RNA–Protein interactions for RNA: ENST00000333213.10

TSEN54-201, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSEN54, Length 1,944 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-201ENST00000333213 NEU1Q99519 415 aa17.53■□□□□ 0.4
TSEN54-201ENST00000333213 KLF12Q9Y4X4 402 aa17.53■□□□□ 0.4
TSEN54-201ENST00000333213 TRAV8-1A0A0A6YYK1 113 aa17.52■□□□□ 0.4
TSEN54-201ENST00000333213 IBA57Q5T440 356 aaKnown RBP17.52■□□□□ 0.4
TSEN54-201ENST00000333213 GOLT1AQ6ZVE7 132 aa17.52■□□□□ 0.4
TSEN54-201ENST00000333213 CITED1Q99966 193 aa17.52■□□□□ 0.4
TSEN54-201ENST00000333213 IGLV2-11P01706 119 aa17.51■□□□□ 0.39
TSEN54-201ENST00000333213 DCANP1Q8TF63 244 aa17.51■□□□□ 0.39
TSEN54-201ENST00000333213 C20orf173Q96LM9 149 aa17.51■□□□□ 0.39
TSEN54-201ENST00000333213 NAT8BQ9UHF3 227 aa17.51■□□□□ 0.39
TSEN54-201ENST00000333213 IZUMO1RA6ND01 250 aa17.51■□□□□ 0.39
TSEN54-201ENST00000333213 LCN12Q6JVE5 192 aa17.51■□□□□ 0.39
TSEN54-201ENST00000333213 C16orf92Q96LL3 132 aa17.51■□□□□ 0.39
TSEN54-201ENST00000333213 MIEN1Q9BRT3 115 aa17.51■□□□□ 0.39
TSEN54-201ENST00000333213 SAMD10Q9BYL1 202 aa17.51■□□□□ 0.39
TSEN54-201ENST00000333213 VWFP04275 2813 aa17.51■□□□□ 0.39
TSEN54-201ENST00000333213 PRAC2D3DTV9 90 aa17.5■□□□□ 0.39
TSEN54-201ENST00000333213 TCAPO15273 167 aa17.5■□□□□ 0.39
TSEN54-201ENST00000333213 GPX1P07203 203 aa17.5■□□□□ 0.39
TSEN54-201ENST00000333213 BMI1P35226 326 aa17.5■□□□□ 0.39
TSEN54-201ENST00000333213 OVOL1O14753 267 aa17.49■□□□□ 0.39
TSEN54-201ENST00000333213 RNASE7Q9H1E1 156 aaKnown RBP17.49■□□□□ 0.39
TSEN54-201ENST00000333213 MS4A6AQ9H2W1 248 aa17.49■□□□□ 0.39
TSEN54-201ENST00000333213 SMIM12Q96EX1 92 aa17.49■□□□□ 0.39
TSEN54-201ENST00000333213 KCNS1Q96KK3 526 aa17.49■□□□□ 0.39
TSEN54-201ENST00000333213 TRRAPQ9Y4A5 3859 aa17.48■□□□□ 0.39
TSEN54-201ENST00000333213 IGKV2-40A0A087WW87 121 aaPredicted RBP17.48■□□□□ 0.39
TSEN54-201ENST00000333213 IGKV2D-40P01614 121 aaPredicted RBP17.48■□□□□ 0.39
TSEN54-201ENST00000333213 M0QZ24 198 aa17.47■□□□□ 0.39
TSEN54-201ENST00000333213 WFDC3Q8IUB2 231 aa17.47■□□□□ 0.39
TSEN54-201ENST00000333213 NHLRC2Q8NBF2 726 aa17.47■□□□□ 0.39
TSEN54-201ENST00000333213 OR4B1Q8NGF8 309 aa17.47■□□□□ 0.39
TSEN54-201ENST00000333213 ASCL2Q99929 193 aa17.47■□□□□ 0.39
TSEN54-201ENST00000333213 VAMP8Q9BV40 100 aa17.47■□□□□ 0.39
TSEN54-201ENST00000333213 ARL6IP6Q8N6S5 226 aa17.47■□□□□ 0.39
TSEN54-201ENST00000333213 CSN1S1P47710 185 aa17.46■□□□□ 0.39
TSEN54-201ENST00000333213 TFPI2P48307 235 aa17.46■□□□□ 0.39
TSEN54-201ENST00000333213 PSG3Q16557 428 aa17.46■□□□□ 0.39
TSEN54-201ENST00000333213 FRMD6-AS1P0C7T7 363 aa17.45■□□□□ 0.38
TSEN54-201ENST00000333213 DEFB1P60022 68 aa17.45■□□□□ 0.38
TSEN54-201ENST00000333213 UBE2G1P62253 170 aa17.45■□□□□ 0.38
TSEN54-201ENST00000333213 DEFB114Q30KQ6 69 aa17.45■□□□□ 0.38
TSEN54-201ENST00000333213 TMEM61Q8N0U2 210 aa17.45■□□□□ 0.38
TSEN54-201ENST00000333213 FMC1Q96HJ9 113 aa17.45■□□□□ 0.38
TSEN54-201ENST00000333213 TMEM75Q8N9X5 138 aa17.45■□□□□ 0.38
TSEN54-201ENST00000333213 VGLL1Q99990 258 aa17.45■□□□□ 0.38
TSEN54-201ENST00000333213 F2Z2F3 143 aa17.44■□□□□ 0.38
TSEN54-201ENST00000333213 LTAP01374 205 aa17.44■□□□□ 0.38
TSEN54-201ENST00000333213 MGST1P10620 155 aaKnown RBP17.44■□□□□ 0.38
TSEN54-201ENST00000333213 MRPL53Q96EL3 112 aaKnown RBP17.44■□□□□ 0.38
TSEN54-201ENST00000333213 K7EQG2 157 aa17.43■□□□□ 0.38
TSEN54-201ENST00000333213 Q86TA4 180 aa17.43■□□□□ 0.38
TSEN54-201ENST00000333213 MLST8Q9BVC4 326 aa17.43■□□□□ 0.38
TSEN54-201ENST00000333213 SIGLEC8Q9NYZ4 499 aa17.43■□□□□ 0.38
TSEN54-201ENST00000333213 APCSP02743 223 aa17.43■□□□□ 0.38
TSEN54-201ENST00000333213 CD300EQ496F6 205 aaPredicted RBP17.43■□□□□ 0.38
TSEN54-201ENST00000333213 PRNTQ86SH4 94 aa17.43■□□□□ 0.38
TSEN54-201ENST00000333213 SPATA3Q8NHX4 192 aa17.43■□□□□ 0.38
TSEN54-201ENST00000333213 PSG8Q9UQ74 426 aa17.43■□□□□ 0.38
TSEN54-201ENST00000333213 ZNF324O75467 553 aaPredicted RBP17.42■□□□□ 0.38
TSEN54-201ENST00000333213 ERCC8Q13216 396 aa17.42■□□□□ 0.38
TSEN54-201ENST00000333213 ZNF705AQ6ZN79 300 aaPredicted RBP17.42■□□□□ 0.38
TSEN54-201ENST00000333213 LINC00482Q8N8I6 264 aa17.42■□□□□ 0.38
TSEN54-201ENST00000333213 Q8N976 141 aa17.42■□□□□ 0.38
TSEN54-201ENST00000333213 DYNLRB2Q8TF09 96 aa17.42■□□□□ 0.38
TSEN54-201ENST00000333213 CLEC5AQ9NY25 188 aa17.42■□□□□ 0.38
TSEN54-201ENST00000333213 TRBV6-1A0A0K0K1D8 114 aa17.41■□□□□ 0.38
TSEN54-201ENST00000333213 AMTP48728 403 aa17.41■□□□□ 0.38
TSEN54-201ENST00000333213 ATP5L2Q7Z4Y8 100 aa17.41■□□□□ 0.38
TSEN54-201ENST00000333213 SERTM2A0A1B0GWG4 89 aa17.41■□□□□ 0.38
TSEN54-201ENST00000333213 K7EQM0 130 aa17.41■□□□□ 0.38
TSEN54-201ENST00000333213 SRIP30626 198 aa17.41■□□□□ 0.38
TSEN54-201ENST00000333213 ZNF738Q8NE65 137 aa17.41■□□□□ 0.38
TSEN54-201ENST00000333213 PF4P02776 101 aa17.4■□□□□ 0.38
TSEN54-201ENST00000333213 Q8TAT8 98 aa17.4■□□□□ 0.38
TSEN54-201ENST00000333213 F6UB75 175 aa17.39■□□□□ 0.37
TSEN54-201ENST00000333213 ZNF688P0C7X2 276 aa17.39■□□□□ 0.37
TSEN54-201ENST00000333213 CD33P20138 364 aa17.39■□□□□ 0.37
TSEN54-201ENST00000333213 TCL1AP56279 114 aa17.39■□□□□ 0.37
TSEN54-201ENST00000333213 MRPL54Q6P161 138 aaKnown RBP17.39■□□□□ 0.37
TSEN54-201ENST00000333213 CTRLP40313 264 aa17.39■□□□□ 0.37
TSEN54-201ENST00000333213 ZNF124Q15973 351 aa17.39■□□□□ 0.37
TSEN54-201ENST00000333213 RBPMS2Q6ZRY4 209 aaKnown RBP17.39■□□□□ 0.37
TSEN54-201ENST00000333213 AGPAT4-IT1Q9H0P7 198 aa17.39■□□□□ 0.37
TSEN54-201ENST00000333213 RBAKDNA6NC62 111 aa17.38■□□□□ 0.37
TSEN54-201ENST00000333213 TDRG1Q3Y452 100 aa17.38■□□□□ 0.37
TSEN54-201ENST00000333213 LINC00322Q6ZN03 302 aaPredicted RBP17.38■□□□□ 0.37
TSEN54-201ENST00000333213 TSKUQ8WUA8 353 aa17.38■□□□□ 0.37
TSEN54-201ENST00000333213 PAM16Q9Y3D7 125 aa17.38■□□□□ 0.37
TSEN54-201ENST00000333213 SPINK4O60575 86 aa17.37■□□□□ 0.37
TSEN54-201ENST00000333213 SAP30O75446 220 aa17.37■□□□□ 0.37
TSEN54-201ENST00000333213 KRTDAPP60985 99 aa17.37■□□□□ 0.37
TSEN54-201ENST00000333213 SAMD13Q5VXD3 122 aa17.37■□□□□ 0.37
TSEN54-201ENST00000333213 NUDT10Q8NFP7 164 aa17.37■□□□□ 0.37
TSEN54-201ENST00000333213 NUDT11Q96G61 164 aa17.37■□□□□ 0.37
TSEN54-201ENST00000333213 RCHY1Q96PM5 261 aa17.37■□□□□ 0.37
TSEN54-201ENST00000333213 SORL1Q92673 2214 aa17.37■□□□□ 0.37
TSEN54-201ENST00000333213 ID1P41134 155 aa17.37■□□□□ 0.37
TSEN54-201ENST00000333213 KIAA1644Q3SXP7 199 aa17.37■□□□□ 0.37
TSEN54-201ENST00000333213 CT83Q5H943 113 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms