RNA–Protein interactions for RNA: ENST00000326828.5

CHRNA3-201, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA3, Length 3,202 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-201ENST00000326828 HIF1ANQ9NWT6 349 aa11.1□□□□□ -0.63
CHRNA3-201ENST00000326828 LOC107984156A0A0G2JMH3 177 aa11.09□□□□□ -0.63
CHRNA3-201ENST00000326828 TRBV6-1A0A0K0K1D8 114 aa11.09□□□□□ -0.63
CHRNA3-201ENST00000326828 VSTM5A8MXK1 200 aa11.09□□□□□ -0.63
CHRNA3-201ENST00000326828 GAGE13Q4V321 117 aa11.09□□□□□ -0.63
CHRNA3-201ENST00000326828 FOXI2Q6ZQN5 318 aa11.09□□□□□ -0.63
CHRNA3-201ENST00000326828 ARL17AQ8IVW1 177 aa11.09□□□□□ -0.63
CHRNA3-201ENST00000326828 TTC9CQ8N5M4 171 aa11.09□□□□□ -0.63
CHRNA3-201ENST00000326828 ZNF418Q8TF45 676 aaPredicted RBP11.09□□□□□ -0.63
CHRNA3-201ENST00000326828 PHLDA1Q8WV24 401 aaPredicted RBP11.09□□□□□ -0.63
CHRNA3-201ENST00000326828 J3QR89 54 aa11.09□□□□□ -0.63
CHRNA3-201ENST00000326828 CCDC144NLQ6NUI1 221 aa11.09□□□□□ -0.63
CHRNA3-201ENST00000326828 NXT2Q9NPJ8 142 aaKnown RBP11.09□□□□□ -0.63
CHRNA3-201ENST00000326828 SMAD5-AS1Q9Y6J3 95 aa11.09□□□□□ -0.63
CHRNA3-201ENST00000326828 EMP1P54849 157 aa11.09□□□□□ -0.63
CHRNA3-201ENST00000326828 SPANXN1Q5VSR9 72 aa11.09□□□□□ -0.63
CHRNA3-201ENST00000326828 FANCD2OSQ96PS1 177 aa11.09□□□□□ -0.63
CHRNA3-201ENST00000326828 C20orf78Q9BR46 151 aa11.09□□□□□ -0.63
CHRNA3-201ENST00000326828 IGLC6P0CF74 106 aa11.08□□□□□ -0.64
CHRNA3-201ENST00000326828 TNFRSF13BO14836 293 aaPredicted RBP11.08□□□□□ -0.64
CHRNA3-201ENST00000326828 CEACAM4O75871 244 aa11.08□□□□□ -0.64
CHRNA3-201ENST00000326828 C8orf31Q8N9H6 132 aa11.08□□□□□ -0.64
CHRNA3-201ENST00000326828 CHTOPQ9Y3Y2 248 aaKnown RBP11.08□□□□□ -0.64
CHRNA3-201ENST00000326828 RAB9AP51151 201 aa11.07□□□□□ -0.64
CHRNA3-201ENST00000326828 ECSCRQ19T08 205 aa11.07□□□□□ -0.64
CHRNA3-201ENST00000326828 ZNF575Q86XF7 245 aa11.07□□□□□ -0.64
CHRNA3-201ENST00000326828 C11orf21Q9P2W6 132 aa11.07□□□□□ -0.64
CHRNA3-201ENST00000326828 MUC6Q6W4X9 2439 aa11.07□□□□□ -0.64
CHRNA3-201ENST00000326828 E9PLD3 99 aa11.07□□□□□ -0.64
CHRNA3-201ENST00000326828 M0R381 172 aa11.07□□□□□ -0.64
CHRNA3-201ENST00000326828 IGHG4P01861 327 aa11.07□□□□□ -0.64
CHRNA3-201ENST00000326828 PDE6HQ13956 83 aa11.07□□□□□ -0.64
CHRNA3-201ENST00000326828 LINC01560Q8TB33 94 aa11.07□□□□□ -0.64
CHRNA3-201ENST00000326828 FAM57AQ8TBR7 257 aa11.07□□□□□ -0.64
CHRNA3-201ENST00000326828 ZNF292O60281 2723 aa11.06□□□□□ -0.64
CHRNA3-201ENST00000326828 SCGB1D4Q6XE38 83 aa11.06□□□□□ -0.64
CHRNA3-201ENST00000326828 PTH2Q96A98 100 aa11.06□□□□□ -0.64
CHRNA3-201ENST00000326828 VKORC1Q9BQB6 163 aa11.06□□□□□ -0.64
CHRNA3-201ENST00000326828 MRPL16Q9NX20 251 aaKnown RBP11.06□□□□□ -0.64
CHRNA3-201ENST00000326828 H3BVH4 76 aa11.06□□□□□ -0.64
CHRNA3-201ENST00000326828 APOMO95445 188 aa11.06□□□□□ -0.64
CHRNA3-201ENST00000326828 CEACAM3P40198 252 aa11.06□□□□□ -0.64
CHRNA3-201ENST00000326828 CKS1BP61024 79 aa11.06□□□□□ -0.64
CHRNA3-201ENST00000326828 RAB1BQ9H0U4 201 aa11.06□□□□□ -0.64
CHRNA3-201ENST00000326828 PGPEP1Q9NXJ5 209 aa11.06□□□□□ -0.64
CHRNA3-201ENST00000326828 BSNQ9UPA5 3926 aa11.06□□□□□ -0.64
CHRNA3-201ENST00000326828 IGKV3D-20A0A0C4DH25 116 aa11.05□□□□□ -0.64
CHRNA3-201ENST00000326828 F8W735 103 aaPredicted RBP11.05□□□□□ -0.64
CHRNA3-201ENST00000326828 LAGE3Q14657 143 aa11.05□□□□□ -0.64
CHRNA3-201ENST00000326828 IGF2RP11717 2491 aa11.05□□□□□ -0.64
CHRNA3-201ENST00000326828 IGKV3-7A0A075B6H7 116 aa11.05□□□□□ -0.64
CHRNA3-201ENST00000326828 A0A1B0GV72 72 aa11.05□□□□□ -0.64
CHRNA3-201ENST00000326828 F8W1H4 67 aa11.05□□□□□ -0.64
CHRNA3-201ENST00000326828 ATP5LO75964 103 aa11.05□□□□□ -0.64
CHRNA3-201ENST00000326828 DEFB1P60022 68 aa11.05□□□□□ -0.64
CHRNA3-201ENST00000326828 TNFRSF14Q92956 283 aa11.05□□□□□ -0.64
CHRNA3-201ENST00000326828 ATP6V0BQ99437 205 aa11.05□□□□□ -0.64
CHRNA3-201ENST00000326828 OR11H12B2RN74 326 aa11.05□□□□□ -0.64
CHRNA3-201ENST00000326828 NDUFS8O00217 210 aa11.05□□□□□ -0.64
CHRNA3-201ENST00000326828 PSMB2P49721 201 aa11.05□□□□□ -0.64
CHRNA3-201ENST00000326828 C3orf36Q3SXR2 165 aa11.05□□□□□ -0.64
CHRNA3-201ENST00000326828 OR11H1Q8NG94 326 aa11.05□□□□□ -0.64
CHRNA3-201ENST00000326828 OR11H2Q8NH07 326 aa11.05□□□□□ -0.64
CHRNA3-201ENST00000326828 ZNF502Q8TBZ5 544 aa11.05□□□□□ -0.64
CHRNA3-201ENST00000326828 GLMPQ8WWB7 406 aa11.05□□□□□ -0.64
CHRNA3-201ENST00000326828 HIGD1BQ9P298 99 aa11.05□□□□□ -0.64
CHRNA3-201ENST00000326828 DPM3Q9P2X0 92 aa11.05□□□□□ -0.64
CHRNA3-201ENST00000326828 KAAG1Q9UBP8 84 aa11.05□□□□□ -0.64
CHRNA3-201ENST00000326828 CTSGP08311 255 aa11.04□□□□□ -0.64
CHRNA3-201ENST00000326828 SRSF9Q13242 221 aaKnown RBP eCLIP11.04□□□□□ -0.64
CHRNA3-201ENST00000326828 C5orf64Q2M2E5 130 aa11.04□□□□□ -0.64
CHRNA3-201ENST00000326828 Q8N8P6 123 aa11.04□□□□□ -0.64
CHRNA3-201ENST00000326828 TM2D2Q9BX73 214 aa11.04□□□□□ -0.64
CHRNA3-201ENST00000326828 SHISA9B4DS77 424 aa11.04□□□□□ -0.64
CHRNA3-201ENST00000326828 CLEC3BP05452 202 aa11.04□□□□□ -0.64
CHRNA3-201ENST00000326828 PRR30Q53SZ7 412 aaPredicted RBP11.04□□□□□ -0.64
CHRNA3-201ENST00000326828 ZMAT4Q9H898 229 aa11.04□□□□□ -0.64
CHRNA3-201ENST00000326828 IGLV11-55A0A075B6I3 123 aa11.03□□□□□ -0.64
CHRNA3-201ENST00000326828 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.03□□□□□ -0.64
CHRNA3-201ENST00000326828 HLA-DRB4P13762 266 aa11.03□□□□□ -0.64
CHRNA3-201ENST00000326828 Q6ZS92 163 aa11.03□□□□□ -0.64
CHRNA3-201ENST00000326828 SYT8Q8NBV8 401 aa11.03□□□□□ -0.64
CHRNA3-201ENST00000326828 KLHL30-AS1Q8NEE0 82 aa11.03□□□□□ -0.64
CHRNA3-201ENST00000326828 SCGB3A1Q96QR1 104 aa11.03□□□□□ -0.64
CHRNA3-201ENST00000326828 AGPAT4-IT1Q9H0P7 198 aa11.03□□□□□ -0.64
CHRNA3-201ENST00000326828 HLA-DRB4X5D2U9 266 aa11.03□□□□□ -0.64
CHRNA3-201ENST00000326828 CREBBPQ92793 2442 aa11.03□□□□□ -0.64
CHRNA3-201ENST00000326828 MGPP08493 103 aa11.03□□□□□ -0.64
CHRNA3-201ENST00000326828 RRN3P1Q2M238 152 aa11.03□□□□□ -0.64
CHRNA3-201ENST00000326828 ZFHX3Q15911 3703 aa11.02□□□□□ -0.64
CHRNA3-201ENST00000326828 LINC01549A6NIU2 74 aa11.02□□□□□ -0.64
CHRNA3-201ENST00000326828 IGF1P05019 195 aa11.02□□□□□ -0.64
CHRNA3-201ENST00000326828 LINC01548A6NM66 108 aa11.02□□□□□ -0.65
CHRNA3-201ENST00000326828 C15orf32Q32M92 178 aa11.02□□□□□ -0.65
CHRNA3-201ENST00000326828 CLEC19AQ6UXS0 136 aa11.02□□□□□ -0.65
CHRNA3-201ENST00000326828 ZFP2Q6ZN57 461 aa11.02□□□□□ -0.65
CHRNA3-201ENST00000326828 TRAV26-1A0A087WT03 109 aa11.01□□□□□ -0.65
CHRNA3-201ENST00000326828 RAXQ9Y2V3 346 aa11.01□□□□□ -0.65
CHRNA3-201ENST00000326828 A0A087WX48 190 aa11.01□□□□□ -0.65
CHRNA3-201ENST00000326828 HOXA3O43365 443 aaPredicted RBP11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms