RNA–Protein interactions for RNA: ENST00000322723.8

NCL-201, Transcript of nucleolin, humanhuman

APPRIS P1 TSL 2 BASIC

Gene NCL, Length 4,034 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-201ENST00000322723 SPATA12Q7Z6I5 190 aa9.32□□□□□ -0.92
NCL-201ENST00000322723 PIP4P2Q8N4L2 257 aa9.32□□□□□ -0.92
NCL-201ENST00000322723 PIFOQ8TCI5 191 aa9.32□□□□□ -0.92
NCL-201ENST00000322723 SMAD5-AS1Q9Y6J3 95 aa9.32□□□□□ -0.92
NCL-201ENST00000322723 CENPVL3A0A0U1RRI6 287 aa9.32□□□□□ -0.92
NCL-201ENST00000322723 GTSCR1Q86UQ5 136 aa9.32□□□□□ -0.92
NCL-201ENST00000322723 URB1-AS1Q96HZ7 61 aa9.32□□□□□ -0.92
NCL-201ENST00000322723 HAX1O00165 279 aa9.31□□□□□ -0.92
NCL-201ENST00000322723 SRSF2Q01130 221 aaKnown RBP9.31□□□□□ -0.92
NCL-201ENST00000322723 TTTY13Q9BZ97 58 aa9.31□□□□□ -0.92
NCL-201ENST00000322723 TWIST1Q15672 202 aa9.31□□□□□ -0.92
NCL-201ENST00000322723 RBPMS2Q6ZRY4 209 aaKnown RBP9.31□□□□□ -0.92
NCL-201ENST00000322723 BPESC1Q9GZL8 116 aa9.31□□□□□ -0.92
NCL-201ENST00000322723 SVEP1Q4LDE5 3571 aa9.31□□□□□ -0.92
NCL-201ENST00000322723 A0A1B0GUT8 65 aa9.31□□□□□ -0.92
NCL-201ENST00000322723 COX8AP10176 69 aa9.31□□□□□ -0.92
NCL-201ENST00000322723 CRIP1P50238 77 aa9.31□□□□□ -0.92
NCL-201ENST00000322723 KLF17Q5JT82 389 aaPredicted RBP9.31□□□□□ -0.92
NCL-201ENST00000322723 EXOC3-AS1Q8N2X6 119 aa9.31□□□□□ -0.92
NCL-201ENST00000322723 C5orf56Q8N8D9 126 aa9.31□□□□□ -0.92
NCL-201ENST00000322723 OR4X2Q8NGF9 303 aa9.31□□□□□ -0.92
NCL-201ENST00000322723 CHCHD1Q96BP2 118 aaKnown RBP9.31□□□□□ -0.92
NCL-201ENST00000322723 C21orf62Q9NYP8 219 aa9.31□□□□□ -0.92
NCL-201ENST00000322723 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.31□□□□□ -0.921e-10■■■□□ 18.4
NCL-201ENST00000322723 VPS13CQ709C8 3753 aa9.3□□□□□ -0.92
NCL-201ENST00000322723 ORM1P02763 201 aa9.3□□□□□ -0.92
NCL-201ENST00000322723 PCP2Q8IVA1 136 aa9.3□□□□□ -0.92
NCL-201ENST00000322723 SYT8Q8NBV8 401 aa9.3□□□□□ -0.92
NCL-201ENST00000322723 PRELID3AQ96N28 172 aa9.3□□□□□ -0.92
NCL-201ENST00000322723 UBTD1Q9HAC8 227 aa9.3□□□□□ -0.92
NCL-201ENST00000322723 UFC1Q9Y3C8 167 aa9.3□□□□□ -0.92
NCL-201ENST00000322723 U3KQE9 123 aa9.3□□□□□ -0.92
NCL-201ENST00000322723 FAM106CPP0CH98 169 aa9.3□□□□□ -0.92
NCL-201ENST00000322723 TEX29Q8N6K0 151 aa9.3□□□□□ -0.92
NCL-201ENST00000322723 FOXC2Q99958 501 aa9.3□□□□□ -0.92
NCL-201ENST00000322723 CLPSL1A2RUU4 121 aa9.3□□□□□ -0.92
NCL-201ENST00000322723 NPFFO15130 113 aa9.3□□□□□ -0.92
NCL-201ENST00000322723 SAA4P35542 130 aa9.3□□□□□ -0.92
NCL-201ENST00000322723 C1RLQ9NZP8 487 aa9.3□□□□□ -0.92
NCL-201ENST00000322723 IL4P05112 153 aa9.29□□□□□ -0.92
NCL-201ENST00000322723 CYSLTR1Q9Y271 337 aa9.29□□□□□ -0.92
NCL-201ENST00000322723 SMAD7O15105 426 aaKnown RBP9.29□□□□□ -0.92
NCL-201ENST00000322723 CIARTQ8N365 385 aaPredicted RBP9.29□□□□□ -0.92
NCL-201ENST00000322723 MRAP2Q96G30 205 aa9.29□□□□□ -0.92
NCL-201ENST00000322723 C2orf70A6NJV1 201 aa9.29□□□□□ -0.92
NCL-201ENST00000322723 NCR2O95944 276 aa9.29□□□□□ -0.92
NCL-201ENST00000322723 IFI27P40305 119 aaPredicted RBP9.29□□□□□ -0.92
NCL-201ENST00000322723 C10orf105Q8TEF2 133 aa9.29□□□□□ -0.92
NCL-201ENST00000322723 IFI27L1Q96BM0 104 aa9.29□□□□□ -0.92
NCL-201ENST00000322723 SMIM20Q8N5G0 67 aa9.28□□□□□ -0.92
NCL-201ENST00000322723 CCDC140Q96MF4 163 aa9.28□□□□□ -0.92
NCL-201ENST00000322723 ZNF580Q9UK33 172 aa9.28□□□□□ -0.92
NCL-201ENST00000322723 IGF2RP11717 2491 aa9.28□□□□□ -0.92
NCL-201ENST00000322723 A0A1B0GW15 77 aa9.28□□□□□ -0.92
NCL-201ENST00000322723 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.28□□□□□ -0.92
NCL-201ENST00000322723 CITED1Q99966 193 aa9.28□□□□□ -0.92
NCL-201ENST00000322723 ASH1LQ9NR48 2969 aaKnown RBP9.28□□□□□ -0.92
NCL-201ENST00000322723 RPS20P60866 119 aaKnown RBP9.28□□□□□ -0.92
NCL-201ENST00000322723 ZNF493Q6ZR52 646 aa9.28□□□□□ -0.92
NCL-201ENST00000322723 BEX4Q9NWD9 120 aaPredicted RBP9.28□□□□□ -0.92
NCL-201ENST00000322723 HIVEP3Q5T1R4 2406 aa9.28□□□□□ -0.92
NCL-201ENST00000322723 SMKR1H3BMG3 65 aa9.28□□□□□ -0.92
NCL-201ENST00000322723 NDFIP1Q9BT67 221 aa9.28□□□□□ -0.92
NCL-201ENST00000322723 PSG8Q9UQ74 426 aa9.28□□□□□ -0.92
NCL-201ENST00000322723 NCBP2LA6PVI3 153 aaKnown RBP9.27□□□□□ -0.93
NCL-201ENST00000322723 ATRXP46100 2492 aa9.27□□□□□ -0.93
NCL-201ENST00000322723 ATP6V0E1O15342 81 aa9.27□□□□□ -0.93
NCL-201ENST00000322723 OR9G4Q8NGQ1 327 aa9.27□□□□□ -0.93
NCL-201ENST00000322723 JMJD8Q96S16 334 aa9.27□□□□□ -0.93
NCL-201ENST00000322723 VGLL1Q99990 258 aa9.27□□□□□ -0.93
NCL-201ENST00000322723 TRAV8-2A0A0B4J237 113 aa9.26□□□□□ -0.93
NCL-201ENST00000322723 D6R8Y8 96 aa9.26□□□□□ -0.93
NCL-201ENST00000322723 SNCGO76070 127 aa9.26□□□□□ -0.93
NCL-201ENST00000322723 MYOZ3Q8TDC0 251 aa9.26□□□□□ -0.93
NCL-201ENST00000322723 SCRT2Q9NQ03 307 aa9.26□□□□□ -0.93
NCL-201ENST00000322723 RBAKDNA6NC62 111 aa9.26□□□□□ -0.93
NCL-201ENST00000322723 J3KRW8 73 aa9.26□□□□□ -0.93
NCL-201ENST00000322723 HES1Q14469 280 aa9.26□□□□□ -0.93
NCL-201ENST00000322723 U3KQK5 164 aa9.26□□□□□ -0.93
NCL-201ENST00000322723 TRBV20-1A0A075B6N2 111 aa9.26□□□□□ -0.93
NCL-201ENST00000322723 IGHV1-69DA0A0B4J2H0 117 aa9.25□□□□□ -0.93
NCL-201ENST00000322723 CRXO43186 299 aaPredicted RBP9.25□□□□□ -0.93
NCL-201ENST00000322723 IGHV1-69P01742 117 aa9.25□□□□□ -0.93
NCL-201ENST00000322723 IGF1P05019 195 aa9.25□□□□□ -0.93
NCL-201ENST00000322723 EVI2AP22794 236 aa9.25□□□□□ -0.93
NCL-201ENST00000322723 A0A096LNT2 108 aa9.25□□□□□ -0.93
NCL-201ENST00000322723 TMEM189A5PLL7 270 aa9.25□□□□□ -0.93
NCL-201ENST00000322723 EMP1P54849 157 aa9.25□□□□□ -0.93
NCL-201ENST00000322723 Q6AWC8 147 aa9.25□□□□□ -0.93
NCL-201ENST00000322723 CHAC1Q9BUX1 264 aa9.25□□□□□ -0.93
NCL-201ENST00000322723 CACNA1AO00555 2505 aa9.25□□□□□ -0.93
NCL-201ENST00000322723 BUB3O43684 328 aa9.25□□□□□ -0.93
NCL-201ENST00000322723 ARMS2P0C7Q2 107 aa9.25□□□□□ -0.93
NCL-201ENST00000322723 ZC2HC1BQ5TFG8 222 aa9.25□□□□□ -0.93
NCL-201ENST00000322723 MRPL53Q96EL3 112 aaKnown RBP9.25□□□□□ -0.93
NCL-201ENST00000322723 TRBV7-1A0A0A6YYK4 115 aa9.24□□□□□ -0.93
NCL-201ENST00000322723 ZFAND6Q6FIF0 208 aa9.24□□□□□ -0.93
NCL-201ENST00000322723 CNFNQ9BYD5 112 aa9.24□□□□□ -0.93
NCL-201ENST00000322723 AAMDCQ9H7C9 122 aa9.24□□□□□ -0.93
NCL-201ENST00000322723 HBDP02042 147 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms