RNA–Protein interactions for RNA: ENST00000330394.2

EPHB3-201, Transcript of EPH receptor B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EPHB3, Length 4,236 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3-201ENST00000330394 CEND1Q8N111 149 aa11.15□□□□□ -0.62
EPHB3-201ENST00000330394 PRADC1Q9BSG0 188 aa11.15□□□□□ -0.62
EPHB3-201ENST00000330394 PDE6HQ13956 83 aa11.14□□□□□ -0.63
EPHB3-201ENST00000330394 THAP8Q8NA92 274 aa11.14□□□□□ -0.63
EPHB3-201ENST00000330394 NPFFR1Q9GZQ6 430 aa11.14□□□□□ -0.63
EPHB3-201ENST00000330394 DPH3P1Q9H4G8 78 aa11.14□□□□□ -0.63
EPHB3-201ENST00000330394 IGLV3-9A0A075B6K5 115 aa11.14□□□□□ -0.63
EPHB3-201ENST00000330394 NPFFO15130 113 aa11.14□□□□□ -0.63
EPHB3-201ENST00000330394 IGLV2-8P01709 118 aa11.14□□□□□ -0.63
EPHB3-201ENST00000330394 CD28P10747 220 aa11.14□□□□□ -0.63
EPHB3-201ENST00000330394 CTRLP40313 264 aa11.14□□□□□ -0.63
EPHB3-201ENST00000330394 SPATA12Q7Z6I5 190 aa11.14□□□□□ -0.63
EPHB3-201ENST00000330394 HLA-DRB4P13762 266 aa11.14□□□□□ -0.63
EPHB3-201ENST00000330394 ZNF876PQ49A33 203 aa11.14□□□□□ -0.63
EPHB3-201ENST00000330394 VMO1Q7Z5L0 202 aa11.14□□□□□ -0.63
EPHB3-201ENST00000330394 RITA1Q96K30 269 aa11.14□□□□□ -0.63
EPHB3-201ENST00000330394 HLA-DRB4X5D2U9 266 aa11.14□□□□□ -0.63
EPHB3-201ENST00000330394 WISP2O76076 250 aa11.13□□□□□ -0.63
EPHB3-201ENST00000330394 LOXL1Q08397 574 aaPredicted RBP11.13□□□□□ -0.63
EPHB3-201ENST00000330394 ZNF491Q8N8L2 437 aa11.13□□□□□ -0.63
EPHB3-201ENST00000330394 A0A0G2JNJ9 132 aa11.13□□□□□ -0.63
EPHB3-201ENST00000330394 Q9UFV3 132 aa11.13□□□□□ -0.63
EPHB3-201ENST00000330394 IGLV1-44P01699 117 aa11.13□□□□□ -0.63
EPHB3-201ENST00000330394 C2orf82Q6UX34 121 aa11.13□□□□□ -0.63
EPHB3-201ENST00000330394 Q8N8P6 123 aa11.13□□□□□ -0.63
EPHB3-201ENST00000330394 ZNF688P0C7X2 276 aa11.12□□□□□ -0.63
EPHB3-201ENST00000330394 SPXQ9BT56 116 aa11.12□□□□□ -0.63
EPHB3-201ENST00000330394 GATA4P43694 442 aa11.12□□□□□ -0.63
EPHB3-201ENST00000330394 FCN3O75636 299 aa11.11□□□□□ -0.63
EPHB3-201ENST00000330394 GP9P14770 177 aa11.11□□□□□ -0.63
EPHB3-201ENST00000330394 MYMXA0A1B0GTQ4 84 aa11.11□□□□□ -0.63
EPHB3-201ENST00000330394 LINC00310P59036 64 aa11.11□□□□□ -0.63
EPHB3-201ENST00000330394 DUX5Q96PT3 197 aa11.11□□□□□ -0.63
EPHB3-201ENST00000330394 TP53TG1Q9Y2A0 90 aa11.11□□□□□ -0.63
EPHB3-201ENST00000330394 CEP295Q9C0D2 2601 aa11.11□□□□□ -0.63
EPHB3-201ENST00000330394 H3BRN7 92 aa11.11□□□□□ -0.63
EPHB3-201ENST00000330394 UBE2L6O14933 153 aa11.11□□□□□ -0.63
EPHB3-201ENST00000330394 PAX1P15863 534 aa11.11□□□□□ -0.63
EPHB3-201ENST00000330394 DUX3Q96PT4 197 aa11.11□□□□□ -0.63
EPHB3-201ENST00000330394 NCOR1P1Q9H4R4 102 aa11.11□□□□□ -0.63
EPHB3-201ENST00000330394 G3V318 75 aa11.11□□□□□ -0.63
EPHB3-201ENST00000330394 M0R2P5 195 aa11.11□□□□□ -0.63
EPHB3-201ENST00000330394 TECTAO75443 2155 aa11.1□□□□□ -0.63
EPHB3-201ENST00000330394 E7EQL1 145 aa11.1□□□□□ -0.63
EPHB3-201ENST00000330394 F8VRH5 84 aa11.1□□□□□ -0.63
EPHB3-201ENST00000330394 IGKV1-17P01599 117 aa11.1□□□□□ -0.63
EPHB3-201ENST00000330394 TMEM131Q92545 1883 aa11.1□□□□□ -0.63
EPHB3-201ENST00000330394 TRAV8-3A0A0A6YYJ7 113 aa11.1□□□□□ -0.63
EPHB3-201ENST00000330394 TEX36Q5VZQ5 186 aa11.1□□□□□ -0.63
EPHB3-201ENST00000330394 TMEM14CQ9P0S9 112 aa11.1□□□□□ -0.63
EPHB3-201ENST00000330394 IGF2RP11717 2491 aa11.1□□□□□ -0.63
EPHB3-201ENST00000330394 CCDC168Q8NDH2 2452 aa11.1□□□□□ -0.63
EPHB3-201ENST00000330394 ZNF625Q96I27 306 aaPredicted RBP11.1□□□□□ -0.63
EPHB3-201ENST00000330394 RNF5Q99942 180 aa11.09□□□□□ -0.63
EPHB3-201ENST00000330394 XIRP2A4UGR9 3374 aa11.09□□□□□ -0.63
EPHB3-201ENST00000330394 SIVA1O15304 175 aa11.09□□□□□ -0.63
EPHB3-201ENST00000330394 PPDPFLQ8WWR9 84 aa11.09□□□□□ -0.63
EPHB3-201ENST00000330394 IGLL5B9A064 214 aa11.09□□□□□ -0.63
EPHB3-201ENST00000330394 TLN2Q9Y4G6 2542 aa11.09□□□□□ -0.63
EPHB3-201ENST00000330394 OTOGLQ3ZCN5 2332 aa11.08□□□□□ -0.63
EPHB3-201ENST00000330394 TRBV7-9A0A0J9YWB2 115 aa11.08□□□□□ -0.64
EPHB3-201ENST00000330394 VCYO14598 125 aa11.08□□□□□ -0.64
EPHB3-201ENST00000330394 DAZAP2Q15038 168 aaPredicted RBP11.08□□□□□ -0.64
EPHB3-201ENST00000330394 MSMPQ1L6U9 139 aa11.08□□□□□ -0.64
EPHB3-201ENST00000330394 CDH23Q9H251 3354 aa11.08□□□□□ -0.64
EPHB3-201ENST00000330394 BRD3OSQ6XYD6 125 aa11.08□□□□□ -0.64
EPHB3-201ENST00000330394 C1orf229Q6ZS94 237 aaPredicted RBP11.08□□□□□ -0.64
EPHB3-201ENST00000330394 K7EM74 188 aa11.08□□□□□ -0.64
EPHB3-201ENST00000330394 DYNAPQ8N1N2 210 aa11.08□□□□□ -0.64
EPHB3-201ENST00000330394 CTSZQ9UBR2 303 aa11.08□□□□□ -0.64
EPHB3-201ENST00000330394 TRBV20-1A0A075B6N2 111 aa11.08□□□□□ -0.64
EPHB3-201ENST00000330394 OVOL1O14753 267 aa11.08□□□□□ -0.64
EPHB3-201ENST00000330394 ATP5J2P56134 94 aa11.08□□□□□ -0.64
EPHB3-201ENST00000330394 NUP37Q8NFH4 326 aa11.08□□□□□ -0.64
EPHB3-201ENST00000330394 SMIM2Q9BVW6 85 aa11.08□□□□□ -0.64
EPHB3-201ENST00000330394 TCF15Q12870 199 aa11.07□□□□□ -0.64
EPHB3-201ENST00000330394 ITLN2Q8WWU7 325 aaPredicted RBP11.07□□□□□ -0.64
EPHB3-201ENST00000330394 TRAV41A0A0B4J266 112 aa11.07□□□□□ -0.64
EPHB3-201ENST00000330394 B5MCH6 92 aa11.07□□□□□ -0.64
EPHB3-201ENST00000330394 RRN3P1Q2M238 152 aa11.07□□□□□ -0.64
EPHB3-201ENST00000330394 KLF12Q9Y4X4 402 aa11.07□□□□□ -0.64
EPHB3-201ENST00000330394 ARHGAP32A7KAX9 2087 aa11.07□□□□□ -0.64
EPHB3-201ENST00000330394 BOD1L2Q8IYS8 172 aa11.07□□□□□ -0.64
EPHB3-201ENST00000330394 FGF6P10767 208 aa11.06□□□□□ -0.64
EPHB3-201ENST00000330394 C9orf139Q6ZV77 190 aa11.06□□□□□ -0.64
EPHB3-201ENST00000330394 KLHL30-AS1Q8NEE0 82 aa11.06□□□□□ -0.64
EPHB3-201ENST00000330394 LINC00477Q96M19 166 aa11.06□□□□□ -0.64
EPHB3-201ENST00000330394 C7orf69Q9H7B7 122 aa11.06□□□□□ -0.64
EPHB3-201ENST00000330394 G3V4G9 280 aa11.06□□□□□ -0.64
EPHB3-201ENST00000330394 ADARB2-AS1A8MUL3 147 aa11.06□□□□□ -0.64
EPHB3-201ENST00000330394 ABCA2Q9BZC7 2435 aa11.05□□□□□ -0.64
EPHB3-201ENST00000330394 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.05□□□□□ -0.64
EPHB3-201ENST00000330394 ATP6V0E1O15342 81 aa11.05□□□□□ -0.64
EPHB3-201ENST00000330394 FOXE3Q13461 319 aa11.05□□□□□ -0.64
EPHB3-201ENST00000330394 FOXI2Q6ZQN5 318 aa11.05□□□□□ -0.64
EPHB3-201ENST00000330394 LINC01587Q99440 93 aa11.05□□□□□ -0.64
EPHB3-201ENST00000330394 A0A1B0GXF2 115 aa11.05□□□□□ -0.64
EPHB3-201ENST00000330394 THBDP07204 575 aa11.05□□□□□ -0.64
EPHB3-201ENST00000330394 PRSS29PA6NIE9 313 aa11.05□□□□□ -0.64
EPHB3-201ENST00000330394 ATXN8Q156A1 80 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms