RNA–Protein interactions for RNA: ENST00000316763.7

VRK3-201, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK3, Length 1,938 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-201ENST00000316763 RBAKDNA6NC62 111 aa10.9□□□□□ -0.66
VRK3-201ENST00000316763 LINC01548A6NM66 108 aa10.9□□□□□ -0.66
VRK3-201ENST00000316763 SYS1-DBNDD2H3BUS1 97 aa10.9□□□□□ -0.66
VRK3-201ENST00000316763 IGHV4-59P01825 116 aa10.9□□□□□ -0.66
VRK3-201ENST00000316763 CSN3P07498 182 aa10.9□□□□□ -0.66
VRK3-201ENST00000316763 PRSS3P2Q8NHM4 247 aa10.9□□□□□ -0.66
VRK3-201ENST00000316763 IGHG4P01861 327 aa10.9□□□□□ -0.67
VRK3-201ENST00000316763 CRIP2P52943 208 aaPredicted RBP10.9□□□□□ -0.67
VRK3-201ENST00000316763 IGFL4Q6B9Z1 124 aa10.9□□□□□ -0.67
VRK3-201ENST00000316763 Q6YL49 198 aa10.9□□□□□ -0.67
VRK3-201ENST00000316763 FER1L6-AS1Q8NA97 138 aa10.9□□□□□ -0.67
VRK3-201ENST00000316763 Q8TAT8 98 aa10.9□□□□□ -0.67
VRK3-201ENST00000316763 TMEM191AQ9H0A3 160 aa10.9□□□□□ -0.67
VRK3-201ENST00000316763 AP5S1Q9NUS5 200 aa10.9□□□□□ -0.67
VRK3-201ENST00000316763 ZFHX3Q15911 3703 aa10.89□□□□□ -0.67
VRK3-201ENST00000316763 ANK3Q12955 4377 aaKnown RBP10.89□□□□□ -0.67
VRK3-201ENST00000316763 TRAV41A0A0B4J266 112 aa10.89□□□□□ -0.67
VRK3-201ENST00000316763 OR4C46A6NHA9 309 aa10.89□□□□□ -0.67
VRK3-201ENST00000316763 FAM223BA6NKX1 122 aa10.89□□□□□ -0.67
VRK3-201ENST00000316763 FABP5P3A8MUU1 101 aa10.89□□□□□ -0.67
VRK3-201ENST00000316763 HLA-DMBP28068 263 aa10.89□□□□□ -0.67
VRK3-201ENST00000316763 BATFQ16520 125 aa10.89□□□□□ -0.67
VRK3-201ENST00000316763 C19orf54Q5BKX5 351 aa10.89□□□□□ -0.67
VRK3-201ENST00000316763 FAM104BQ5XKR9 115 aa10.89□□□□□ -0.67
VRK3-201ENST00000316763 PET117Q6UWS5 81 aa10.89□□□□□ -0.67
VRK3-201ENST00000316763 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.89□□□□□ -0.67
VRK3-201ENST00000316763 FAM223AQ8IWN6 122 aa10.89□□□□□ -0.67
VRK3-201ENST00000316763 MTORP42345 2549 aa10.89□□□□□ -0.67
VRK3-201ENST00000316763 ZNF138P52744 262 aa10.88□□□□□ -0.67
VRK3-201ENST00000316763 FN1P02751 2386 aaKnown RBP10.88□□□□□ -0.67
VRK3-201ENST00000316763 NSD1Q96L73 2696 aaPredicted RBP10.88□□□□□ -0.67
VRK3-201ENST00000316763 TMEM213A2RRL7 107 aa10.88□□□□□ -0.67
VRK3-201ENST00000316763 CLPSL1A2RUU4 121 aa10.88□□□□□ -0.67
VRK3-201ENST00000316763 IGHG2P01859 326 aa10.88□□□□□ -0.67
VRK3-201ENST00000316763 ORM1P02763 201 aa10.88□□□□□ -0.67
VRK3-201ENST00000316763 IGF1P05019 195 aa10.88□□□□□ -0.67
VRK3-201ENST00000316763 SRD5A1P18405 259 aa10.88□□□□□ -0.67
VRK3-201ENST00000316763 COL5A1-AS1Q5SY13 56 aa10.88□□□□□ -0.67
VRK3-201ENST00000316763 ORMDL3Q8N138 153 aa10.88□□□□□ -0.67
VRK3-201ENST00000316763 MRPL53Q96EL3 112 aaKnown RBP10.88□□□□□ -0.67
VRK3-201ENST00000316763 U3KQK5 164 aa10.88□□□□□ -0.67
VRK3-201ENST00000316763 HSBP1L1C9JCN9 74 aa10.87□□□□□ -0.67
VRK3-201ENST00000316763 ZNF80P51504 273 aaPredicted RBP10.87□□□□□ -0.67
VRK3-201ENST00000316763 BLCAPP62952 87 aa10.87□□□□□ -0.67
VRK3-201ENST00000316763 MAJINQ3KP22 176 aa10.87□□□□□ -0.67
VRK3-201ENST00000316763 LINC00173Q6ZV60 143 aa10.87□□□□□ -0.67
VRK3-201ENST00000316763 OR10AG1Q8NH19 301 aa10.87□□□□□ -0.67
VRK3-201ENST00000316763 PRELID3AQ96N28 172 aa10.87□□□□□ -0.67
VRK3-201ENST00000316763 VPREB3Q9UKI3 123 aa10.87□□□□□ -0.67
VRK3-201ENST00000316763 MRPS16Q9Y3D3 137 aaKnown RBP10.87□□□□□ -0.67
VRK3-201ENST00000316763 D6R8Y8 96 aa10.86□□□□□ -0.67
VRK3-201ENST00000316763 IGLL1P15814 213 aa10.86□□□□□ -0.67
VRK3-201ENST00000316763 ERCC8Q13216 396 aa10.86□□□□□ -0.67
VRK3-201ENST00000316763 TWIST1Q15672 202 aa10.86□□□□□ -0.67
VRK3-201ENST00000316763 SPATA12Q7Z6I5 190 aa10.86□□□□□ -0.67
VRK3-201ENST00000316763 ST20Q9HBF5 79 aa10.86□□□□□ -0.67
VRK3-201ENST00000316763 TEP1Q99973 2627 aaKnown RBP10.86□□□□□ -0.67
VRK3-201ENST00000316763 IGHV3-66A0A0C4DH42 116 aa10.86□□□□□ -0.67
VRK3-201ENST00000316763 TRGV3P03979 118 aa10.86□□□□□ -0.67
VRK3-201ENST00000316763 IGLC6P0CF74 106 aa10.86□□□□□ -0.67
VRK3-201ENST00000316763 TSPOP30536 169 aa10.86□□□□□ -0.67
VRK3-201ENST00000316763 AMN1Q8IY45 258 aa10.86□□□□□ -0.67
VRK3-201ENST00000316763 LAMTOR2Q9Y2Q5 125 aa10.86□□□□□ -0.67
VRK3-201ENST00000316763 U3KQE9 123 aa10.86□□□□□ -0.67
VRK3-201ENST00000316763 CRLF1O75462 422 aa10.85□□□□□ -0.67
VRK3-201ENST00000316763 TMEM78Q5T7P6 136 aa10.85□□□□□ -0.67
VRK3-201ENST00000316763 RNF182Q8N6D2 247 aa10.85□□□□□ -0.67
VRK3-201ENST00000316763 ZNF580Q9UK33 172 aa10.85□□□□□ -0.67
VRK3-201ENST00000316763 PRAC2D3DTV9 90 aa10.84□□□□□ -0.67
VRK3-201ENST00000316763 HOXA3O43365 443 aaPredicted RBP10.84□□□□□ -0.67
VRK3-201ENST00000316763 HIST1H1AQ02539 215 aaPredicted RBP10.84□□□□□ -0.67
VRK3-201ENST00000316763 LINC01559Q495D7 138 aa10.84□□□□□ -0.67
VRK3-201ENST00000316763 MRPL51Q4U2R6 128 aaKnown RBP10.84□□□□□ -0.67
VRK3-201ENST00000316763 Q6ZS46 218 aa10.84□□□□□ -0.67
VRK3-201ENST00000316763 ZNF207O43670 478 aaKnown RBP10.84□□□□□ -0.67
VRK3-201ENST00000316763 ZNF25P17030 456 aaPredicted RBP10.84□□□□□ -0.67
VRK3-201ENST00000316763 CKS2P33552 79 aa10.84□□□□□ -0.67
VRK3-201ENST00000316763 ARL3P36405 182 aa10.84□□□□□ -0.67
VRK3-201ENST00000316763 IFI27P40305 119 aaPredicted RBP10.84□□□□□ -0.67
VRK3-201ENST00000316763 C8orf86Q6ZUL3 223 aa10.84□□□□□ -0.67
VRK3-201ENST00000316763 SIGLEC8Q9NYZ4 499 aa10.84□□□□□ -0.67
VRK3-201ENST00000316763 TIMM8BQ9Y5J9 83 aaPredicted RBP10.84□□□□□ -0.67
VRK3-201ENST00000316763 IGHV3OR16-13A0A075B7E8 117 aa10.83□□□□□ -0.68
VRK3-201ENST00000316763 IGHV3-74A0A0B4J1X5 117 aa10.83□□□□□ -0.68
VRK3-201ENST00000316763 H3BUA1 57 aa10.83□□□□□ -0.68
VRK3-201ENST00000316763 BRI3O95415 125 aa10.83□□□□□ -0.68
VRK3-201ENST00000316763 SCGB2A2Q13296 93 aa10.83□□□□□ -0.68
VRK3-201ENST00000316763 CNFNQ9BYD5 112 aa10.83□□□□□ -0.68
VRK3-201ENST00000316763 IGHV3-49A0A0A0MS15 119 aa10.82□□□□□ -0.68
VRK3-201ENST00000316763 MUC21A0A0G2JKD1 596 aa10.82□□□□□ -0.68
VRK3-201ENST00000316763 MUC21A0A140T8X8 626 aa10.82□□□□□ -0.68
VRK3-201ENST00000316763 LOC389332A0A1B0GUA5 103 aa10.82□□□□□ -0.68
VRK3-201ENST00000316763 PPBPP02775 128 aa10.82□□□□□ -0.68
VRK3-201ENST00000316763 PPIFP30405 207 aaKnown RBP10.82□□□□□ -0.68
VRK3-201ENST00000316763 MUC21Q5SSG8 566 aa10.82□□□□□ -0.68
VRK3-201ENST00000316763 LINC01545Q5VT33 79 aa10.82□□□□□ -0.68
VRK3-201ENST00000316763 USMG5Q96IX5 58 aa10.82□□□□□ -0.68
VRK3-201ENST00000316763 ZNF747Q9BV97 191 aa10.82□□□□□ -0.68
VRK3-201ENST00000316763 AGPAT4-IT1Q9H0P7 198 aa10.82□□□□□ -0.68
VRK3-201ENST00000316763 MS4A6AQ9H2W1 248 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms