□□□ -0.5
LIMK2-203ENST00000340552 MRGPRG-AS1Q2M3A8 158 aa11.9□□□□□ -0.5
LIMK2-203ENST00000340552 GAGE2EQ4V326 116 aa11.9□□□□□ -0.5
LIMK2-203ENST00000340552 OR4C13Q8NGP0 309 aa11.9□□□□□ -0.5
LIMK2-203ENST00000340552 GAGE2DQ9UEU5 116 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms