RNA–Protein interactions for RNA: ENST00000325404.2

SOX2-201, Transcript of SRY-box 2, humanhuman

APPRIS P1 BASIC

Gene SOX2, Length 2,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-201ENST00000325404 USP9XQ93008 2570 aaPredicted RBP15.29■□□□□ 0.04
SOX2-201ENST00000325404 H3BRM9 83 aa15.29■□□□□ 0.04
SOX2-201ENST00000325404 MYO18BQ8IUG5 2567 aa15.29■□□□□ 0.04
SOX2-201ENST00000325404 FLNCQ14315 2725 aa15.29■□□□□ 0.04
SOX2-201ENST00000325404 METTL26Q96S19 204 aa15.28■□□□□ 0.04
SOX2-201ENST00000325404 AGPAT4-IT1Q9H0P7 198 aa15.28■□□□□ 0.04
SOX2-201ENST00000325404 CENPVL3A0A0U1RRI6 287 aa15.28■□□□□ 0.04
SOX2-201ENST00000325404 FOXE3Q13461 319 aa15.28■□□□□ 0.04
SOX2-201ENST00000325404 C9orf47Q6ZRZ4 202 aa15.28■□□□□ 0.04
SOX2-201ENST00000325404 IL17RELQ6ZVW7 336 aa15.28■□□□□ 0.04
SOX2-201ENST00000325404 SMPXQ9UHP9 88 aa15.28■□□□□ 0.04
SOX2-201ENST00000325404 IGHV4-4A0A075B6R2 117 aa15.27■□□□□ 0.04
SOX2-201ENST00000325404 SAA4P35542 130 aa15.27■□□□□ 0.04
SOX2-201ENST00000325404 ADAMTSL5Q6ZMM2 481 aa15.27■□□□□ 0.04
SOX2-201ENST00000325404 Q8N8P6 123 aa15.27■□□□□ 0.04
SOX2-201ENST00000325404 TRAV8-2A0A0B4J237 113 aa15.27■□□□□ 0.03
SOX2-201ENST00000325404 IGKV3D-20A0A0C4DH25 116 aa15.27■□□□□ 0.03
SOX2-201ENST00000325404 IGHV3-35A0A0C4DH35 117 aa15.27■□□□□ 0.03
SOX2-201ENST00000325404 TMEM78Q5T7P6 136 aa15.27■□□□□ 0.03
SOX2-201ENST00000325404 BPESC1Q9GZL8 116 aa15.27■□□□□ 0.03
SOX2-201ENST00000325404 IGHV3OR16-8A0A075B7F1 116 aa15.26■□□□□ 0.03
SOX2-201ENST00000325404 SNAI2O43623 268 aa15.26■□□□□ 0.03
SOX2-201ENST00000325404 LEPP41159 167 aa15.26■□□□□ 0.03
SOX2-201ENST00000325404 CLEC19AQ6UXS0 136 aa15.26■□□□□ 0.03
SOX2-201ENST00000325404 RNF182Q8N6D2 247 aa15.26■□□□□ 0.03
SOX2-201ENST00000325404 TRAV8-6A0A0B4J262 113 aa15.26■□□□□ 0.03
SOX2-201ENST00000325404 IGHV4-39P01824 125 aa15.26■□□□□ 0.03
SOX2-201ENST00000325404 FXYD7P58549 80 aa15.26■□□□□ 0.03
SOX2-201ENST00000325404 ZNF462Q96JM2 2506 aa15.26■□□□□ 0.03
SOX2-201ENST00000325404 LENEPQ9Y5L5 61 aa15.25■□□□□ 0.03
SOX2-201ENST00000325404 IGLV2-18A0A075B6J9 118 aa15.25■□□□□ 0.03
SOX2-201ENST00000325404 C9orf118A6NHY6 69 aa15.25■□□□□ 0.03
SOX2-201ENST00000325404 CRIP2P52943 208 aaPredicted RBP15.25■□□□□ 0.03
SOX2-201ENST00000325404 LMO4P61968 165 aa15.25■□□□□ 0.03
SOX2-201ENST00000325404 ODF1Q14990 250 aa15.25■□□□□ 0.03
SOX2-201ENST00000325404 SMIM15Q7Z3B0 74 aa15.25■□□□□ 0.03
SOX2-201ENST00000325404 ZNF843Q8N446 348 aa15.25■□□□□ 0.03
SOX2-201ENST00000325404 CCL19Q99731 98 aa15.25■□□□□ 0.03
SOX2-201ENST00000325404 ATP5LO75964 103 aa15.24■□□□□ 0.03
SOX2-201ENST00000325404 C8orf86Q6ZUL3 223 aa15.24■□□□□ 0.03
SOX2-201ENST00000325404 HIGD1BQ9P298 99 aa15.24■□□□□ 0.03
SOX2-201ENST00000325404 DKK2Q9UBU2 259 aa15.24■□□□□ 0.03
SOX2-201ENST00000325404 COL12A1Q99715 3063 aa15.24■□□□□ 0.03
SOX2-201ENST00000325404 EPG5Q9HCE0 2579 aa15.24■□□□□ 0.03
SOX2-201ENST00000325404 NPFFO15130 113 aa15.24■□□□□ 0.03
SOX2-201ENST00000325404 C5orf56Q8N8D9 126 aa15.24■□□□□ 0.03
SOX2-201ENST00000325404 C11orf21Q9P2W6 132 aa15.24■□□□□ 0.03
SOX2-201ENST00000325404 ATP5G2Q06055 141 aa15.23■□□□□ 0.03
SOX2-201ENST00000325404 ERASQ7Z444 233 aa15.23■□□□□ 0.03
SOX2-201ENST00000325404 CST9LQ9H4G1 147 aa15.23■□□□□ 0.03
SOX2-201ENST00000325404 FAM223BA6NKX1 122 aa15.23■□□□□ 0.03
SOX2-201ENST00000325404 HLA-DRB4P13762 266 aa15.23■□□□□ 0.03
SOX2-201ENST00000325404 EVI2AP22794 236 aa15.23■□□□□ 0.03
SOX2-201ENST00000325404 FAM223AQ8IWN6 122 aa15.23■□□□□ 0.03
SOX2-201ENST00000325404 OR2K2Q8NGT1 345 aa15.23■□□□□ 0.03
SOX2-201ENST00000325404 HLA-DRB4X5D2U9 266 aa15.23■□□□□ 0.03
SOX2-201ENST00000325404 IGHV7-4-1A0A0J9YVY3 117 aa15.22■□□□□ 0.03
SOX2-201ENST00000325404 G3V318 75 aa15.22■□□□□ 0.03
SOX2-201ENST00000325404 KIR3DS1Q14943 382 aa15.22■□□□□ 0.03
SOX2-201ENST00000325404 C19orf54Q5BKX5 351 aa15.22■□□□□ 0.03
SOX2-201ENST00000325404 HHLA3Q9XRX5 114 aa15.22■□□□□ 0.03
SOX2-201ENST00000325404 TACC2O95359 2948 aa15.22■□□□□ 0.03
SOX2-201ENST00000325404 MED13LQ71F56 2210 aa15.22■□□□□ 0.03
SOX2-201ENST00000325404 GAS8-AS1O95177 125 aa15.22■□□□□ 0.03
SOX2-201ENST00000325404 GTF2H5Q6ZYL4 71 aa15.21■□□□□ 0.03
SOX2-201ENST00000325404 WNK2Q9Y3S1 2297 aa15.21■□□□□ 0.02
SOX2-201ENST00000325404 UFSP1Q6NVU6 142 aa15.2■□□□□ 0.02
SOX2-201ENST00000325404 C9orf139Q6ZV77 190 aa15.2■□□□□ 0.02
SOX2-201ENST00000325404 PCP2Q8IVA1 136 aa15.2■□□□□ 0.02
SOX2-201ENST00000325404 NRACQ8N912 160 aa15.2■□□□□ 0.02
SOX2-201ENST00000325404 AP1S3Q96PC3 154 aa15.2■□□□□ 0.02
SOX2-201ENST00000325404 LINC01548A6NM66 108 aa15.2■□□□□ 0.02
SOX2-201ENST00000325404 IGKCP01834 107 aa15.2■□□□□ 0.02
SOX2-201ENST00000325404 NMUP48645 174 aa15.2■□□□□ 0.02
SOX2-201ENST00000325404 OCIAD2Q56VL3 154 aa15.2■□□□□ 0.02
SOX2-201ENST00000325404 TMEM158Q8WZ71 300 aa15.2■□□□□ 0.02
SOX2-201ENST00000325404 C18orf15Q96N68 181 aa15.2■□□□□ 0.02
SOX2-201ENST00000325404 IGHV3-66A0A0C4DH42 116 aa15.19■□□□□ 0.02
SOX2-201ENST00000325404 GAGE12BA1L429 117 aa15.19■□□□□ 0.02
SOX2-201ENST00000325404 GAGE10A6NGK3 116 aa15.19■□□□□ 0.02
SOX2-201ENST00000325404 PPIFP30405 207 aaKnown RBP15.19■□□□□ 0.02
SOX2-201ENST00000325404 MOB4Q9Y3A3 225 aa15.19■□□□□ 0.02
SOX2-201ENST00000325404 BRI3O95415 125 aa15.19■□□□□ 0.02
SOX2-201ENST00000325404 PRSS1P07477 247 aa15.19■□□□□ 0.02
SOX2-201ENST00000325404 GLMPQ8WWB7 406 aa15.19■□□□□ 0.02
SOX2-201ENST00000325404 PIMREGQ9BSJ6 248 aa15.19■□□□□ 0.02
SOX2-201ENST00000325404 DPM2O94777 84 aa15.18■□□□□ 0.02
SOX2-201ENST00000325404 LAGE3Q14657 143 aa15.18■□□□□ 0.02
SOX2-201ENST00000325404 MRAP2Q96G30 205 aa15.18■□□□□ 0.02
SOX2-201ENST00000325404 TRAV41A0A0B4J266 112 aa15.18■□□□□ 0.02
SOX2-201ENST00000325404 GATA1P15976 413 aaPredicted RBP15.18■□□□□ 0.02
SOX2-201ENST00000325404 TRGV3P03979 118 aa15.17■□□□□ 0.02
SOX2-201ENST00000325404 SMIM17P0DL12 118 aa15.17■□□□□ 0.02
SOX2-201ENST00000325404 WFDC3Q8IUB2 231 aa15.17■□□□□ 0.02
SOX2-201ENST00000325404 LINC00477Q96M19 166 aa15.17■□□□□ 0.02
SOX2-201ENST00000325404 C16orf92Q96LL3 132 aa15.17■□□□□ 0.02
SOX2-201ENST00000325404 ATP5J2P56134 94 aa15.16■□□□□ 0.02
SOX2-201ENST00000325404 MYOZ3Q8TDC0 251 aa15.16■□□□□ 0.02
SOX2-201ENST00000325404 SRSF1Q07955 248 aaKnown RBP eCLIP15.16■□□□□ 0.02
SOX2-201ENST00000325404 SPG11Q96JI7 2443 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 115.8 ms